KEGG   Vitreoscilla filiformis: VITFI_CDS2380
Entry
VITFI_CDS2380     CDS       T04960                                 
Name
(GenBank) oxidoreductase
  KO
K15461  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
Organism
vff  Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:vff00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vff03016]
    VITFI_CDS2380
Enzymes [BR:vff01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     VITFI_CDS2380
Transfer RNA biogenesis [BR:vff03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    VITFI_CDS2380
SSDB
Motif
Pfam: DAO Methyltransf_30 FAD_binding_3 NAD_binding_8 FAD_binding_2 Pyr_redox_2 AlaDh_PNT_C GIDA Pyr_redox 3HCDH_N Thi4 Shikimate_DH TrkA_N MurD-like_N HI0933_like NAD_binding_2 Pyr_redox_3 FAD_oxidored XdhC_C Lycopene_cycl NAD_binding_7 Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: ASM78158
UniProt: A0A221KGK1
LinkDB
Position
2504470..2506482
AA seq 670 aa
MKTQPLQPAQVQFDDPAHAGTPYAPAFGDVYHARAGALAQARHVFLAGNGLPGRWQACER
FVVLETGFGLGNNFLATWQAWRDDPQRCGQLVFISLEKHPLRPEDLARVHAQHALPELAQ
QLVAQWPPLTPDLHQLDFEEGRVRLLLAFGDAHTWLPELIAEVDAFYLDGFSPARNADMW
DERLIKACARLAAPGASAATWSVARNVREALSAAGFAVSRAPGFGTKRDMTVAHWPAADA
PNARPRLAPTGRQPARGMRTVLVIGAGLAGASAARALAAQGLAVTVLERREATAQETSGN
PAGIFHPVIHAHDGAHAQLLRAGSLRTAQLLRGPTERGELPGAVAGLLRGHSPEDGDVSE
ATPAAMRQLIERHGLPASFVQALSREAAQARAGHALAGPAWFYPASGWVSPSALVRHWLQ
RPGVTLRTAAPVARLLPRLGGGWCAHDAQGDLLAEADGVVLACAHELVPLLTEHSDAPHW
PLGSSRGQVTWWPPESAAATGLPRAALPVASGGYVIAPPDGALLCGATNQLRDDDPDVRD
ADHRTNLQRVAELTGQAVDVEAAMRAGPQGRVGWRLMVDDRLPLLGPVPQPWAALAGVRR
LEQPRYVPRVAGLYVLGALGSRGLSVAPLLGEALAAWITGAPQPLAGSLLDAVDVGRFVA
RRVRKGNTPA
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgaaaacccagccgctccaacccgcccaggttcagtttgacgaccccgctcacgccggc
acgccctacgccccggcgtttggtgacgtctaccacgcccgcgccggtgcgctggcgcag
gcgcggcacgtctttctggcgggcaacggtttgccggggcgctggcaggcgtgtgaacgc
tttgtggtattggagaccggcttcggcctgggcaacaactttttagcgacttggcaggcg
tggcgcgacgatccgcagcgctgcggccaactggtgttcatctcgctggaaaaacacccg
ctgcgccccgaggacctggcccgcgttcacgcccaacacgcgctgccggaattggcccag
caactggtggcgcagtggccgcccctcacgcccgacctgcatcagcttgattttgaagaa
ggccgcgtgcgcctgctgctggctttcggcgacgcgcacacctggctgcccgagctgatc
gccgaggtggatgcgttctacctcgacggtttttcccccgcccgcaacgccgacatgtgg
gatgaacgcctgatcaaagcctgtgcccgcttggccgctccgggcgccagcgccgccact
tggagcgtggcccgcaacgtgcgcgaggccctgagcgccgccggttttgcggtgagccgc
gcccccggtttcggcacgaaacgcgacatgacggtggcccactggcccgccgccgacgct
ccgaacgcccgcccacgcctggcaccgactggccgtcaaccagcgcggggaatgcgcacg
gtgttggtgatcggcgccgggttggcgggtgcatcggcggcgcgggcgctggccgcgcaa
gggctggcggtgacggtgctggagcgccgcgaggccaccgcgcaggaaacctccggcaac
cccgccggcatttttcacccggtgatccacgcgcacgacggcgcccatgcccaactgctg
cgcgctgggtcgctgcgcaccgcccaactgctgcgcggcccgaccgagcgcggtgaactg
ccgggcgcggtggccggcctgctgcgcggccacagccccgaagacggcgacgtttccgag
gccaccccggcggcgatgcgtcagctcatcgaacgccacggcttgccggcgtcgttcgtg
caggcgctgtcacgggaggcggcgcaagcgcgggccgggcacgctttggccggcccggcg
tggttttacccggccagcggctgggtgagcccgtcggcgctggtgcgtcactggctccaa
cgtccgggggtgacgctgcgcacggcggcccccgtcgcccggttgctgccccgcctcggt
gggggctggtgcgcgcacgatgcccagggcgacctcctggccgaagcggatggcgtcgtg
ctggcatgtgcgcatgaactcgtgcccctgctgacggaacacagcgacgccccccactgg
ccgctgggcagcagccggggtcaggtgacgtggtggccgcccgaatccgctgcggccact
ggcctgccgcgcgcggcgctgccggtggccagcggcggttatgtgatcgccccaccggat
ggcgccctgttgtgcggcgccaccaaccaactccgcgacgacgaccccgacgtgcgcgac
gccgaccaccgcaccaacctccagcgcgtggcggaactcaccgggcaagccgtggatgtc
gaagcggcgatgcgggcggggccgcaagggcgcgtcggctggcgcttgatggtggatgac
cgtttgccgctgctcgggccggtgccgcaaccctgggcggcgttggccggtgtgcgacgt
ttggagcagccgcgttacgtgccgcgtgtggcggggttgtacgtgctgggggcgctgggc
tcacgcggcttgagcgtggcgccgctgttgggggaggcgctggcggcgtggatcacgggt
gccccgcagccgctggcggggagtttgttggatgcggtggatgtggggcggtttgtggcg
cggcgcgtgcgcaaagggaacacgccggcttga

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