Aliivibrio fischeri ES114: VF_0025
Help
Entry
VF_0025 CDS
T00236
Symbol
fadB
Name
(GenBank) fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00071
Fatty acid degradation
vfi00280
Valine, leucine and isoleucine degradation
vfi00310
Lysine degradation
vfi00362
Benzoate degradation
vfi00380
Tryptophan metabolism
vfi00410
beta-Alanine metabolism
vfi00640
Propanoate metabolism
vfi00650
Butanoate metabolism
vfi00907
Pinene, camphor and geraniol degradation
vfi00930
Caprolactam degradation
vfi01100
Metabolic pathways
vfi01110
Biosynthesis of secondary metabolites
vfi01120
Microbial metabolism in diverse environments
vfi01200
Carbon metabolism
vfi01212
Fatty acid metabolism
Module
vfi_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VF_0025 (fadB)
00650 Butanoate metabolism
VF_0025 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
VF_0025 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VF_0025 (fadB)
00310 Lysine degradation
VF_0025 (fadB)
00380 Tryptophan metabolism
VF_0025 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VF_0025 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VF_0025 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VF_0025 (fadB)
00930 Caprolactam degradation
VF_0025 (fadB)
Enzymes [BR:
vfi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VF_0025 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VF_0025 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VF_0025 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
VF_0025 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF5546
CID_GANP
Motif
Other DBs
NCBI-ProteinID:
AAW84520
UniProt:
Q5E8X6
LinkDB
All DBs
Position
I:complement(26573..28750)
Genome browser
AA seq
725 aa
AA seq
DB search
MIYQGENLSVDYIEPGIAHLVFNAKGSVNKLNLATLQSVGEAIDALYSQKDLQGLLLSSD
KSAFIVGADITEFLGLFDIPTEELSDWLHQANAIFNRLEDIPVPTLSAITGFALGGGCEC
VLATDFRLADETASIGLPETQLGIMPGWGGSVRLPRLIGADPAMEVITTGKPKRAKDALA
LGMVDGVVSRETLITDSVTMLKKAIEGQLDWQSRRTQKKAPLKLSPLEAAMSFNVAKGMI
MKMAGKHYPAPMTAVKSIENSAFMDRDAALEVENKNFVALTQTDVAKSLVGIFLNDQLVK
SKAKQAIKNSEPVTSAAVLGAGIMGGGIAYQSASKGVPVLMKDIAQQSLDLGMSEASKLL
NKQLERGRLSGLKMAKVLSSITPSLNYASIENKDIVVEAVVENPKVKAAVLAEVENEVNE
HAILASNTSTIPISLLAKSLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSQQTIDRVVAY
ASQMGKTPIVINDCPGFFVNRVLFPYFAGFSLLLRDGGDYQQIDNVMEKEFGWPMGPAYL
LDVVGIDTAHHAQAVMAQGFPERMAKNGRDVIDAMFESDRYGQKNGSGFYAYSIDRKGKP
KKNIDESTAGIIATVTNTTQPYTSEQISARMMIPMINEVIRCLDEGIIASPAEADMALVY
GLGFPPFKGGVFRYLDAIGLTTYLDMAKEFEHLGAVYQVPESIKQKAADDECYYPAPQSL
SAPSA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcaaggtgaaaacctctctgtagactacatcgaaccgggcattgctcactta
gtatttaatgctaaaggcagtgtaaataagctcaacttagccaccctacaatcggttggt
gaagccatagatgcactctactcacaaaaggacttacaaggtctacttctatcatcagat
aaaagtgcatttattgttggtgctgatattacggagtttcttggtttgtttgatattcca
acagaagaactcagtgattggttacatcaagctaacgccatttttaatcgtctagaagac
attccagtacctactttatctgctattactggatttgctttaggaggcggttgtgaatgt
gtccttgctacggattttcgattagcagatgaaacggcatctatcggtctacccgaaaca
cagcttgggatcatgcccggctggggtggctcagtgcgcttacctcgcttaattggtgcc
gatccagcaatggaagtcatcacaacgggtaagccaaagcgagcaaaagatgccttagct
ctgggaatggttgatggtgttgtttcacgtgaaaccttgataacagattctgtcactatg
cttaaaaaagcgatagagggtcaactggattggcaatctcgtcgtacacagaaaaaagca
ccattaaaactctctcctctagaggcagcaatgtcatttaatgtcgcaaaaggcatgata
atgaaaatggcaggtaaacattaccctgcaccaatgacagcagtaaagtccattgaaaat
agtgccttcatggatcgtgatgctgctcttgaagttgaaaataaaaacttcgttgcactc
actcaaacagatgtggctaagtcattagttggtattttcttaaacgatcaattagtgaag
agtaaagcgaaacaagccataaaaaatagtgaacccgtgactagcgcagcggttcttggt
gctggaattatgggtggaggtattgcttatcaatccgcatcaaaaggcgtccctgtatta
atgaaggacattgctcaacaatcattagatttaggcatgagtgaagcctctaaactgctt
aataaacaattagaacgaggacgtttatctggtttaaagatggcaaaagtactctcttct
attaccccatcactaaactatgccagtattgaaaacaaagatattgtcgtagaagccgtc
gttgagaacccaaaggttaaagctgcagtattagctgaagttgaaaatgaagtgaatgag
cacgccatcttagcctcaaatacatcgacaatacctatttccttactagcaaaatcatta
aaacgcccagaaaatttctgtggcatgcacttcttcaatcctgtacatcggatgccactc
gttgaagtgatccgtggtgaaaaaacgtcacaacaaaccattgatcgtgttgttgcttac
gcttctcaaatgggaaaaacacctattgtcatcaatgactgccctggattttttgttaac
cgagttcttttcccttatttcgcagggttcagtttgttgctgcgtgatggtggtgactat
caacaaatagataacgtcatggaaaaagagtttggttggccaatgggaccagcttattta
cttgatgtcgttggaattgatacagcacatcacgcacaagccgtcatggcacaaggcttc
cctgagcgaatggcaaaaaatggacgagatgtgattgatgcgatgttcgaatccgatcgc
tatggtcaaaaaaatggaagtggtttttatgcatatagcatagatagaaaaggcaaacct
aaaaagaacattgatgaaagcacagcaggcattattgcgacagtaaccaatacaacgcaa
ccttatacatcagagcagatcagtgctcgcatgatgatacctatgattaatgaggtcatc
cgctgcctagatgaaggaattattgcctctcctgcagaagctgacatggcattggtttat
ggtttgggcttccctccatttaaaggaggagtattccgctatcttgatgcaattggatta
accacttatctcgacatggcaaaagaatttgaacatctaggtgccgtttatcaagtacca
gaaagcatcaaacaaaaagcagccgatgatgaatgttattacccagcgcctcaatcatta
tcagcaccgtcagcctag
DBGET
integrated database retrieval system
