Vibrio furnissii: vfu_A00443
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Entry
vfu_A00443 CDS
T01680
Name
(GenBank) GGDEF family protein
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vfu
Vibrio furnissii
Pathway
vfu05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
vfu_A00443
Enzymes [BR:
vfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
vfu_A00443
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Gene cluster
GFIT
Motif
Pfam:
FIST
FIST_C
Motif
Other DBs
NCBI-ProteinID:
ADT85664
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All DBs
Position
1:468388..469755
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AA seq
455 aa
AA seq
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MDYMFTSSLFIPAHQSLHHALSAFEFSAQGQTLIQVFSSLPAQDITPFAEQIVQQYPDAQ
LVGLSTGQIIHNGDIHHQGTLLLMTQFAEATVSAAVSRFSNNPVRDTQTLVTALALQPNT
QAILCFAEYLSMERSERIGAFNHLAPNVPVAGGAASDGDDGRWVLLGTQTYRDAMVAVAL
HGDTLHASNAAYTEWNPIGRHFRVTKTDGKTLYRLDDMPVQEVYNRYLGDGQHVPFEMLH
NFPLIKGDLQQQDVYVPMYEDEPGIVLNQALSVGDEVRFCFDHPSLTLEQVYFGAEQLRA
FQPEQIFVYNCTSRLEFIEENQELLPLQSVAPTQGCYCMGELWHDGTLQRSLHHSMTYLA
LREGDTVERRAEPFSLGRHDVIAPLFSLIRNSLSDLDEMNHNLAYKIQSQASMLTASYRV
DPRTGLPNRVVRRISEAMGVDYLQGFHLGAPQRLG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
ttggattacatgtttacatcctctctttttatcccagcacatcaatcgctacaccacgcc
ctgtcggctttcgagttttctgcgcagggccagacactcattcaggttttctccagcctg
cctgctcaagacattaccccgtttgccgaacagatcgttcagcagtatcccgacgcgcag
ttggtggggctgagcaccgggcagatcattcacaacggagacattcatcatcaaggcact
ttgctgctgatgacgcagtttgcggaggccacggtgagcgcggcggtcagccgttttagc
aacaacccggtgcgagacactcaaacactggtcaccgcgctggcgctgcagcccaatacc
caagcgatactctgttttgccgagtacctgagtatggagcgctctgaacgcattggtgcg
ttcaaccatttggcgccgaatgtgccggtggcagggggcgccgcctcagatggtgacgac
ggccgttgggtgctgttggggacgcaaacctatcgcgatgcgatggtggcggtggcattg
cacggtgacacgttgcacgccagcaatgcggcgtatacagagtggaatccgattgggcgt
catttccgcgtcaccaagaccgacggcaagacgctgtatcgcctcgatgacatgcccgtg
caagaggtgtacaaccgctacctcggcgatgggcagcatgtgccgtttgagatgctgcac
aactttccgctcatcaagggcgatttgcagcagcaagatgtctacgtaccgatgtatgaa
gatgaaccggggattgtgctgaatcaagcgctgtcggtgggcgacgaagtgcgtttctgc
tttgaccatccgtccctgaccttagaacaggtctattttggcgccgagcagctgcgtgca
tttcagccagagcagatttttgtctacaactgcacgtcccgcttggaatttattgaagag
aaccaagagctgttaccgctgcaatcggtcgcgccaacccaaggctgttattgcatgggg
gagctgtggcacgatggcacgctgcaacgttcgctgcatcacagcatgacctacttggca
ctgcgcgaaggggacacggttgagcgccgcgctgaacctttctcactgggtcgccatgat
gtgattgcgccgctgtttagtttgattcgcaactcgctgagcgacttggacgagatgaac
cacaatctggcttataagattcaaagccaagccagcatgctgaccgccagttatcgcgtc
gacccgcgtaccggattacccaaccgcgtggtgcgtcgcatcagtgaagcgatgggggtc
gattacctacaaggtttccatttgggcgcgccgcaacggctcggttga
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