Vibrio furnissii: vfu_A00423
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Entry
vfu_A00423 CDS
T01680
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vfu
Vibrio furnissii
Pathway
vfu03030
DNA replication
vfu03410
Base excision repair
vfu03420
Nucleotide excision repair
vfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
vfu_A00423
03410 Base excision repair
vfu_A00423
03420 Nucleotide excision repair
vfu_A00423
03440 Homologous recombination
vfu_A00423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfu03032
]
vfu_A00423
03400 DNA repair and recombination proteins [BR:
vfu03400
]
vfu_A00423
Enzymes [BR:
vfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
vfu_A00423
DNA replication proteins [BR:
vfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
vfu_A00423
DNA repair and recombination proteins [BR:
vfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
vfu_A00423
NER (nucleotide excision repair)
GGR (global genome repair) factors
vfu_A00423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADT85644
LinkDB
All DBs
Position
1:447202..450000
Genome browser
AA seq
932 aa
AA seq
DB search
MARIPDNPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVINMVRAMMRQFASDRMAV
VFDAKGKTFRDELYPEYKAQRPPMPDDLRCQIEPLHNVIRAMGLPLLSIEGVEADDVIGT
LAHQASQAGIPVLISTGDKDMAQLVDDNVTLINTMTNVVMDRDGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGGLTALYDNLDKIADLGFRGSKTMAKKLEDNR
ANAELSYELATIKLDVALDCTPETLLKATPDRDALIELYGQLSFKSWLNELLEGGTGVVE
AAEKSAASVAVSGASQAAPMADSVAVKIDRSQYETIVDEAAFNRWLDKLRSAEVFAFDTE
TDSLDYMVANLVGVSFAVAEGEAAYVPVAHDYLDAPQQLDRDWALAQLKPILEDAQQAKV
GQNLKYDASILARYDINMQGIAHDTMLASYVYNSVGGKHDMDSLALRFMQHSCISFEQVA
GKGKNQLTFNQIDLEQAAPYAAEDADVTLRLHHRLLPLLEQDDKLLSVYRDIEMPLVPVL
SRIERTGVLINDMLLGAQSQEIAQRLDELEKKAFDIAGQEFNLSSPKQLQTIFFDQMKLP
VIKKTPSGTPSTNEEVLQELALDYPLPAVILEYRGLAKLKSTYTDKLPKMINPTTGRVHT
SYHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRIMAHL
SGDKALLEAFQQGKDIHAATAAEILGISIDQVTSEQRRRAKAVNFGLIYGMSAFGLAKQL
GIPRGEAQAYMDTYFERYPGVMQYMEDTRSTAAEQGYVETLFGRRLHLPEITSRNGMRRK
AAERAAINAPMQGTAADIIKKAMLLVDAWIEAEGAGRVKLLMQVHDELVFEVEESALSEI
ESKVQKLMESAAALKVPLVAEAGHGDNWDEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcatccctgataacccgttaattctgatcgacggctcttcttatttataccgt
gcatttcatgcctacccgggcaccatgagcaacggtgagatcccgactaacgctgtgtat
ggcgtgatcaacatggttcgcgccatgatgcgtcaatttgccagtgatcgaatggcggtc
gtctttgatgccaaaggcaaaacctttcgcgatgaactgtatccggaatacaaggcgcag
cgtccgccgatgccggatgatctgcgttgtcagatcgaaccgctccataacgtgattcgt
gccatggggctgccattgctgtcgattgaaggggtcgaagcggacgacgtgatcgggaca
