Verticillium dahliae: VDAG_10033
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Entry
VDAG_10033 CDS
T03450
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
vda
Verticillium dahliae
Pathway
vda03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VDAG_10033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_10033
Enzymes [BR:
vda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VDAG_10033
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
VDAG_10033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
20711496
NCBI-ProteinID:
XP_009654085
UniProt:
G2XIQ1
LinkDB
All DBs
Position
4
AA seq
1702 aa
AA seq
DB search
MNISQPISSTVETVEFTFLTETEIRAISVKRIENDSTFDNLLNPVPGGLYDPALGSWGDS
ICSTCNLNQSSCPGHAGHIELPVPVYHPVFLDQVLRLLRAQCVYCKGLRLRQRDVHLYSC
KLRLLQHGLLQAAHLIDAVGEDFQGLQIPGVTETAEAEEEGSGADNLIRAREFFVKRQLK
EHKATVGDVRKGKHEGALEIRRELIKEFMAAIPKPKKCDTCGGISPPYRKDAFVKIFEKP
LSERDAAKMAQTNLRIRDAMTAATPVSKTKWNGYTSDEAIADVDSSASDADGDVNMAEPD
SGSSSESEGQAAKVSGGQTKASARSQRYITAMEVRERLRELFDKEQEVLSLIYNSKPLKK
KAGKVSADMFFLQTLLVPPNRFRPEARTGDSEISEAQQNSLYKLVLRSCGTIARVHQSIG
GATTERRARTMTDLHQAWTDLQNAVNSLIDKDKNPVMGAAAKRNEEGIKQKLEKKEGLFR
KNMMGKRVNFAARSVISPDPNIETNEIGVPPVFARKLTFPEPVTSHNFRDMQRAVINGVD
KWPGAAAIEYENGQITNLRGKSADDRISLANQLLAPTDSNMSSVRNKKVYRHLTNGDVVL
MNRQPTLHKPSIMGHRVRVLPGEKTIRMHYANCNTYNADFDGDEMNMHFPQNEVARAEAL
QIADTDHQYLSGTAGKPLRGLIQDHISVSVSLCSRDSFFTRGDFQQLVYAALRPESGHIL
GERLELVPPAIIKPVPRWTGKQVITTILKNIKPPTGEGIWMSGKTQTPADRWGKGSEEGI
VLFQDGHFLHGILDKAHLGPSSGGLIHSVHEVYGPAIAGKLLSSLGRLLTRYLNMRAFTC
GMDDLRLTPEGEQTRRDTLREASDIGLQVATKYVSLGDSNPTSTDAELLIRLEEVMRDDN
KQEGLDMLMNQRSGELSQAITKACLPSGLVKQFPKNQMQAMTVSGAKGGPVNANLISCNL
GQQVLEGRRVPLMVSGKSLPCFKPFDSSVRAGGYIVQRFLTGIRPQEYYFHHMAGREGLI
DTAVKTSRSGYLQRCIIKGMEGLTVSYDSTVRDADGTLIQFLYGEDGLDPTKQKYLTDFG
FILRNIESESAQLGFSSDFRETLAGNKDNILKHMKSAIKYAKAGKVGGKDPVISMVNPAR
VAFATSEKFYESMTEYIKENKDGLVREKGEKRPATSFIPSVSKKSAELVLAAKYMRSLVE
AGEGVGIVAGQSIGEPSTQMTLNTFHLAGHSAKNVTLGIPRLREILMTASKTISTPSMTL
FPIAELSAAECEVFQKSISVLPLAHVLDVASVNERAGKGKDGSLHRLYDVRLEFFPSEEY
TKAYAIEAADVLAAVEKKFLGHLLKMMLKEIRKKTMMSSAATPVVGSKAGAVEMVTGSGA
RPAPRDEDEDEDDATNAKQRANRSEAISYGPNDDDDDAVQNQMDREASPDEDEGFGGSPP
PAGARRSSGNNDDDDDNGQSSEDEDSGRAERVKERHAHVTRFRSDEVSGKWCEFTLEFDA
NTPKLLLLDIVQAAVKKTVVQELPGVGACTLVFDHKVTDPETGKEKDVPAIHTSGANLRI
MQKYSDYINPNKTTTNDIAAVLDVYGVEACRSNIVLELGNVFGGHGISVDNRHLNLIADY
MTRNGGYTPFNRNGLRGNVSPFTKMSFETTLAFLKDAVLDGDWDDLTTPSSRLVMGRLGK
TGTGAFDVLTKLPTRHSISAAE
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctcgcaacctatctcgtccaccgtcgagacggttgaatttacctttcttacc
gagacggagatcagagcaatctcggtcaagaggatcgaaaacgacagcacattcgacaat
