KEGG   Viruses: 11945643
Entry
11945643          CDS       T40000                                 
Symbol
S, MRCoV-HKU18_gp2
Name
(RefSeq) Magpie-robin coronavirus HKU18; spike glycoprotein
  KO
K19254  Coronaviridae (excluding betacoronavirus) spike glycoprotein
Virus
1159903  Magpie-robin coronavirus HKU18
SSDB
Motif
Pfam: CoV_S2 CoV_S1 CoV_S1_C CoV_S2_C DUF1664 BLOC1_2 EXOC6_Sec15_N Baculo_F Syntaxin-6_N HMMR_N V_ATPase_I TMF_DNA_bd Phage_GPO XhlA Pox_EPC_I2-L1 DUF2959 GP41
Other DBs
NCBI-GeneID: 11945643
NCBI-ProteinID: YP_005352854
RS: NC_016993
UniProt: H9BR08
LinkDB
Position
NC_016993:19338..22991
AA seq 1217 aa
MRGAILTLILVTSVKASPLADSVLDFLTFPGAHSYLHPRRGDLGALGNRMRANIRNSQTD
VCTTIQQGGFIPSTFTFPQWYVLTNGSTFLQGEYTLSQPLLANAHFCPRKNSDGYWRYSF
NNSCLFPDHRCQDHWYDSQNPICLGWNNTFGLSDNIRININISHDEYQSHGGYVSLTLES
GSVVNITCTNNSDPSTVTLATSLLPWARAIDQPMYCFANLTTGTASQLDFMGMLPPLVSE
LAFDRTGGIYINGYRYYLTSALRDVDFKLKRNDTAEYFAVTWANYTDVHLSVDAGAIEKI
KYCNTPLDRLACDMNVFNLSDGVYSYTSLEKASVPETFVTLPVYSNHTYVTINTSYTVGS
CVNCPPISSTIDIMHARNDTLCVNSRQFTVRLNTHHHAQYPQYFSTAFVAGTCPFTLPNI
NNYLTFGSVCFSTVNNGGCTIHVQKVWNHQYHTFGTIYVAYQDGNYITALPQPSTGVADI
STVHLDVCTKYSIYGKTGTGVIRETNQSYTAGLYYTSSSGDLLAFKNVTTQKVYSVTPCT
LASQVAVYNNSILAAFTSTANLTAIDFNYTIATPTFYYHSIGNETCEQPVITYGSIGLCP
GGGLRLAHPTEDAAPILVPISTSNISIPKNFTVSIQTEYIQIEQQPVVVDCRQYVCNGNP
RCLQLLQQYTSACSTIEQALSLNARLEASSIQDLLTYSPETLVLANISNFDSGDLNYNLS
SLLPKELYGKSAIEDLLFNKVVTNGLGTVDQDYKACTNGMSIADLVCAQYYNGIMVLPGV
AGPEKMAQYTASLTGAMVFGGITAASAIPFSLAVQSRLNYVALQTDVLQQNQQLLADSFN
NAIGNITLAFKEVSEGLSQVSGAVATVANALTKVQTVVNEQGHALATLTQQLANNFQAIS
ASISDIYNRLNQLEADAQVDRLITGRLASLNAFVTQTLSKLAEVRQQRQLATDKVNECVK
SQSPRYGFCGNGTHLFSIVNAAPQGLLFFHTVLLPTQYAYVQAFSGICYNGIALALNDPT
LALFKNGDKYLVSPRNMYQPRVPAQADFVYIETCTITYLNLTDLTIDVVIPDYVDVNQTV
NDILSKLPNSTGPSLTIDQYNNTILNLTTEIADLNNRTQNLSDVVQNLEEYIHKLNATLV
DLDWLNRVETYIKWPWWVWLLITLAIVAFVVILVTIFLCTGCCGGCFGCCGGCFGLFSHN
KRNTESIPITSFKLKEW
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgcggggagctatattaactttaatcctcgtcacatcagtcaaagcgtctccgcttgcg
gattccgttcttgacttcttaaccttccctggcgcccacagttatctacacccaaggagg
ggagatctaggagcgctaggcaaccgcatgcgtgccaacatacgtaactctcagactgat
gtttgcaccacaattcagcagggcggtttcataccctccactttcacttttcctcagtgg
tatgtcctaaccaatgggtcgactttcctacagggtgagtacaccctctctcagccattg
ctcgccaatgctcacttctgtcccaggaagaactctgatgggtattggcgctattcattc
aacaattcatgcctctttcctgaccaccgctgtcaggaccactggtatgactcccaaaac
cctatctgtctaggctggaataacacttttggcctttccgacaatatccgcatcaacatt
aacatatcccacgatgagtaccaatcacatggaggttatgttagcttaacacttgagtcg
ggttctgttgttaatatcacttgcactaacaactccgacccatcaacggttactctagcc
acatcgctactgccctgggctagggccatagatcagccgatgtattgctttgccaacctc
accacaggcactgcatctcagctggattttatgggtatgttaccacctctcgtgtcagaa
cttgcttttgaccggacgggtggtatctacattaatggctaccgctattatttaactagc
gccctccgtgatgtggatttcaagttaaagcgcaacgacaccgcggagtacttcgccgtt
acttgggctaattatactgacgtccatcttagcgtagatgctggcgccattgagaaaatt
