Vibrio cholerae O27 10432-62: VAB027_118
Help
Entry
VAB027_118 CDS
T03829
Name
(GenBank) HDOD domain protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VAB027_118
Enzymes [BR:
vcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VAB027_118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
HDOD
DUF4327
Motif
Other DBs
NCBI-ProteinID:
AKB06097
UniProt:
A0A0E4C3S5
LinkDB
All DBs
Position
123976..125202
Genome browser
AA seq
408 aa
AA seq
DB search
MYTTYVARQPILNAKRHTLGYELLFRDGEKNAFPEYMDADRATYRLIVENFLSLGTNPRI
ARSRCFINFPHKSLIRRLPLTLPREQIVVEILETCQPTDDLFEAVQELSQRGYLLALDDF
VYSPAWERFLPYVQIVKIDIMAMGLDKACEFVRGRLAQGSRRRFLAERVETEDEFHQARH
AGFTFFQGYFFSKPEIIKQRYVSPEHVIAMQLFREVCQPEVDYVRVERLVAQDIALSYKL
LRFVNTMSDRISVSISSFRQALVYLGQDKLRIFVSLAVASYISSKKPKELYNLSLQRAQF
CQLMATHPHFKAHREQAFLIGMFSVLDALLDTSIEQLVEQLPLADDVKLALREREGPLGT
LLDLEECFEKADWQGVEQHCLELGFDLEDVRQELIEAQRWSQDINRLI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtacacaacttatgtagcacgccaaccgatattgaatgcaaagcgacacacgctaggt
tatgagctgctgtttcgagatggagagaaaaacgcgtttcctgagtacatggatgccgat
cgtgctacctaccgtctgatcgttgaaaactttttatcccttggtaccaacccgagaatt
gcccgctcgcgctgttttatcaactttccccataaaagcttaattcggcgtttgcctctg
actctgccgcgtgagcagatcgtggtagaaattttggaaacgtgccaaccgaccgatgat
ctttttgaggcggtacaagagcttagccagcgaggttatctgctcgcgttagatgatttt
gtgtattcacccgcttgggagcgctttttaccctacgtacagatagtcaaaatcgacatc
atggcaatggggctcgataaagcgtgtgaatttgtgcgtggtcgtctggctcagggaagt
cgtcgccgatttttggcagaacgagtcgaaaccgaagatgagtttcatcaagcgcgtcat
gcgggttttaccttcttccaaggctattttttcagtaagccagaaatcattaaacagcgc
tacgtcagtccagagcatgtgattgccatgcaactgtttcgcgaagtctgtcagcctgaa
gtcgattatgtgcgagtagagcgcttggtcgcgcaggacattgcgctctcctacaagctg
ctgcgtttcgtaaacactatgtcggatcggatctcggtctccatctcctcatttcgccaa
gccttggtttatcttggacaggacaaactgcgcattttcgtctctttggcggtcgcgtct
tatatctcctccaaaaagcccaaggagctttacaacttgtcgctacaaagagcgcagttt
tgccagttgatggcgacgcatccacattttaaagcgcatcgtgaacaagcgtttctgatt
ggcatgttttctgtgctggatgccttgctcgatacctcaattgagcaattggtggagcaa
ctgccgctggccgatgatgtgaagttagcactgcgagagcgtgaagggccactgggtact
ttgctcgatcttgaggagtgttttgaaaaagccgattggcaaggtgtggagcagcactgc
ctagaactgggttttgatctggaagatgtccgtcaggaattgattgaagcccagcgttgg
agccaggacatcaatcgattaatttag
DBGET
integrated database retrieval system
