Viruses: 1489706
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Entry
1489706 CDS
T40000
Symbol
RRVgp1
Name
(RefSeq) Ross River virus; nonstructural polyprotein
KO
K25300
Alphavirus polyprotein P1234
Virus
11029
Ross River virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
RdRP_2
Peptidase_C9
nsP3_ZBD
ToMV_Hel_N
Vmethyltransf
Viral_helicase1
Macro
RdRP_1
AAA_30
RdRP_4
AAA_19
MeaB
AAA_11
Motif
Other DBs
NCBI-GeneID:
1489706
NCBI-ProteinID:
NP_062879
RS:
NC_001544
UniProt:
P13887
LinkDB
All DBs
Position
NC_001544:81..7523
Genome browser
AA seq
2480 aa
AA seq
DB search
MKVTVDVEADSPFLKALQKAFPAFEVESQQVTPNDHANARAFSHLATKLIEQEVPANITI
LDVGSAPARRLMSDHSYHCICPMKSAEDPERLANYARKLAKTAGEVLDKNVSGKITDLQD
VMATPDLESPTFCLHTDETCRTRAEVAVYQDVXXHAPTSLYHQAMKGVRTVYWIGFDTTP
FMFEVVAGAYPTYSTNWADEQVLQARNIGLCATSLSEGHRGKISIMRKKRLRPSDRXMFS
VGXTLYIESRRLLKSWHLPSVFHLKGKNSFTCRCDTIVSCEGYVVKKITMSPGTYGKTVG
YAVTHHAEGFLMCKVTDTVRGERVSFPVCTYVPATICDQMTGILATDVTPEDAQKLLVGL
NQRIVVNGRTQRNTNTMKNYLLPVVAQAFSKWAREAKADMEDEKPLGTRERTLTCCCLWA
FKNHKTHTMYKRPDTQTIVKVPSTFDSFVIPSLWSSSLSIGIRQRIKLLLGPKLSRDLPY
SGDRNEAREAEKEAEETKEAELTREALPPLVGSNCADDVDQVDVEELTYRAGAGVVETPR
NALKVTPQERDQLIGAYLILSPQTVLKSEKLTPIHPLAEQVTIMTHSGRSGRYPVDRYDG
RVLVPTGAAIPVSEFQALSESATMVYNEREFINRKLHHIALYGPALNTDEENYEKVRAER
AEAEYVFDVDKRTCVKREDASGLVLVGDLINPPFHEFAYEGLKIRPATPFQTTVIGVFGV
PGSGKSAIIKSVVTTRDLVASGKKENCQEIVNDVKKQRGLDVTARTVDSILLNGCRRGVE
NLYVDEAFACHSGTLLALIAMVKPTGKVILCGDPKQCGFFNLMQLKVNFNHDICTQVLHK
SISRRCTLPITAIVSTLHYQGKMRTTNLCSAPIQIDTTGTTKPAKGDIVLTCFRXWVKQL
QIDYRGHEVMTAAASQGLTRKGVYAVRQKVNENPLYAPSSEHVNVLLTRTENRLVWKTLS
GDPWIKVLTNIPKGDFSATLEEWQEEHDNIMNALRERSTAVDPFQNKAKVCWAKCLVQVL
ETAGIRMTAEEWDTVLAFREDRAYSPEVALNEICTKYYGVDLDSGLFSAQSVSLYYENNH
WDNRPGGRMYGFNREVARKFEQRYPFLRGKMDSGLQVNVPERKVQPFNAECNILLLNRRL
PHALVTSYQQCRGERVEWLLKKLPGYHLLLVSEYNLALPHKRVFWIAPPHVSGADRIYDL
DLGLPLNAGRYDLVFVNIHTEYRTHHYQQCVDHSMKLQMLGGDSLHLLXPGGSLLIRAYG
YADRVSEMVVTALARKFSAFRVLRPACVTSNTEVFLLFTNFDNGRRAVTLHQANQRLSSM
FACNGLHTAGCAPSYRVRRTDISGHAEEAVVNAANAKGTVGVGVCRAVARKWPDSFKGAA
TPVGTAKLVQANGMNVIHAVGPNFSTVTEAEGDRELAAAYRAVAGIINASNIKSVAIPLL
STGVFSGGKDRVMQSLNHLFTAMDTTDADVVIYCRDKAWEKKIQEAIDRRTAVELVSEDI
SLESDLIRVHPDSCLVGRKGYSITDGKLHSYLEGTRFHQTAVDMAEISTLWPKLQDANEQ
ICLYALGESMDSIRTKCPVEDADSSTPPKTVPCLCRYAMTAERVARLRMNNTKAIIVCSS
FPLPKYRIEGVQKVKCDRVLIFDQTVPSLVSPRKYIPAAASMHADTVSLDSTVSTGSAWS
FPSEATYETMEVVAEVHHSEPPVPPPRRRRAQVTMHHQELLEVSDMHTPIAARVEIPVYD
TAVVAERVAIPCTSEYATPIPTPRAVRVVPVPAPRIQRASTYRVSPTPTPRVLRASVCSV
TTSAGVEFPWAPEDLEVLTEPVHCEMREPVELPWEPEDVDIQFGDFETPDKIQFGDIDFD
QFXLSRAGAYIFSSDTGPGHLQQKSVRQHALPCEMLYAHEEERTYPPALDEAREKLLQAK
MQMAPTEANKSRYQSRKVENMKAVIIDRLKDGARTYLAEQSEKIPTYASKYPRPVYSPSV
EDSLQSPEVAVAACNAFLEANYPTVASYQITDEYDAYLDMVDGSESCLDRATFCPAKLRC
YPKHHAYHQPQVRSAVPSPFQNTLQNVLAAATKRNCNVTQMRELPTLDSAVFNVECFKKF
