KEGG   Vibrio furnissii: vfu_A00423
Entry
vfu_A00423        CDS       T01680                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
vfu  Vibrio furnissii
Pathway
vfu03030  DNA replication
vfu03410  Base excision repair
vfu03420  Nucleotide excision repair
vfu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vfu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    vfu_A00423
   03410 Base excision repair
    vfu_A00423
   03420 Nucleotide excision repair
    vfu_A00423
   03440 Homologous recombination
    vfu_A00423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vfu03032]
    vfu_A00423
   03400 DNA repair and recombination proteins [BR:vfu03400]
    vfu_A00423
Enzymes [BR:vfu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     vfu_A00423
DNA replication proteins [BR:vfu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     vfu_A00423
DNA repair and recombination proteins [BR:vfu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     vfu_A00423
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     vfu_A00423
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: ADT85644
LinkDB
Position
1:447202..450000
AA seq 932 aa
MARIPDNPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVINMVRAMMRQFASDRMAV
VFDAKGKTFRDELYPEYKAQRPPMPDDLRCQIEPLHNVIRAMGLPLLSIEGVEADDVIGT
LAHQASQAGIPVLISTGDKDMAQLVDDNVTLINTMTNVVMDRDGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGGLTALYDNLDKIADLGFRGSKTMAKKLEDNR
ANAELSYELATIKLDVALDCTPETLLKATPDRDALIELYGQLSFKSWLNELLEGGTGVVE
AAEKSAASVAVSGASQAAPMADSVAVKIDRSQYETIVDEAAFNRWLDKLRSAEVFAFDTE
TDSLDYMVANLVGVSFAVAEGEAAYVPVAHDYLDAPQQLDRDWALAQLKPILEDAQQAKV
GQNLKYDASILARYDINMQGIAHDTMLASYVYNSVGGKHDMDSLALRFMQHSCISFEQVA
GKGKNQLTFNQIDLEQAAPYAAEDADVTLRLHHRLLPLLEQDDKLLSVYRDIEMPLVPVL
SRIERTGVLINDMLLGAQSQEIAQRLDELEKKAFDIAGQEFNLSSPKQLQTIFFDQMKLP
VIKKTPSGTPSTNEEVLQELALDYPLPAVILEYRGLAKLKSTYTDKLPKMINPTTGRVHT
SYHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRIMAHL
SGDKALLEAFQQGKDIHAATAAEILGISIDQVTSEQRRRAKAVNFGLIYGMSAFGLAKQL
GIPRGEAQAYMDTYFERYPGVMQYMEDTRSTAAEQGYVETLFGRRLHLPEITSRNGMRRK
AAERAAINAPMQGTAADIIKKAMLLVDAWIEAEGAGRVKLLMQVHDELVFEVEESALSEI
ESKVQKLMESAAALKVPLVAEAGHGDNWDEAH
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggctcgcatccctgataacccgttaattctgatcgacggctcttcttatttataccgt
gcatttcatgcctacccgggcaccatgagcaacggtgagatcccgactaacgctgtgtat
ggcgtgatcaacatggttcgcgccatgatgcgtcaatttgccagtgatcgaatggcggtc
gtctttgatgccaaaggcaaaacctttcgcgatgaactgtatccggaatacaaggcgcag
cgtccgccgatgccggatgatctgcgttgtcagatcgaaccgctccataacgtgattcgt
gccatggggctgccattgctgtcgattgaaggggtcgaagcggacgacgtgatcgggaca
