KEGG   Aliivibrio fischeri ES114: VF_A0832
Entry
VF_A0832          CDS       T00236                                 
Symbol
putA
Name
(GenBank) proline dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
vfi  Aliivibrio fischeri ES114
Pathway
vfi00250  Alanine, aspartate and glutamate metabolism
vfi00330  Arginine and proline metabolism
vfi01100  Metabolic pathways
vfi01110  Biosynthesis of secondary metabolites
Module
vfi_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:vfi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    VF_A0832 (putA)
   00330 Arginine and proline metabolism
    VF_A0832 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vfi03000]
    VF_A0832 (putA)
Enzymes [BR:vfi01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     VF_A0832 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     VF_A0832 (putA)
Transcription factors [BR:vfi03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    VF_A0832 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PRODH
Other DBs
NCBI-ProteinID: AAW87902
UniProt: Q5DZ94
LinkDB
Position
II:complement(933762..936938)
AA seq 1058 aa
MSDKQEETGMFQAKEVLSSSIIEQPLESLWSAISPLYMVDEAKWLHQLLPLAKPTDREAV
MMEKHAAILIQRVRDDKKAVQMIDALLLEYSLDTKEGILLMCLAEALMRIPDAETADALI
RDKLSVADWKSHLKNSDSTFVNASTWGLLLTGKVVSMDVKADGSPSNALSRLVNKFSEPV
IRQAMNQAMKIMGHQFVLGRTIEEAQKKGLSMREKGYTYSFDMLGEAALTQTDAHKYFKD
YIMAIESVGRAASIANSPEPTVSIKLSALHPRYEVANKERVMNEMYQSVLQLLERARELD
VGITIDAEEMDRLELSLELFEKLYRSDIVKGWGKFGLVVQAYSKRALPVLVWLTALSKEQ
EDLIPLRLVKGAYWDTELKLSQQFGFARYPVFTRKEATDVSYLACARYLLSEHVKGKIFP
QFASHNAHTVAAIASMATHDEFEFQRLHGMGDALYEHAMDMFNRSVRIYAPVGSHKDLLP
YLVRRLLENGANSSFVHRLVDANCPIESLTVHPVDSLLACPSLENQLIPLPPYIFSDRKN
SYSINLDVESEAHPFERQVKEQMKTYWQGGPIVSNIRDYESMIKEHGSALHVINSPYDRG
NDVGSLVWSSQEQVSNALDIAHDYFPIWQQTPVAERADYLEALADKLEMNMPELVALCHK
EAGKTIHDSIDEVREAVDFCRYYAVQAKLNFTTAETIVGFDDISRQIERQGRGVFVCISP
WNFPLAIFLGQVTAALVAGNTVIAKPAEQTSLIAVRAIELLLETGIAPQAVHLLPGDGKT
VGAPLTSDHRVAGVAFTGSTETAQLINRTLANRSIEGEGVSPVPFIAETGGQNAMIVDST
ALPEQVVRDVIRSAFASAGQRCSALRVLFVQQDIADRIINLIKGAMAELSVGLPELHCTD
VGPVIDVRAKDKLMAHIERMTKEGVLVAQAELPNWSEKGDFVPPSAFEIESIKQLENEQF
GPILHIVRFKASDIDKVISEINSTGFGLTMGVHSRNEVTYTRIEKNIKVGNCYINRDQVG
AVVGVQPFGGQGLSGTGPKAGGPRYLIRYTKANTTTSK
NT seq 3177 nt   +upstreamnt  +downstreamnt
atgtcagataaacaagaggaaacaggtatgtttcaagcgaaagaagtattgtcctcatct
ataattgagcaaccgttagaatcattatggtctgctatttctcctctctacatggttgat
gaagccaaatggctgcaccagctattaccattagctaaaccaacagaccgtgaagccgtt
atgatggaaaaacacgcagcgatactgatacagcgtgttcgtgatgacaaaaaagcggtg
caaatgatagatgcacttttgctcgagtacagtttagatactaaggaaggcatattatta
atgtgtcttgctgaggcgctaatgcgtattcctgatgctgaaacagcggatgcattaatt
cgagataaattgagtgttgcagattggaagtctcatttaaaaaactcagattctactttt
gttaatgcttctacgtgggggcttcttttaacgggtaaagttgtatctatggatgtcaaa
gctgatggttctccatctaatgccttgagtcgactcgttaataaattttcagagcctgtg