cttctgaacccggtccccggaggcctctatgacccagctcttggctcctggggtgactct
atctgctcgacatgtaacctcaatcaatcctcctgtccgggccacgcgggccatatcgag
ctcccagttccagtctaccaccccgtattcttggatcaagtcctgcggctactacgggcg
caatgcgtttattgcaaaggcctccgcctccgtcaacgcgacgttcacctgtactcgtgc
aagctgcgactcctacagcatggtctgctccaagctgcccacctgatcgatgccgtcgga
gaggatttccagggccttcagatccctggtgtgaccgagactgccgaagcggaagaggag
ggcagtggtgccgacaatctcatccgggcccgggagttcttcgttaagcgccaacttaaa
gaacacaaagccactgtcggtgatgtgcgtaaaggaaaacacgaaggtgcgctggagatt
cgcagagagctcattaaggaatttatggctgcgattccgaagccaaagaaatgcgacact
tgcggaggcatctcgcctccctacaggaaggacgccttcgtcaaaatctttgagaagcct
ctatccgagcgagatgccgcaaagatggcgcaaaccaaccttagaatcagagacgccatg
accgcagcgacgccagtgtccaagacaaaatggaatggatatacatcggacgaggccatt
gctgatgtggactcctcagcatccgacgctgacggggatgtcaacatggccgaacccgac
tccggctccagctccgaaagcgagggacaggctgccaaggtgtctggaggccaaacaaaa
gcttctgcgcgcagccaacgatacatcacggccatggaagtacgagagcgcttgcgagag
ctattcgacaaggagcaggaggttctgtcgcttatttacaactcaaagcctctcaagaag
aaggccggaaaagtttctgcggacatgttcttcctacagacgctcctggtccctcccaat
cgattcagaccggaggcccgtacaggtgactcggagatctctgaagcgcaacagaactcg
ctgtacaagctagtgctccgaagctgcgggacgattgcccgtgtccaccagagcatcggt
ggcgcgacgaccgagcgacgtgcaaggacaatgacggacttgcaccaagcgtggaccgat
ctacagaacgctgtcaactcactgatcgacaaagataaaaaccccgtgatgggtgccgcc
gccaagaggaacgaagagggcatcaaacagaagctggaaaagaaagaaggcctcttccgc
aaaaacatgatgggcaagcgtgtcaacttcgctgctcgtagtgtcatttcaccagacccc
aatatcgagaccaacgagattggtgtgcctcctgtcttcgcacggaagctgacgtttccc
gagcccgtcaccagtcacaatttcagagacatgcagcgagctgtaatcaacggcgtcgat
aagtggcccggcgcggcagctatcgaatacgaaaacgggcagatcaccaacctccgaggc
aagtcggcggacgaccgaatttccttggccaaccagcttctcgcgccaaccgatagcaac
atgagtagtgttaggaacaagaaggtgtaccgacatcttacaaacggagatgtcgtgctc
atgaaccgtcagccgacattgcacaagccctccatcatggggcatcgtgtacgtgtgctg
cctggggagaagacgattcgaatgcattatgccaactgcaatacatacaatgccgacttc
gacggagacgaaatgaacatgcactttccgcaaaacgaagtggctcgcgcagaggcgctg
cagattgcagacaccgaccaccagtacctttcaggtactgccggaaaaccacttcgaggt
ctcattcaggatcacatttcagtttcggtctctctgtgtagtagggactcgttctttaca
cgcggtgatttccagcagctagtttatgccgctcttcggcccgagagcgggcacattctc
ggcgaacgcctcgaactcgtccctcctgccatcatcaaaccagtcccaagatggacggga
aagcaggtcatcacaaccattctcaagaacatcaaaccaccgactggcgagggcatctgg
atgagtggcaagactcagacacccgccgatcgctggggtaaaggctctgaagagggcata
gttcttttccaggacggtcacttcctgcacggcatactcgacaaggcacaccttggtcca
agctctggcggtctcattcattctgttcacgaggtgtatggccctgctattgctgggaag
cttcttagcagtctcggcagacttcttacgagatatttaaacatgcgagccttcacttgc
ggcatggatgacttgaggctcacacccgagggagaacaaactcgacgagacacgctcagg
gaggccagtgacattggactacaagtcgcgactaagtatgtctctctcggagacagcaac