aagtattgcaacaccccactagacaggttggcgtgtgacatgaatgtctttaatctaagt
gatggggtctactcctacacctcacttgaaaaagccagcgttccagagacctttgtaacg
ctgcccgtctattcaaaccatacgtatgtgacaattaacacctcctacaccgttggtagc
tgtgttaattgtccacccatatcctccaccattgacatcatgcacgcacgtaatgatacc
ttatgtgttaattctagacaattcaccgtccgtcttaacacccatcaccatgcgcagtac
cctcagtactttagtactgcatttgtagcgggcacttgtccttttacgctacccaatatt
aataattatttaacatttggtagcgtttgtttttccaccgttaacaatggtggttgcacc
atccatgtccagaaggtttggaaccaccaataccacacctttggcaccatctatgttgcc
taccaagatggcaactacatcacagctctgccgcagccctccactggtgttgctgacatc
tccactgtccatcttgatgtctgtaccaaatactccatttatggtaagacgggtacgggc
gtcatacgcgagacgaatcagtcctacactgccgggctctattacacttcttcttctgga
gatttgttagcgttcaaaaacgtaaccacccagaaggtctactctgtaaccccctgcacc
cttgctagtcaggttgcggtttacaacaactctatcctggcagcattcacctccacggcg
aacctcactgccatagatttcaattacacaatcgctactcccaccttttactaccattcc
attggtaatgagacgtgcgagcagcctgttatcacttatggttccataggtctctgtccc
gggggtggccttcgccttgcccaccccacggaggatgcagcccctattttggttccgatt
tccacaagtaacatttccatacccaagaactttactgtatctattcaaactgaatacata
cagatcgagcaacagcctgttgtagttgactgccggcagtatgtttgcaatggcaaccct
cgctgcttacagttacttcagcaatacacctctgcatgctccaccatagagcaggctctt
tcactaaatgctcgtctagaggcatctagcattcaagacttgctcacatattcacctgag
acactggttctagccaacatttcaaactttgactcgggtgatcttaattacaacctttcc
tccctcctacccaaggagctgtatggcaagtctgccattgaggatctactttttaataaa
gtagtcactaatggcctaggcactgttgatcaggattataaggcatgcactaatggcatg
tctatagctgaccttgtctgcgcccaatactataacggcattatggttcttccaggcgtt
gccggtccagaaaagatggctcaatacacggcatcgcttactggtgctatggtattcggc
ggtatcacagccgcatcagctatacccttctcactagctgttcaatctcgacttaattat
gttgcactacagactgatgtgctgcaacaaaaccagcaattgttagccgactcatttaat
aatgcaatcggcaatattacattagccttcaaagaagttagtgagggcctctcacaagtc
tcgggcgcggtagcaaccgtcgccaatgcgctcaccaaggttcagactgttgttaatgaa
caaggccatgcccttgcaacactaacgcagcaactggccaataactttcaggctatctcc
gcctctatatccgacatctataacagactcaaccaacttgaggcagatgctcaggttgat
agacttattacgggacgtctagcatcactaaatgcattcgtcacacagacactatcaaaa
ctagctgaagtccgccagcagcggcagctagccactgataaagttaatgagtgcgttaaa
tcacagtccccccgctatggattctgtggtaacggcacccatctcttctcaattgtcaat
gcagcgccacaagggttgttattcttccacactgtgttgttaccaacccaatatgcttat
gtgcaggccttctcgggcatttgctacaatgggatagcgcttgcccttaacgaccccaca
ctagcactatttaagaatggagacaagtacctcgtgtccccgcgtaatatgtatcagcct
cgagttcccgctcaagccgacttcgtatacattgagacttgtaccatcacctatctcaat
ctcactgatcttactattgatgttgttatccctgattacgtagatgttaatcagactgtt
aatgacattcttagtaaactacccaatagtactggaccaagtttaacaattgaccagtat
aacaatactatcctcaacctcaccactgagattgcggacctcaacaatcgcactcaaaat
ctatctgacgttgttcagaatcttgaagagtacattcataaattaaatgccacactagtt
gacctcgattggctcaacagagtggaaacttatattaagtggccgtggtgggtctggtta
ctaatcaccctcgccatcgtcgcatttgttgtaattttagtcaccatcttcctctgcact
ggctgctgcggaggttgctttggttgctgtggtggctgttttgggctcttctctcacaac
aagagaaacaccgagtccataccgatcacctcttttaaacttaaggaatggtag

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