Vibrio sp. EJY3: VEJY3_19921
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Entry
VEJY3_19921 CDS
T01683
Name
(GenBank) GGDEF family protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vej
Vibrio sp. EJY3
Pathway
vej05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VEJY3_19921
Enzymes [BR:
vej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VEJY3_19921
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
AEX24401
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All DBs
Position
2:919112..921034
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AA seq
640 aa
AA seq
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MGRIQTLDYKIPDSMQKSWQEIVNLLAQIGEVPTTLIMRAHQDYLEVNTSSNTPGNPYKS
GDKESHGSGLYCEYVINNQQELIVPYAPEDEVWCSNPDIKLGMVSYSGLPLLWPNGEVFG
TICMLDSKANKFSETYLQLMSTFKDSIEAQLAVVFQQHKLLRLNHELQNRVENRTTDLAQ
LSYSLTKEIDRRKAAEKQVSYQKTHDQGTGFLNRSALEQVVEKYLQALKDDMQSLVIINI
GFSNARSIQTRYGFEAFDEILKEFHSRLSERVSSFVTGRPSSNDLVLLVSGDDVEGKLNQ
LLEEISSVSVGNFYNNRTEVYLHSYIGVVRAQRNSNAKQLLQNACYAMLLCKESGEAYRY
FSESHSNDLNNHSQLEGYLLQAVRNDDLMLYFQPKVSPTTHEWVGAEALLRWRHPVLGDV
SNEALIRMAEQNGLIFEVGLFVLRTAIAKAKQWSEMTDNFKIAVNVSPIQLQNVNFADQV
EHLLEAFHLPPRFIELEVTESALIADETLAVTTLNKLHQLGVTLSLDDFGTGFASFSYLK
KYPFDAIKVDKSFVQQMDKSENDRAIIRSIIHIVKKLELHVVVEGVESTSQEQFLIEEGC
DVVQGFLYGKPMPCNEFEQGLLSQHPLDERPTYSSEFAPK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggggagaattcagacattagattataaaatccctgactccatgcaaaaaagttggcaa
gagatagtcaacctgcttgctcaaataggtgaagtgccgaccacacttatcatgcgtgcc
caccaggactatcttgaagtaaatacctcaagcaacacgccaggaaacccttacaagtcc
ggagacaaggaatcacacggcagcggtttatattgcgagtatgtaattaataaccagcag
gagctgatagttccttacgccccagaagacgaagtgtggtgcagcaaccccgatataaaa
cttggaatggtatcctattctggccttccgttactttggcccaatggtgaggtgttcggg
actatttgtatgcttgattctaaagctaacaagttcagtgaaacgtatcttcagttaatg
agcacgttcaaagactccattgaagctcagcttgcggtggtgtttcagcaacacaaacta
ttgcgcctgaaccatgaactacagaaccgtgtagaaaacagaaccacagaccttgcgcaa
ctaagttattcattaaccaaagaaatcgatcggcgcaaagctgcagagaaacaagtaagc
tatcagaaaactcacgatcaaggcacgggattcttaaatcggtccgctttagagcaggta
gttgaaaaatatcttcaagcgcttaaagatgatatgcaatctctcgtcatcatcaatatc
ggctttagtaacgcgagaagtatacaaacacgatatggattcgaagcctttgacgaaata
ctcaaagaatttcattcgcgcctttccgaacgtgtttccagttttgttacaggaagaccg
agttctaatgacttggtgctgttagtctctggggatgatgtagagggcaagctcaatcaa
ttacttgaagagatttccagcgtaagcgtgggcaacttttacaataataggactgaggtt
tacttacactcctacatcggtgtggtcagggcccaaagaaatagcaacgccaagcaactg
ctgcaaaacgcctgttatgccatgctgttgtgtaaagaatctggggaagcataccgatac
tttagtgaaagtcattcaaacgaccttaacaaccatagccagctagaaggctatttatta
caagccgtacgtaatgatgatctcatgctctattttcagccaaaagttagccccaccacg
cacgaatgggttggcgctgaagccttattgcgttggcggcatccggtattaggtgacgtc
tccaacgaagcattgatccgaatggccgaacagaatggcttaatatttgaagtcggatta
tttgttcttcgtaccgcgatagcaaaagccaagcaatggtcagagatgacggataacttt
aaaattgcggttaatgtctctcctatccaattacaaaacgtcaactttgccgaccaggtt
gagcaccttctagaagcgtttcatctcccaccccggtttatcgaattggaagtcactgaa
agtgccttaatcgccgatgaaacacttgcggtgacgacactcaataaacttcatcagctt
ggcgtgacattgtcacttgatgactttggcaccggatttgcctcatttagttatctgaag
aagtacccatttgatgccataaaagttgataaaagctttgtacagcaaatggataaatca
gaaaacgaccgagcaattattcgctccattatccacattgtcaaaaagcttgagcttcac
gtcgtcgtggaaggtgttgagtctacaagccaggagcagtttttaattgaagaaggctgc
gacgtagtacaagggtttctctatggtaaacccatgccctgtaatgaatttgagcaaggc
ctactcagtcagcatccattagatgagcggcccacctattcgtccgagtttgcgcctaaa
taa
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