Vollenhovia emeryi: 105557903
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Entry
105557903 CDS
T06016
Name
(RefSeq) transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
vem
Vollenhovia emeryi
Pathway
vem03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105557903
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vem01001
]
105557903
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vem03021
]
105557903
03036 Chromosome and associated proteins [BR:
vem03036
]
105557903
Enzymes [BR:
vem01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
105557903
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105557903
Protein kinases [BR:
vem01001
]
Serine/threonine kinases: Other
TAF1 family
105557903
Transcription machinery [BR:
vem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105557903
Chromosome and associated proteins [BR:
vem03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
105557903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
105557903
NCBI-ProteinID:
XP_011860692
LinkDB
All DBs
Position
Unknown
AA seq
1903 aa
AA seq
DB search
MADSDEESEKDLASGLNITGFLFGNIDDNGQLEDDILDPEAKQHLASLSRLGLSSFISEM
MSSDSNAEEKENDKADDKQDKQSATANDADVDYLAKAPTALDFSDINELADDINDEISKS
NGLDKRADKENVDYDADDEEVVSKSDTQLMPPPPIPEEKEALTAEEAEAARQRRLETPLA
SMLPSKYANIDVTELFPDFRTNKVLRFSRLFGPGKPSSLPQIWRGVRKRRKKKRHQDVRD
SDSGSDQDDKKPKFKGWNMQYGPEPSAEACRSDDETKLLRPVEDKEQTGKTGESGENGDM
GPKVADWRFGPAQLWYDMLEVPETGDGFNYGFKTVEKVEDQESGKLEAKAEEFADDAFLM
VSQLHWEDDVVWNGDDIKHKVMQKLNSKNNAAGWVPSSGNRTAQAFSQPGKGAPVNVAPN
VRLATSQITTPLHMQSQKNKMNMGKGNQQQQREEDDTWYSIFPVENEELVYGLWEEEVIW
DPESMKKIPKPKILTLDPNDENIVLGIPDDIDPALLLKDNAPQPKVKIPHPHVKKSKLLL
GKAGVINVLEEDTPPPPPKSPDRDPFNISNDTYYMPKSSETTLRLKVGGGNLIQHSTPVV
ELRVPFVQTHMGPMRLRNFHRPPLRRFSHGPLAHPGPHGVLPLLKHIKKKAKQREQERIA
SGGGDVFFMRTPEDLTGRDGELVLVEFSEEHPPLMNQVGMCSKVKNYYKRRAGKDQGPQT
YRYGETAYAHTSPFLGILTPGQSIQAVENNMYRAPLYEHKIPETDFLVIRSRQQYYIREV
DALFVAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKSRDTPRRIKMDDIKKAFPS
HSESSIRKRLKLCADFKRTGMDSNWWVIKPDFRLPTEEEIRAMVSPEQCCSYFSMIAAEQ
RLKDAGYGEKFLFTPQDDDDEDMQLKMDDEVKVAPWNTTRAYIQAMKGKCLLQLAGPADP
TGCGEGFSYVRVPNKPTISKEEQEAQPKRTVTGTDADLRRLSLNNAKALLRKFGVPEEEI
KKLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQERYKEECQRIFDLQNRVL
SSNEVLSTDEGESSEEDSSDIEEMGKNIENMLSNKKTSTQLSLEREEQQRHELRKMLMGE
AQEQESKKGKESKKKDEEEDSPVNNFNAQQGRVLKIYRTFRNQEGKEYTRVELVRKPAVI
DTYLKIRNSKDESFIKQFATLDDAQKEEMKREKRRIQEQLRRIKRNQERERMHTGPAIVN
GSSINNSSNNMFDRSNTNTPPTTSSTSILPFCNFQSSTSSAPTPKHPKPEVSPPKRKKPK
LKPDLKLKCGACGNVGHMRTNKACPLYQNSIATAPVNVAMTEEQEEEIEKQLNTDDQDLV
NVDGTKVKLSSKLIKHAEEMKRRTLVLKVPKEAVGSKKRRKPPTDDHCDYLKRHQRPVNR
RRTDPVVVMSTMLESILNEMRDLPDVQPFLFPVNAKAVPDYHKIIQRPMDLQTIRENLRM
KKYQSREEFLADVNQIVENSTLYNGAKSSLTVAAKRMLDTCVERLGEREDRLMRLEKAIN
PLLDDNDQVALTFILDNVVNNKLKSMTEVWPFMKPVNKKMVKDYYNIVKRPMDLETISKK
VSAHKYHSRHEFLRDIEQILENCTLYNSKDSPLTNKAELLVKVCKDTLDEYDEHLTQLEN
NILLVQKRAMEQADIDSSWLCPDEENYTITEPEYRGSQTSSPENPFGKSNMDDFDFVDVE
GEMEADMDRNTKKKDVLEEDLQFSSEDEFDEVPFGTDEHSEQNETEALELSEVREGVVLA
DDDSQQAAEAMVQLGNVGFYMGEQQLLQQDESMDVDPNYDPSDFLLAGLPARDDKGENKI