cctaccagcacggatgctgaactactcatccgcctcgaggaggtcatgcgcgacgacaac
aagcaagaaggcttggatatgctcatgaaccaacgcagcggcgagctttcacaggccatc
acaaaggcctgccttccgagtggtctggtgaagcagtttcccaaaaaccagatgcaagcc
atgaccgtgtctggagcgaagggtggaccagtcaacgcgaacctcatctcgtgcaacctg
gggcagcaggtcttggagggcagaagagtgccattgatggtcagtggcaagtcactgccc
tgcttcaaaccgtttgactctagtgtccgggccggcggctacattgtgcagcgcttcctg
actgggattcggccacaagagtactactttcaccacatggccggacgcgaaggtttaatt
gacactgccgtcaaaacatctcgttccggttacctccaacgctgcattatcaagggcatg
gaaggattgacagtctcctacgactctactgtccgcgatgcagacggcacgctgattcag
ttcttgtacggtgaggatggcctggatcccaccaagcaaaagtacttgacagatttcggc
ttcatcctccgcaacatcgagtcagagtcggcgcagctgggctttagcagcgacttccgg
gagacgctggccggcaacaaggacaatatcctgaaacacatgaagagcgccatcaagtac
gccaaggcgggcaaggttggaggcaaggaccctgtcatctccatggtcaaccccgcccga
gttgcctttgccacgtcggagaagttttacgagagcatgacagaatacatcaaagagaac
aaggatggcctagtgcgcgagaagggagagaagcgccctgctacgtccttcattcccagc
gtgagcaagaaatctgcagagcttgtgcttgccgccaagtacatgcggtcgctggtcgaa
gctggcgagggtgtcggcattgtggccggccaaagtatcggtgagccatcgacacagatg
actttgaacaccttccacttggctggtcactccgctaagaacgtcacgcttggtatccct
cgcctgcgagaaattctcatgactgcgagcaaaacaatatcaaccccgtccatgacgctc
ttccctatcgctgaactctcagcggcagagtgcgaggtcttccagaagtccatcagtgtg
ctacccctggcacacgtgctcgatgtggcgtctgtgaacgagcgagccggcaagggcaag
gacggctcgctgcaccgactttacgatgttcgtctcgagttcttcccatccgaagagtac
accaaggcatatgctatcgaggcagcagatgtgctggctgctgtcgagaagaagttcttg
ggccatctgctcaagatgatgctcaaagaaatcaggaagaagacgatgatgtcgagtgca
gcaacaccagtcgtgggcagcaaggctggcgcggtcgagatggtgaccggctcaggagca
cgccccgccccgcgtgacgaggacgaggatgaggatgacgcaaccaacgccaagcagcgt
gccaaccgctctgaggctatttcgtacggacctaacgacgacgacgatgacgctgtgcaa
aaccagatggatcgcgaggcatcccctgacgaggatgaaggctttggaggaagccctcct
ccggctggtgcgagacgcagcagcggcaacaacgacgacgacgacgacaatggacaatct
tccgaggacgaagacagcggcagggctgagcgtgtgaaggagcgccatgctcatgtgaca
agattccgcagtgacgaagtgtcgggcaagtggtgcgagttcacgctcgaattcgatgcc
aatacacccaagctgcttctactcgacattgtacaggctgctgtcaagaagaccgttgtg
caagagctgcccggtgtgggagcttgtacacttgtcttcgaccacaaggtcaccgatccg
gagacgggcaaggagaaagatgtgccagcgatccatacgtctggcgccaatctccggatc
atgcagaagtacagcgactatatcaacccgaacaagacgacgacgaacgacattgctgca
gttttggacgtgtacggtgtggaagcttgccgcagcaacatcgtgctcgagctcggcaat
gtattcggaggtcacggcatctctgttgataatcgccatctcaacctcattgccgactac
atgacgagaaatggtggctacacgcctttcaaccgcaatgggctccgcggtaatgtcagc
ccgttcaccaagatgagcttcgagactacgctggctttcctcaaggacgctgtgttggat
ggcgactgggacgatctgacgacgcccagtagccgtcttgtcatgggacgtctgggcaag
acaggaacgggggccttcgatgtgttgacgaagctgccgacgcggcactcgatttctgcg
gcagaatga
DBGET
integrated database retrieval system