ACNGEYWQEFKDDPIRITTENITTYVTRLKGPKAAALFAKTHNLVPLQEVPMDRFVVDMK
RDVKVTPGTKHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLKAVLAPNIHTLFDMSAE
DFDAIIAAHFQPGDAVLETDIASFDKSQDDSLALTALMLLEDLGVDQELLDLIEEAFGEI
TSVHLPTGTRFKFGAMMKSGMFLTLFINTLLNIVIACRVLREKLTNSICAAFIGDDNIVH
GVRSDPLMAERCASWVNMEVKIIDATMCEKPPYFCGGFILYDNVTGSACRVADPLKRLFK
LGKPLPAGDTQDEDRRRALKDETDRWARVGLKSELEIALSSRYEVNGTGNIVRAMATLAK
SLKNFKKLRGPIVHLYGGPK
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcactgtagatgttgaggctgacagcccatttttgaaggcccttcagaaagca
ttcccggcttttgaggttgaatcacagcaggtcacacctaatgaccatgctaatgccaga
gctttttcgcatctggccacaaagttaattgaacaagaggttccagccaacatcaccatc
ctggacgtgggcagtgcgcccgcaaggaggttgatgtctgaccacagctaccattgcatt
tgtcccatgaagagtgcggaagacccagagagattagcgaactacgcccggaaactggca
aaaacagcaggggaagtgctagacaaaaatgtgtccggtaagatcacggacctgcaggac
gtcatggcaacccccgatctggaatctccaacgttctgtctccacaccgatgagacgtgt
cgcactagggctgaagtagctgtgtaccaggacgtgtannggcacgcaccgacctcgctt
tatcatcaagcgatgaaaggggtcaggacagtatactggataggattcgacaccacccca
ttcatgttcgaggttgttgctggcgcatacccaacgtattccacgaattgggcggacgag
caggtcctgcaggcacgtaacatcggcctatgtgcgaccagtcttagcgaaggacatcga
ggaaaaatctctattatgaggaagaaacgcctaaggccgagcgacagggntatgttctcg
gttgggncaacgctatatatagaaagtagacgccttcttaagagttggcatcttccctcc
gtgttccacctgaaaggcaagaatagctttacttgcaggtgcgatacaatagtttcatgc
gagggctacgttgttaaaaagatcacaatgagcccggggacgtacgggaagacggttgga
tacgccgttacgcaccatgcagaaggtttcctaatgtgcaaggtgacggacactgtgcgc
ggggagagagtatcattcccggtatgcacttatgtgcctgcaaccatttgcgatcagatg
acaggaatcctggctaccgacgtcacacccgaagatgcgcagaaactactggtggggttg
aaccaacgtatagttgtgaatggcagaacccaaaggaataccaacacaatgaaaaactac
ctattgccggtagtggcccaagctttcagcaagtgggcacgagaagcaaaagcagacatg
gaggatgagaaacctctgggaaccagagaaagaaccctgacgtgttgttgcctgtgggca
ttcaagaaccacaagacacacaccatgtacaaaaggccggatacccaaactatagtcaag
gtgccatctacttttgactcgtttgtgattccaagcctgtggtcatccagcctatccata
ggcatacggcaaagaataaaactgctgttaggcccaaaactctcgcgagacctcccgtac
tctggagaccgaaacgaagcgcgagaagcagagaaggaagccgaagagaccaaggaagca
gaattgacacgggaagcactgccaccattggtgggaagcaactgtgctgatgacgtcgat
caggtagatgtggaagagctgacgtaccgcgccggagcaggggtagtggagacacccagg
aatgcgctcaaagtgacaccacaagagcgcgatcagctgatcggcgcgtacctgatcttg
tctccgcaaacagtactgaagagtgaaaaactcacaccgatacatccactcgcggagcaa
gtgacaatcatgacgcactcaggaagatcaggcagatacccggttgaccgctacgacgga
cgtgtgttggtcccgacgggcgcagcgatccccgtcagcgaatttcaggcactcagtgag
agtgctactatggtctacaacgaacgtgagttcatcaatcgcaagttgcaccatatagca
ctctacggccccgccctaaacactgatgaggagaactacgaaaaagtaagggcagagaga
gccgaagctgaatacgtgtttgacgtcgacaagaggacgtgcgtgaagagagaagatgca
tcaggcctcgtactagttggcgacttaatcaacccacccttccatgagttcgcgtatgaa
ggactgaagatacggcccgcaacgcctttccaaaccacggtcattggcgttttcggagta
cctggttccggtaagtcagccataatcaagagtgtggtgactacgagggacctggtcgcc