QDDLAVSESDDDAENTAKQEVQRNQQQPQLPQPDEDDGGDLWF
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggcggattccgacgaggagagcgagaaggacctggcgtccggtctcaacatcaccggc
ttccttttcggcaacatcgacgacaacggtcagctggaggacgatatcttggatcccgaa
gccaagcaacatctagcctcgctcagtcgtctcggtctaagctcgttcatcagcgagatg
atgtccagtgacagcaacgccgaggagaaggagaatgacaaagcggacgacaagcaggat
aagcagagcgcaactgccaacgacgccgatgtagattacctggcgaaagcacccaccgcc
ctagatttttcggatataaacgagttggcggacgacataaatgatgagatctccaagagc
aatggacttgacaagagagcggacaaggagaatgtagattacgatgccgacgacgaggag
gtcgtcagcaaatcggacacgcaactgatgccaccgccgccaataccggaggagaaggag
gcattgactgcggaggaagcggaggcagcgcgccaacgtaggctggagacgcccctcgct
tccatgctgccgtccaagtacgccaatatcgacgtcaccgagctgtttccggactttcgc
accaataaggttctcagattctcacgattgttcggcccggggaagccgagcagcctgccg
cagatatggaggggcgtgagaaagcgacgcaagaagaagaggcatcaggatgtcagagat
tccgattctggctccgatcaggatgacaagaagcccaaatttaagggttggaacatgcag
tacggtcctgaaccgagtgcggaggcatgtcgctcggatgacgagaccaagctgctgcga
ccggtagaggacaaggagcagactggtaagacgggcgagagtggcgagaacggcgacatg
ggacccaaggttgctgactggaggtttggaccagctcaattgtggtacgacatgctggaa
gtgccggaaactggagatggtttcaactacggcttcaagaccgttgaaaaagtggaagac
caagagagcggcaaactggaggccaaggctgaggagttcgcagacgatgcgttcctgatg
gtatctcagctgcattgggaggacgacgtagtctggaatggtgacgacattaagcacaag
gtgatgcagaagttaaatagcaagaataacgctgccggctgggtaccatcaagtggcaat
agaactgcgcaagccttcagtcagcccggaaaaggtgcccctgttaatgtagcaccgaac
gttagactggccacctcgcaaattacaactccgttgcacatgcaatctcaaaagaacaag
atgaacatgggtaaggggaatcaacagcagcagcgggaggaggacgacacttggtattcg
atattcccggtggaaaatgaagagctcgtttacggtttgtgggaggaggaggtgatttgg
gatcccgagagtatgaagaagatcccgaaaccgaagatactcacgctggatccgaacgac
gagaatatagttctgggcataccggacgacattgatcccgctcttctcctcaaagacaac
gctccgcagcccaaggtgaaaattccgcatccgcatgtcaagaagagcaagttgctgctg
ggcaaagcgggcgtcatcaacgtcctcgaggaggacacgcccccgccaccgcctaagtcg
cccgaccgggatccgttcaacatatcaaacgatacatattacatgcccaagtcctcggaa
actacgttgcggttgaaggtcggcggcggcaatctgatacagcacagcacgccagtggtg
gagctgcgcgttcctttcgtacaaacgcacatgggtccgatgcgactgaggaactttcac
aggccaccgttgcgaaggttcagccacgggccgttggctcatccaggaccgcatggtgtt
ctaccgctgctgaagcacattaagaaaaaagctaagcaacgagagcaagagagaattgcc
tctggcggtggcgacgtgttcttcatgagaacacccgaggacctgaccggacgagatggc
gaattggtgctcgtcgaattttcggaggagcacccgccgctcatgaatcaggtcggcatg
tgctccaaagtaaagaattattacaagaggcgggccggcaaggatcaggggccacagacg
taccgatacggagagacggcttacgctcacaccagccccttcctcggaattctcacgccc
ggccagagtatccaagcggtcgagaacaacatgtacagagctccactttacgagcacaaa
attcccgagaccgatttcttagtcataagatcaagacagcaatattatattagagaagtg
gatgcgttgtttgttgccggacaggaatgcccgctctatgaagtacctggacccaactcg
aagagagcgaacaacttcgtgcgagattttctacaggtgttcatatacagattgttctgg
aagtcgcgcgacacccctcgacgaatcaagatggatgatataaaaaaggccttcccgtct
cacagcgagagtagcatcaggaagaggttgaagctgtgcgctgactttaaaagaaccggc
atggattccaattggtgggtgataaaaccggactttcgattgccaacggaggaggagatc
cgcgctatggtgtcgccggagcagtgctgctcttatttcagcatgatcgcggccgagcag
cgtctaaaggacgccggatacggcgaaaagttcctgttcactccgcaggacgacgacgac
gaggatatgcagctgaagatggacgacgaggtgaaggtggcaccgtggaacacgacgcgc