ctggcgcatcaagcgtctcaggcgggtattccggtgctgatcagtaccggcgacaaggac
atggcgcagttggttgacgacaacgtgaccctgatcaacaccatgaccaacgtggtgatg
gatcgcgacggcgtgattgaaaaattcggcattccgccggagctgatcatcgattacctc
gcgctgatgggcgataaagtcgataacattccgggtgtgccgggcgtgggcgacaaaacc
gccacagctttgttgcaggggatcggtggcctgacggcgctgtatgacaatctggataaa
attgccgacctgggattccgtgggtctaaaaccatggccaagaagctggaagacaaccgc
gccaacgccgagctgtcgtacgaattggcgaccatcaaactcgatgttgcgctggattgc
acgccggaaacgctgctcaaagccacgccggatcgtgatgcgctgattgaactttatggc
caattgtcgtttaaatcttggttgaacgagctgcttgaaggcggcactggtgtggtcgaa
gcggcagagaaaagtgctgctagcgttgccgtcagtggcgcgtcgcaagcggcaccgatg
gctgactcggtggcggtgaaaatcgatcgcagccaatatgaaaccattgtggatgaagcg
gcattcaaccgttggctcgacaaactgcgcagcgccgaggtgtttgcgtttgataccgaa
accgacagcctggattacatggtggcgaatctggtgggcgtttctttcgctgttgcggaa
ggagaggctgcctacgtgccagtggcacacgattatctggacgcgccacagcaactcgat
cgcgattgggcgctggcgcaactgaaaccgattttagaagatgcgcagcaagccaaagtg
ggtcaaaacctcaagtacgatgccagcattctggcgcgctacgacatcaacatgcagggc
atcgcgcacgacaccatgctcgcatcgtatgtgtacaacagcgtgggcggcaagcatgac
atggacagcctggcgctgcgtttcatgcaacacagctgcatttcgtttgaacaggtggcg
ggcaaaggcaagaaccaactcacctttaaccagattgaccttgaacaagcggcgccttac
gccgcagaagatgccgacgtcacgctacgtttgcatcatcgtttgctgccgctgctggaa
caagacgacaaactgctgagtgtgtatcgcgacatcgagatgccgctggtgcccgttctg
tcacgcattgaacgcaccggcgtgctgatcaacgacatgctgctgggcgcgcaatcgcaa
gagattgcgcagcgtctggatgagctggaaaagaaagcgttcgatatcgcgggccaagaa
tttaacctcagctcgccaaaacagctgcaaaccatcttctttgatcagatgaaactgccg
gtgatcaagaaaacaccatcgggtacgccatcaaccaacgaagaagtgctgcaagagctg
gcgctggattatccattgcctgcagtcattctcgaataccgcggtctggcgaagctcaaa
tcgacctacaccgataaactgccgaagatgatcaacccgactacgggccgcgtacacacg
tcatatcatcaggcggtgacggccaccgggcgtctctcttcgaccgatccaaacttgcag
aacattccgattcgcaatgaagaaggccgtcgcattcgtcaggcattcgttgcgccacat
ggctggaaaatcatggcggtcgactactcgcaaatcgaactgcgcatcatggcgcatttg
tctggcgataaagcgctgctggaagctttccaacaaggtaaagatatccacgccgccacc
gcggctgaaattctgggtatcagcatcgatcaggtgaccagcgagcagcgccgccgcgcg
aaagcggtcaactttggtttgatttacggcatgagtgcgtttggcttggcgaaacaactc
ggcattccgcgcggtgaagcgcaagcgtacatggacacttactttgagcgttaccctggc
gtgatgcaatacatggaagacacacgcagtaccgctgcagagcagggctacgtggaaacc
ttgtttggtcgtcgtctccatctgccggaaatcacctcgcgtaacggcatgcgtcggaaa
gcagcggaacgtgcggcgattaacgcgccgatgcagggcactgcggccgacatcattaag
aaagcgatgttgctggtggatgcgtggatcgaagcggaaggtgcgggtcgcgtgaaactg
ctgatgcaggtacacgatgaactggtgtttgaagtcgaagagtcagctttgtccgaaatt
gaaagtaaagtacagaaattgatggaatctgcagcagcgctgaaggtgccgctggtggcc
gaagccggccatggtgacaactgggatgaggctcattaa
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