agtgggaagaaggagaactgccaggagatagttaatgatgtcaaaaagcagagaggactg
gatgtaacagccaggactgttgactctatcctgttgaacgggtgcagaagaggagtagag
aatctatacgtggacgaagcatttgcctgtcattcaggtacactgttggcccttattgcc
atggtgaaaccaactggcaaggtgatcctatgcggagacccaaaacagtgtggattcttt
aacctgatgcaactgaaggtgaacttcaaccacgatatctgcacacaagtgctccacaaa
agcatatccagaagatgcaccctcccgatcacggctatcgtctcgaccctacactatcag
ggtaagatgagaaccacgaacttatgtagtgcacccatccagatagacacaacaggtacc
actaaaccagccaaaggagacatcgtgttaacgtgcttccgnngttgggtaaagcaactg
cagatagactatcgtggacacgaagtcatgacagcagctgcatcacaaggactgactaga
aaaggggtatacgccgttaggcagaaagtgaatgaaaacccactttatgccccttcatca
gaacatgtcaacgtattgctgactagaactgaaaaccggctggtgtggaaaacactgtcg
ggagacccgtggataaaggtgttaaccaatatccccaagggcgatttcagcgctacgttg
gaggagtggcaagaggagcatgacaacatcatgaacgcccttcgcgagaggtcgacagca
gtagacccgttccagaacaaagccaaagtctgctgggcaaagtgcctcgtgcaggtccta
gaaacagctgggatacgcatgacggcggaggagtgggatacagtgttggctttccgcgaa
gacagggcgtactcacccgaagtggctctgaacgagatctgtaccaagtattacggcgtt
gacttagacagcggattgttctctgcccaatcggtctcattgtactatgaaaacaaccac
tgggacaatagaccgggcggccggatgtatggattcaaccgcgaagtcgcccgtaagttt
gagcaacgctaccctttcctgagaggtaagatggactcggggctacaagttaatgttcca
gagagaaaagtacagccattcaatgcggaatgtaatatattactattaaacaggcgactt
ccgcacgccctcgtcaccagctaccagcagtgccggggcgagagggtagaatggcttctg
aagaagcttcccggataccatttattgctggtaagcgagtacaatctggcgttgccccat
aaaagagtattttggattgcaccaccccatgtgtcaggtgcagatcgtatttatgatctt
gacctaggattacccctgaatgcaggccgttacgacttggtatttgtgaacatacacact
gagtacaggacgcaccactaccaacagtgcgtcgaccattccatgaagttacagatgttg
ggcggtgactccttacatctattgnnncctggcggctcactgcttatccgtgcttacggg
tacgccgacagagtcagcgaaatggtggtcactgcattagctaggaagttttccgccttt
agagtcctgagaccagcatgtgtaaccagtaacactgaagtctttctgttgtttaccaat
tttgataacggcagaagggctgtgactcttcaccaggccaatcagaggcttagctccatg
tttgcatgcaacgggctacacacagccggatgcgcaccctcataccgtgtgcgcaggacc
gacatttccgggcacgccgaagaggcggttgtcaatgccgccaatgcgaagggcacagtc
ggcgttggggtttgcagagcggtggcgagaaaatggccagactccttcaaaggcgccgcg
actcctgtgggtacggccaagttggtacaggccaacggtatgaatgtcatccacgcggta
ggcccgaatttctccacggtgaccgaggcagagggcgacagagagttggccgccgcatac
cgtgccgtggcgggtatcatcaatgctagtaacattaagagtgtagccatccctctgttg
tcgactggggtgttctccggaggtaaagatagagtcatgcagtcactaaatcatctgttt
accgcaatggacaccacggacgctgacgtagtcatctattgccgcgacaaagcctgggag
aagaaaatccaggaggctatcgatcgccgcaccgccgtggaattggtatctgaagacatc
tcacttgagtctgatttgatacgggtgcacccggatagttgcttggtaggcagaaaaggt
tacagcataacagatgggaagctgcattcgtacctggaaggtacccgctttcatcagact
gcggtggatatggctgagatatctaccttgtggccgaaacttcaggacgcaaacgaacaa
atatgcttgtatgcattgggtgagagtatggacagtatcagaacgaaatgtcctgtcgag
gacgccgattcgtccacgcctccgaaaacagttccgtgtctgtgtaggtatgctatgact
gctgagagagtggcgaggcttcggatgaacaacactaaggccataattgtgtgctcttca