ctggcgcatcaagcgtctcaggcgggtattccggtgctgatcagtaccggcgacaaggac
atggcgcagttggttgacgacaacgtgaccctgatcaacaccatgaccaacgtggtgatg
gatcgcgacggcgtgattgaaaaattcggcattccgccggagctgatcatcgattacctc
gcgctgatgggcgataaagtcgataacattccgggtgtgccgggcgtgggcgacaaaacc
gccacagctttgttgcaggggatcggtggcctgacggcgctgtatgacaatctggataaa
attgccgacctgggattccgtgggtctaaaaccatggccaagaagctggaagacaaccgc
gccaacgccgagctgtcgtacgaattggcgaccatcaaactcgatgttgcgctggattgc
acgccggaaacgctgctcaaagccacgccggatcgtgatgcgctgattgaactttatggc
caattgtcgtttaaatcttggttgaacgagctgcttgaaggcggcactggtgtggtcgaa
gcggcagagaaaagtgctgctagcgttgccgtcagtggcgcgtcgcaagcggcaccgatg
gctgactcggtggcggtgaaaatcgatcgcagccaatatgaaaccattgtggatgaagcg
gcattcaaccgttggctcgacaaactgcgcagcgccgaggtgtttgcgtttgataccgaa
accgacagcctggattacatggtggcgaatctggtgggcgtttctttcgctgttgcggaa
ggagaggctgcctacgtgccagtggcacacgattatctggacgcgccacagcaactcgat
cgcgattgggcgctggcgcaactgaaaccgattttagaagatgcgcagcaagccaaagtg
ggtcaaaacctcaagtacgatgccagcattctggcgcgctacgacatcaacatgcagggc
atcgcgcacgacaccatgctcgcatcgtatgtgtacaacagcgtgggcggcaagcatgac
atggacagcctggcgctgcgtttcatgcaacacagctgcatttcgtttgaacaggtggcg
ggcaaaggcaagaaccaactcacctttaaccagattgaccttgaacaagcggcgccttac
gccgcagaagatgccgacgtcacgctacgtttgcatcatcgtttgctgccgctgctggaa
caagacgacaaactgctgagtgtgtatcgcgacatcgagatgccgctggtgcccgttctg
tcacgcattgaacgcaccggcgtgctgatcaacgacatgctgctgggcgcgcaatcgcaa
gagattgcgcagcgtctggatgagctggaaaagaaagcgttcgatatcgcgggccaagaa
tttaacctcagctcgccaaaacagctgcaaaccatcttctttgatcagatgaaactgccg
gtgatcaagaaaacaccatcgggtacgccatcaaccaacgaagaagtgctgcaagagctg
gcgctggattatccattgcctgcagtcattctcgaataccgcggtctggcgaagctcaaa
tcgacctacaccgataaactgccgaagatgatcaacccgactacgggccgcgtacacacg
tcatatcatcaggcggtgacggccaccgggcgtctctcttcgaccgatccaaacttgcag
aacattccgattcgcaatgaagaaggccgtcgcattcgtcaggcattcgttgcgccacat
ggctggaaaatcatggcggtcgactactcgcaaatcgaactgcgcatcatggcgcatttg
tctggcgataaagcgctgctggaagctttccaacaaggtaaagatatccacgccgccacc
gcggctgaaattctgggtatcagcatcgatcaggtgaccagcgagcagcgccgccgcgcg
aaagcggtcaactttggtttgatttacggcatgagtgcgtttggcttggcgaaacaactc
ggcattccgcgcggtgaagcgcaagcgtacatggacacttactttgagcgttaccctggc
gtgatgcaatacatggaagacacacgcagtaccgctgcagagcagggctacgtggaaacc
ttgtttggtcgtcgtctccatctgccggaaatcacctcgcgtaacggcatgcgtcggaaa
gcagcggaacgtgcggcgattaacgcgccgatgcagggcactgcggccgacatcattaag
aaagcgatgttgctggtggatgcgtggatcgaagcggaaggtgcgggtcgcgtgaaactg
ctgatgcaggtacacgatgaactggtgtttgaagtcgaagagtcagctttgtccgaaatt
gaaagtaaagtacagaaattgatggaatctgcagcagcgctgaaggtgccgctggtggcc
gaagccggccatggtgacaactgggatgaggctcattaa

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