Aliivibrio fischeri MJ11: VFMJ11_1827
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Entry
VFMJ11_1827 CDS
T00754
Name
(GenBank) protein YfcK
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
vfm
Aliivibrio fischeri MJ11
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfm03016
]
VFMJ11_1827
Enzymes [BR:
vfm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
VFMJ11_1827
Transfer RNA biogenesis [BR:
vfm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
VFMJ11_1827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_30
DAO
Pyr_redox_3
NAD_binding_9
Mqo
Pyr_redox_2
FAD_binding_3
NAD_binding_8
FAD_binding_2
F420_oxidored
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ACH66472
UniProt:
B5FFP2
LinkDB
All DBs
Position
I:1940954..1942996
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AA seq
680 aa
AA seq
DB search
MSQNHILPQNSITNAVLEWNESGTPVSNDFDDVYFSNDNGLEETRYVFLQQNHLPQRWQE
YDQRRFVIGETGFGTGLNFLAVWQWFKEFRSQYPDAPLKELHFVSFEKFPVTKSDLIKAH
QAWPELAQFAEQLQEHYPAAVPDCHRLVLEDGMITLDLWFGDIKDCMPQIWMDDKGLIDA
WFLDGFAPSKNPEMWNQTLFNNMASLAKENCTCATFTAAGFVRRGLIEAGFDMKKVKGFG
HKREMIAGTLTERTTKANHEVWYARSTKENITDVAIIGGGVASAALATTLIRRGVKVSVY
CKDEKSAQGASGNKQGAVYPLLNEKFNSLSRFFAPGFIFARQFIDQAAKHVEFDHDWCGV
TQLKWDEKSANKLNKMLEGNFPNELVSSFDIDKTNQMVGLPINMESVHYPLGGWLCPKQL
TRGLFEHLSNNPLFTLHCDSEITALTQNEQQQWLLSTDSNTYQHQAVVVANGHRFTDFEQ
TKDIPATPVRGQVSHIPTTESLKNLNTVLCYDGYLTPENSKHQTHCIGASYDRRDLGLAF
KESDQIENGERLRKCIPNETWPNDVDTSDNQARIGIRCASRDHLPFIGNVVRFEDMQEEY
KNIYKKRHWLREAKDIPVYDGLFCMLTLGSRGLSSAPLLAETLASQIMGDPIPLPNSVLE
GLHPGRLWVRRLLKGKPLDI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaaccacattttaccacaaaacagcatcactaatgcagtccttgaatggaat
gagtctggaacacccgtctcgaatgattttgatgacgtgtatttttctaacgataatggg
ttagaagaaacacgttatgtgttcttacaacaaaatcatcttccacaaagatggcaagaa
tatgaccaacgtcgttttgtgattggtgaaacaggatttgggactggattaaactttctt
gctgtatggcaatggttcaaagagttccgttcacaataccctgatgctcctttaaaagag
cttcactttgttagctttgaaaaatttccagttactaaatctgatttaattaaagctcat
caagcgtggccagaattggctcaatttgctgaacaattacaagaacactatccagctgcc
gtacctgattgccatcgtttagtactagaagacggcatgataacacttgatctctggttt
ggtgacataaaagattgtatgcctcagatctggatggacgataaaggactcatagatgca
tggttcctcgatggttttgcgccaagtaaaaaccctgaaatgtggaatcagactcttttt
aataatatggcaagcctagccaaagaaaactgtacctgtgctacgtttactgcggctgga
tttgttcgtagaggtctaattgaagctggctttgatatgaagaaagtcaaaggctttggg
cataagcgtgaaatgattgcgggcacattaacggaacgtacaaccaaagcaaaccatgaa
gtatggtatgcccgctcaaccaaagaaaacatcactgacgttgctattataggaggcggt
gttgctagtgctgcattagccacaaccttaattagacgtggtgtaaaagtgagtgtttat
tgcaaagatgagaaatcagcacaaggggcatcaggtaacaagcaaggtgctgtataccca
ctgcttaatgagaaattcaattctctttctcgtttctttgctccaggatttatttttgct
cgtcagtttatcgaccaagccgctaaacacgtagaatttgatcatgattggtgtggtgtt
actcagttaaaatgggatgaaaaatccgccaataagctaaataaaatgcttgaagggaat
ttccctaatgaacttgtctcttcttttgatatcgacaaaaccaatcaaatggttggttta
ccgattaatatggaaagcgtccactacccattaggtggttggttatgtccaaaacaatta
actcgcggattatttgaacatttatcaaataatccactgttcactctacattgtgattcg
gaaataaccgcattaacacagaacgaacaacaacaatggcttctatcaacagatagcaat
acttaccaacatcaggccgttgtcgttgcaaacgggcacagatttactgattttgagcaa
actaaagacattccagcgacacctgttcgtggacaagtcagtcatattccaacgacagaa
tcactaaaaaatctgaacaccgtattatgttatgacggttacctaacgcctgaaaatagc
aaacatcaaactcactgtattggtgctagttatgatcgtcgcgatttgggtcttgcattt
aaagagtcagatcaaatcgaaaatggcgagagattacgaaaatgtattccaaacgaaacg
tggccaaacgacgttgatactagcgataaccaagctcgtataggcattcgatgtgctagt
cgtgatcatctaccatttatcggaaacgtagtacgttttgaagatatgcaagaagaatac
aaaaacatctataagaaacgccactggttacgtgaagcgaaagatatccctgtttatgat
ggtttgttctgcatgctaacactcggttcaagaggattgagctctgccccattattagca
gaaactttagcatcacaaattatgggtgacccaattccactacccaattcagtacttgag
ggattgcatccaggaagattatgggtaagaaggttgttgaaaggaaaaccgttggatatt
taa
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