Vibrio cholerae O27 10432-62: VAB027_2299
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Entry
VAB027_2299 CDS
T03829
Name
(GenBank) bacterial regulatory s, luxR family protein
KO
K13246
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VAB027_2299
Enzymes [BR:
vcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VAB027_2299
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Reovirus_L2_7th
HTH_23
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
AKB08553
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Position
complement(2505463..2507217)
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AA seq
584 aa
AA seq
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MKIMIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVGIDLMFCDIRMPQMDG
ISLLSQLSLQAPKLGVIILSAVEDTILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVVEG
VQKQTEPKTSHKPAITLTCDEIEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTH
GMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIGADLQLSVNISQRNLQHSICDPIL
AICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQ
LPFTELKIDRSFVHDLATNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVD
TCQGYYAAKPMPIAQLSELYTKNRRQRLGGQSMDDGWQILLVDNHMLSATALQKVLNKEE
NVSKVFVAQDIEQTLHKLRDLPINLLVVESRFLSTISPAAFHELLEPYYRGAVLVLHDGL
TAEAQPDEPKAIVVKANTLMETSSRILQQAQQSTVRPQAQQEKLAQLSERELTVAKMLVE
GLTNKEIALQLEINQKTVSTYKTRIMTKLGIKSAMELVRFVTLK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatgatagtagaagatgatcgaattcaggcgacgagcctgaagctcaagcta
agacagcttgggttggatgacgtcatcttggctgaaaacggatttgctgccttagaactg
tgtaacaaagtgggtatcgatttgatgttttgcgatattcgaatgccgcagatggatggg
atcagcttgttatcacaactgagtttacaggcacctaagctgggtgtgattatactcagc
gcggtggaagatacgattcttgagttaactcacaacatgtgtagtttggctggatttgct
tatgttgatcgcctacctaagccctacgaagtggaggatttacagcgtgttgtcgagggg
gttcaaaagcaaacggagcctaaaaccagtcacaaacctgcaatcacgctaacctgtgac
gagattgaacaagcttttctgcacgaccatatttttaattactatcaaccacagtttgat
tttcgcagtggggcgatggtcggcgttgaagcgctagtacgttacgagcatcccactcat
ggcatgttaagtccagcggtgtttctgcctttaattgagcagtgtggcttgcatgagaaa
ctcttccttaccgtattagaaaagtcggtctctgcattggctagtattggtgctgacttg
cagctttccgtcaacatcagccaacgcaacttgcaacactcgatctgtgatcctattctc
gccatctgtgagcggtatggttttcccgcaagcaaactgactctagagatgacggagcat
gaggtgtacaacggaaccccgacctcattggctaaccttgctcgactgagaatgtatggc
gttgggctatcgattgatgattttggtacgggctacgcgtcattaggtcaactggctcaa
ctgccttttacggaactcaagattgatcgcagctttgtgcatgatttagcaaccaactac
aaacaccaacaattgaccaatatgtgtttgttgctggctcaatctttggggttgcactgc
gtcgtcgaaggggtagagaacgaagagacatggcaatacttacgtcaacttggggtagat
acctgccaaggttactacgccgctaagcccatgccgattgctcagttgagcgagctttac
actaaaaatcgtcgccaacgtttaggtggtcaaagtatggatgatggctggcaaatcttg
ctggtggataaccatatgctcagcgccacggcattacaaaaagtgctcaataaagaagag
aacgtcagcaaggtgtttgtggcacaagatattgagcagacgctgcacaaactgcgcgat
ttaccgatcaacctgctggtcgtcgaaagtcggtttttatcgacaatcagtcctgcggca
tttcacgagttgcttgagccttactatcgaggggctgtcttggtgctgcatgatggatta
accgctgaggctcaaccggatgagcccaaagccatcgtcgtcaaagcgaatactttgatg
gaaaccagttctcggatcttacagcaagcgcagcagagcactgtgcgcccacaggcgcaa
caagaaaagcttgctcagctttctgagcgagagttgacggttgcgaaaatgttagtagaa
gggctgacaaataaggaaatcgccctacaactcgaaatcaatcaaaaaacagtaagcact
tacaagactaggattatgaccaagttagggattaaatcggccatggagttggtgcgtttt
gtaacattaaaatag
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