gcctacatccaagccatgaaaggaaagtgtctattgcagttggcgggtccagccgatccg
actgggtgcggcgaaggtttctcttatgtcagagtaccgaataaaccgactattagcaag
gaagagcaagaagctcagccgaagagaactgtaactggtacagacgcggacttgagaaga
ctgtccttgaacaatgcaaaagcgctactgcgaaaattcggtgtgcctgaggaggagatc
aagaagttatcgcgttgggaagtaatcgacgtggtgcgaactctgtcgacggaaaaggcg
aaggccggcgaggagggcatgacgaagttttcacgcggcaatcgcttttcaatcgccgag
caccaggagcgctacaaggaggagtgccaacgtatcttcgacctacagaatcgcgtgttg
tcgtcaaacgaagtgttgagcacagacgaaggcgagagctcggaagaggacagctcggat
atcgaagaaatgggtaagaacattgagaatatgttgtcgaacaaaaagacgagtacgcag
ctatcgctggagcgagaggagcaacagcggcacgaattacggaagatgctgatgggcgag
gcgcaggagcaggagagcaagaagggcaaggagagcaagaagaaggacgaggaggaggat
agcccggttaataacttcaatgcgcagcaaggtcgcgtactgaagatttaccgtacgttc
cgtaatcaggagggtaaggagtatacgcgagtcgagttggtgaggaaacctgctgtgatc
gacacgtacctcaagatccgcaattccaaagacgagtcgttcatcaaacagttcgccacg
ttggacgacgcgcagaaggaggagatgaagcgggagaagcgtaggattcaggagcagcta
cggcggatcaagcgaaaccaggagagggaacgtatgcacaccggaccggcgatagtgaac
ggtagcagcatcaacaattcgagcaataacatgtttgatcgcagcaacactaacactcca
cctaccacctcctcgactagtatccttccgttctgtaatttccaatcctctacttcttct
gctcccacacctaagcatcccaaaccggaggtgtcccctcccaagcgtaagaaacctaaa
ctcaagccagatctgaagcttaagtgcggcgcttgtggtaacgtcggtcacatgcgcacc
aacaaggcctgtccgctctatcagaatagcattgccacagcgccggtgaacgttgcgatg
accgaggagcaggaggaggaaattgagaagcagctaaataccgatgaccaggatctagtt
aatgtcgacggcaccaaagtgaagctgtcctcgaagctgatcaagcacgccgaggagatg
aagagacgtacattggtactcaaagtgccgaaggaggcggtgggttcgaagaagcgcaga
aaaccgcccacagacgaccactgtgactacttgaaacgccatcagaggccggttaacagg
cgcagaaccgacccggttgtcgtaatgtccacgatgttggagagcattctaaacgagatg
agagatctgccggatgtgcaaccgttcctgttcccagtcaatgctaaagcagtcccggat
tatcacaagatcatacagcggcctatggatctgcagaccatacgtgagaatttgaggatg
aaaaaatatcagagcagggaggaattcctggcggatgttaatcagatcgtggagaattcg
acgctctataacggagcgaagagctcgttgactgtggccgccaagagaatgttggatacg
tgcgtcgagaggctgggtgaaagggaggatcgtttgatgaggctggaaaaggccatcaat
ccccttctggacgacaacgaccaggtcgccctcaccttcatcttggataacgttgtcaac
aacaagttgaagtccatgacagaagtgtggccgttcatgaagcctgtgaataaaaagatg
gtgaaggattattacaatattgtcaagagaccgatggacctagaaacaatatctaaaaaa
gtgtctgcgcacaaataccacagtcgtcatgagtttcttagagatattgagcagattttg
gagaattgcacgctttataatagcaaggattctccgctcacgaataaagcggagttgcta
gttaaagtgtgtaaagacaccctagacgagtacgatgaacatttgacgcaattggaaaac
aatatactgctcgtgcagaaacgggcgatggagcaagcagacatagattcttcgtggctt
tgtccagacgaggaaaactatactatcacagagcctgaatatagaggcagccagaccagc
tctccggaaaatccatttggcaaatcaaatatggatgacttcgattttgtcgatgtggaa
ggagaaatggaagcagacatggacaggaacacgaaaaagaaggatgtgctcgaagaagat
cttcaattctctagtgaagacgagttcgacgaagtgccattcggcacggacgaacattcc
gagcaaaacgaaacggaggcgctggagctaagtgaagtcagggaaggtgtcgtattagcg
gatgatgacagtcagcaagccgccgaggcgatggtccagctaggcaacgtcggcttttat
atgggcgaacagcagctgcttcaacaagatgagagcatggacgtagatccgaattacgat
ccgtcagacttcctgttggctggtttgccggccagagacgataaaggcgagaataagatc
caggacgacctggccgtttccgagagcgacgacgacgccgagaacacggctaaacaggag
gtacagcggaaccagcagcagccacaactgccgcagccggacgaggacgacggcggtgac
ttgtggttttaa
DBGET
integrated database retrieval system
