Vibrio antiquarius: VEA_002124
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Entry
VEA_002124 CDS
T01107
Name
(GenBank) predicted signal transduction protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vex
Vibrio antiquarius
Pathway
vex05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VEA_002124
Enzymes [BR:
vex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VEA_002124
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GFIT
Motif
Pfam:
EAL
HDOD
Motif
Other DBs
NCBI-ProteinID:
ACY50287
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Position
1:544885..546108
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AA seq
407 aa
AA seq
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MNTTYVARQPIFNRKRQTLGYELLFRDGESNAYPSHIESNRATYRLIVENFLSLGTNPVI
ASSRCFINFPHQSLVRRLPRSLPKNKIVVEVLETCQPTDDLLDAIRELYREGYLIALDDF
TLTPEWRRFLPYVHIVKLDIMAMGLEKACALVKAHLAKRVKYHFLAERVETAEEFEQAKA
AGFKFFQGYFFSKPLVSQTKYVSPEQVLALQLFREVCSPEPDFTRIETIITQDVALSYKL
LRFVNTQAPNLAVEISSFRQALIYLGQDNLKQFVSLVVASYISSNKPRELYHLSLQRAQF
CQLMSRYQPFSHLNEQGFMVGLLSILDAMLDLSVESLVKQLPLSESVQQALLHRKGVYGA
LISLEECYERADWSGVEKITTQLGLSLEEVKLSLGEAVRWSQNVATA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaacgtatgttgctcgccagccgatctttaaccgcaaaagacagacgctgggt
tatgaattgttgtttcgagatggggagagtaacgcatacccttcgcatattgagtcaaac
cgagcaacataccgattaattgtcgagaatttcctatcactgggcactaacccagtgatt
gcttcttcgcgatgctttatcaattttcctcatcaaagcttggtgcgccgcttaccgcgc
agcttgccaaaaaacaaaatcgtcgtcgaagtcctggaaacttgccagccgaccgatgat
cttctcgatgcgattcgcgagttgtatcgagaaggttatttgatcgcgctggatgatttc
accttaacgccggagtggcgtcgcttcttaccttacgtgcacatcgttaaactcgatatc
atggcaatggggctggaaaaagcgtgtgcgttggtcaaagctcaccttgctaaacgcgtc
aagtaccactttttggcggaacgtgttgaaaccgcagaagagtttgagcaagccaaagcg
gctggctttaagtttttccaaggctacttttttagtaagccattagtttcgcaaacaaaa
tacgtgagccctgagcaagtgttagcgctacagctttttcgtgaagtctgctcaccagag
ccagactttactcgtattgaaaccatcattacgcaagatgtcgcgttgtcgtacaaatta
ttgcgctttgtaaatacgcaagcgccaaacctcgctgtcgaaatcagctcgtttcgtcag
gccttgatctaccttggtcaggataatcttaagcagtttgtctccttggtcgtggcgtcg
tatatctctagtaacaagcctcgagaactgtatcacctttcattacaacgagcgcagttc
tgccaattaatgtcgcgttatcagccattttcccacctcaacgaacaagggtttatggtc
ggcttattatcgattttagatgcgatgcttgatttgtcggtggaatctttagtcaagcaa
ttgccacttagcgaatccgtacaacaagccttattacatcgcaagggggtttatggtgcg
ctgatttctctcgaagagtgttacgagcgtgccgactggtcaggcgttgaaaaaatcacg
acgcagttgggattgtctttggaagaggtcaagctctcgttaggcgaagcggttcgctgg
agtcaaaacgtcgcaaccgcgtaa
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