KEGG   Vibrio diabolicus: AL552_11700
Entry
AL552_11700       CDS       T05332                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vdb  Vibrio diabolicus
Pathway
vdb00740  Riboflavin metabolism
vdb01100  Metabolic pathways
vdb01110  Biosynthesis of secondary metabolites
vdb01240  Biosynthesis of cofactors
vdb02024  Quorum sensing
Module
vdb_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    AL552_11700 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AL552_11700 (ribD)
Enzymes [BR:vdb01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     AL552_11700 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     AL552_11700 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD HPS6
Other DBs
NCBI-ProteinID: AVF94421
LinkDB
Position
1:587204..588331
AA seq 375 aa
MTQHTPERAFSDLDFAMMSRAIKLARRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGEP
HAEVHAMRMAGEKAVGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAG
RGIQMLRDAGIEVQIGLLEQDALALNPGFIKYMRTGMPFVQLKMAASLDGQSALSNGQSQ
WITSPAARQDVQRYRAMSGGILSTSKTVIDDNASLNVRWDDLPTSVQAQYLREELRQPVR
VILDRQNHLTDALKLFHTDGERVIVSPDGDSIPLLDSADQIDLSTTLKRISDEHHINHLW
VEAGATLASAMIKANLVDELIVYLAPKLMGSDGRGLIGALGLSAMADVTDLNITDVRMVG
VDIRITATIKRKELR
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgactcaacacactcctgaaagagcgttttctgatttagatttcgccatgatgtcacga
gctattaagttagcgagacgtggcatttataccaccgccccaaatccaaatgtggggtgc
gtcatcgttcgtgatgaagaaattgttggtgagggctatcaccaccgcgctggtgagccg
catgccgaagtgcacgcgatgcgcatggcgggtgaaaaagcagttggtgcaaccgcttat
gtgacgctcgaaccttgctctcattacggccgtacaccgccatgtgctgaagggctaatc
aaagccaaagtggctcgtgtggtttgcgcaatggtagacccaaaccctaaagttgcgggg
cggggcatccagatgttgcgtgatgccggaattgaagtacaaatcggcttgttagagcaa
gatgcccttgcccttaaccctggttttataaagtacatgcgtacaggcatgccgtttgtt
caattaaaaatggcagccagtttggatgggcaaagcgcactcagcaatgggcagagccaa
tggatcacctccccagcggcccgccaagatgtgcagcgttatcgagcgatgagtggtggc
attctctctaccagcaaaacggtgattgatgataatgcgtcactcaatgtgcgttgggat
gacttacctaccagtgttcaagcgcagtatttacgagaagaacttcgtcaaccagtacgt
gtaatcttagaccgtcagaaccatttaacggatgcgctcaagctgttccacaccgatgga
gagcgagttattgttagcccagatggagacagtatccctctattggacagcgctgaccaa
attgacttatcaacaacattaaaacgtatctcggatgagcaccacatcaatcacttatgg
gttgaagctggagcaacgctagccagcgcgatgataaaggctaatcttgtagatgagctc
attgtttaccttgcgccaaaactcatgggcagcgatggtcgggggctgattggtgcttta
gggttaagcgctatggctgacgtcactgatttaaacattacagacgttcgtatggttggg
gtagacattcgcatcactgccaccatcaaacgtaaagaacttagataa

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