atccgtcaagcaatgaatcaagccatgaaaataatggggcatcagtttgtgcttgggcga
accatagaagaagctcagaaaaaaggattatcgatgcgagagaaagggtatacctattct
ttcgatatgctaggtgaagcggcattaacgcaaacggatgctcataagtattttaaagat
tacatcatggctattgaaagcgttggtcgtgctgcaagtattgcgaattctccagaacca
acggtttcaatcaaattgtcagcattgcatcctcgttatgaagttgcaaataaagaacga
gtcatgaatgagatgtaccaatctgtgctgcaattattagaacgtgcacgagaattggat
gtgggtattactatcgatgcagaagaaatggatcgtttagagttatctcttgagcttttt
gaaaagttatatcgtagcgacatagtaaaagggtggggaaagttcggactggttgttcaa
gcttattcgaaacgagcgttgccggttttagtatggttaacggcgttatcaaaagaacaa
gaagacctcattccacttaggttagtaaaaggtgcctattgggatacggaattaaaatta
tctcaacagtttggatttgcacgatatcctgtctttactcgtaaagaggccactgacgta
tcttatttagcttgcgctcgttacttattaagcgagcatgtaaaaggtaagatttttcca
cagtttgctagtcataatgcacacacggttgccgccattgcctctatggcaacacatgat
gaattcgaatttcaacggctgcatggtatgggagatgcactttatgaacacgctatggac
atgtttaaccgcagtgttcgtatttatgcaccagtaggaagccataaagatttattgcca
tacctcgtaagacgtttattagagaatggagctaacagctcttttgttcatcgtttggtt
gatgcgaattgtccgattgaaagcttaacggttcaccctgttgattctttattagcgtgt
ccatcattagagaatcaattaattccgctaccgccatatattttctctgatcgtaaaaat
tcatacagcattaacttagatgttgaaagtgaagcccatccatttgaacgtcaagtaaaa
gaacaaatgaaaacgtattggcaaggtggtccaatcgtgagcaacatccgagattacgaa
agcatgatcaaggaacatggttctgcacttcatgttattaactctccttatgatcgtgga
aatgacgttggctcattggtctggagttcacaagagcaagtatccaatgcgttagatatt
gctcatgattactttcctatttggcagcaaacgccagtggcagagcgagctgattacctt
gaagctctggcagataagttagagatgaacatgcctgaacttgtcgctttatgtcataaa
gaagcaggaaaaacgattcatgatagtattgatgaagtgcgtgaggcggtggatttttgc
cgttattatgctgttcaagctaaattgaattttacaacggcagaaaccatcgttggtttt
gatgatatttctcgccaaattgaacgtcaagggcgaggtgtttttgtttgtattagccct
tggaatttccctcttgccattttcttaggtcaagtaacagcagcattagttgctggtaat
acggttatagctaagccagcagaacaaacgtcattgattgcagttcgagctattgaattg
ttgttagagacgggaatagctccgcaagcggtacatttattaccgggtgatgggaaaacc
gtcggtgctccattgacctctgatcatcgtgtggctggtgttgcttttacaggttcaact
gaaactgcacaacttatcaatcgcaccttagcgaaccggtcaattgagggggaaggggtt
tctcctgtgccttttattgctgaaacgggtggccaaaatgccatgatagtagacagtacc
gcattacctgaacaagtggtacgagatgtaatacgttcagcgtttgcttctgccggtcag
cgttgttcagctttacgtgtgttgtttgttcaacaagatattgccgatagaattatcaat
cttattaaaggggcaatggctgagctaagtgtcggattgcctgagttacactgtactgat
gttgggccagttattgatgtgcgtgcgaaagataaattgatggcgcacattgaaagaatg
acaaaagaaggtgtactggttgcacaagctgaactacctaattggtctgaaaagggcgat
tttgttccaccaagtgcgtttgaaattgaatcaattaaacaattagaaaatgaacaattt
ggtccgattcttcatattgttcgttttaaagccagtgatatagataaggtcatttctgag
attaattcgaccggatttgggttaaccatgggggtccatagccgtaatgaagtgacatac
acacgaatagagaaaaacatcaaagtgggtaattgctatatcaatcgtgatcaagttggt
gcagtcgttggtgttcaaccgtttggtgggcaagggttatcggggactggacctaaagcg
ggtgggcctcgttatttaattcgttatacaaaagcaaatacaacgacttcaaaatga

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