ttccctttaccgaagtacagaattgaaggcgtccagaaggtcaagtgcgaccgagtgctg
atttttgaccagacggtgccatctctggttagtccaaggaaatacataccagccgccgcc
tctatgcacgcagataccgtgagcttggattctacagtatccacaggatccgcgtggtca
ttcccatctgaggccacgtatgagaccatggaagtagtggcagaggtgcaccactcggaa
ccaccagtcccgccaccgcgcaggcgtcgtgcgcaggtgacgatgcaccaccaggagctg
ttggaagtttctgacatgcacaccccgattgcggcaagggtcgagatccctgtgtacgat
accgctgttgtagcggagagagtggccattccttgcacgagtgagtatgcaacccccata
ccaacaccacgggcagtaagggtcgtacccgtgccggcaccacgcattcagcgagcgtcg
acgtacagggtctctcctacacccacgcctcgcgttctgagagcctcggtatgcagtgtg
accactagcgctggggtagagttcccttgggcgcctgaagatctggaggtactcaccgag
cctgtgcattgcgaaatgcgcgagccggttgagttaccgtgggagcctgaggacgttgat
atccagttcggagattttgaaacacccgacaaaatccaattcggcgacattgatttcgac
caattctgactaagcagagcgggggcgtacatcttctcgtctgataccggaccggggcac
ttacaacagaagtcagtacggcaacacgcactaccgtgcgaaatgctatacgcccacgag
gaagaacggacgtacccccccgcactggatgaggctagggagaaactgctgcaggcaaaa
atgcagatggcacctacggaagcaaacaagagtaggtaccaatcaaggaaggttgaaaac
atgaaggcagtgatcatagataggctgaaggatggagcaagaacctacctggcagaacag
tcagagaagattccaacctatgctagtaagtacccgcggccagtttactcgccgtcggta
gaggatagcttgcagagtcccgaggtcgctgtggcggcctgcaatgctttcctggaagcc
aattacccgacagtggctagttaccagatcacggacgagtatgatgcctacttggatatg
gttgatgggtcagagagttgcttagaccgggcgaccttctgcccggcaaaattacgctgc
tacccaaagcatcatgcttaccaccaaccgcaggttaggagtgcggtcccatcaccattt
caaaacaccctgcagaatgtgctagcagcagccacgaagagaaattgcaatgttacacag
atgagagaactacctactctagactcagcagtgtttaacgtggaatgcttcaaaaaattt
gcatgcaatggagaatactggcaggaattcaaagatgacccaataagaataactacagag
aacataacaacttatgtcactaggcttaagggccctaaagcagcagcgctgtttgcgaag
actcacaatttagtcccgctgcaagaggtgcccatggaccggtttgtggtagatatgaag
agagacgtgaaagttacccctggcactaaacatactgaggaacgcccaaaggtgcaagtc
atccaggccgccgaacctttagctacagcttatttatgtggcattcacagggagttagtc
cgccgcctgaaggccgtcctggccccgaacatacatacattgttcgatatgtcggcagaa
gattttgacgccatcatagccgcacatttccaaccaggtgacgcagttttggaaacggac
atagcctcctttgacaagagccaagatgactctttggcgttgacggcactgatgctgttg
gaggacctcggggttgaccaagaactactagacctgatagaggaagcgtttggggaaatt
accagcgtccacctgccaacaggtacgcggttcaagtttggcgccatgatgaagtccgga
atgtttctgacactatttataaataccctgttaaacattgtcatagcatgccgtgtactg
cgtgagaagctgacaaactccatctgcgccgcgttcatcggggatgacaacatagtgcac
ggggtaagatctgacccgttgatggctgagaggtgcgccagctgggttaatatggaggta
aagataattgacgctaccatgtgcgagaaaccaccatacttctgcggcgggtttatactg
tatgacaatgtcaccggctcggcgtgccgagtggccgaccctctgaaaaggttatttaaa
ttaggcaaacctttacccgccggagacacccaagatgaagatcgtaggcgtgcattgaag
gatgagacggataggtgggcacgagtagggttgaagtctgaactggaaatagcactaagt
tcccggtatgaggtgaacgggaccggcaacatagtgcgagcaatggccacattggccaag
agcttgaagaactttaaaaaactgcgtggacccattgtacacctctacggcggtcctaaa
tag
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integrated database retrieval system
