Viruses: 1490021
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Entry
1490021 CDS
T40000
Symbol
env, Opavgp4
Name
(RefSeq) Jaagsiekte sheep retrovirus; envelope protein
Virus
11746
Jaagsiekte sheep retrovirus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
GP41
SUR7
Motif
Other DBs
NCBI-GeneID:
1490021
NCBI-ProteinID:
NP_041188
RS:
NC_001494
UniProt:
P31621
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Position
NC_001494:5350..7197
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AA seq
615 aa
AA seq
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MPKRRAGFRKGWYARQRNSLTHQMQRMTLSEPTSELPTQRQIEALMPYAWNEAHVQPPVT
PTNILIMLLLLLQRVQNGAAAAFWAYIPDPPMIQSLGWDREIVPVYVNDTSLLGGKSDIH
ISPQQANISFYGLTTQYPMCFSYQSQHPHCIQVSADISYPRVTISGIDEKTGKKSYGNGT
GPLDIPFCDKHLSIGIGIDTPWTLCRARVASVYNINNANATFLWDWAPGGTPDFPEYRGQ
HPPIFSVNTAPIYQTELWKLLAAFGHGNSLYLQPNISGTKYGDVGVTGFLYPRACVPYPF
MLIQGHMEITLSLNIYHLNCSNCILTNCIRGVAKGEQVIIVKQPAFVMLPVEIAEAWYDE
TALELLQRINTALSRPKRGLSLIILGIVSLITLIATAVTACVSLAQSIQAAHTVDSLSYN
VTKVMGTQEDIDKKIEDRLSALYDVVRVLGEQVQSINFRMKIQCHANYKWICVTKKPYNT
SDFPWDKVKKHLQGIWFNTNLSLDLLQLHNEILDIENSPKATLNIADTVDNFLQNLFSNF
PSLHSLWKTLIGLGIFVIIIAIVIFVFPCVVRGLVRDFLKMRVEMLHMKYRTMLQHRHLM
ELLKNKERGAAGDDP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgccgcgctggattccggaaaggctggtacgcgcggcagaggaactccctg
acgcatcagatgcaacgcatgaccctgagtgagcccacgagtgagctgcccacccagagg
caaattgaagcgctaatgccgtacgcctggaatgaggcacatgtacaaccccccgtgaca
cctactaatatactgattatgttgttgttactattacagcgggtacaaaatggggcagct
gcggctttttgggcatatattcctgatccgccaatgattcaatccttaggatgggataga
gaaattgtacctgtatatgttaatgatacgagccttttggggggtaaatcagatattcac
atttcccctcagcaagcaaatatttctttttatggccttactactcaataccccatgtgc
ttttcttatcaatcgcagcatccccattgtatacaggtgtcagccgacatatcatatcct
cgagtgactatttcaggcattgatgaaaaaacagggaaaaaatcgtatgggaacggaact
ggacccctcgatattccgttttgtgacaagcatttaagcatcggcataggcatagacact
ccgtggactttatgtcgagcccgggttgcatcggtgtataatatcaataatgccaatgcc
acctttttatgggactgggcacctggaggaacacctgattttcctgagtatcgaggacag
catccacctattttttcggtgaacaccgctcctatatatcagacggaactatggaaactt
ttggctgcctttggtcatggcaatagcctgtatttacagcccaatattagcggaaccaaa
tatggtgatgtgggagttacaggatttttatatccccgagcttgtgttccttacccattc
atgttgatacaaggccatatggaaataacgctgtcattaaatatttatcatctaaactgt
tctaattgtatacttactaactgtattagaggagtagccaaaggagaacaagttatcata
gtaaaacagcctgcttttgtaatgctgcccgttgaaatagctgaagcatggtatgacgag
actgctttagaattattacaacgtattaatacggctcttagccgtcctaagagaggcttg
agcctaattatcctgggtatagtatctttaatcaccctaatagctactgctgttacggct
tgcgtatctttagcacaatccattcaagctgcacatacagtggattccttatcatataat
gttactaaagtaatgggaactcaagaggatatagataagaaaatagaagataggttatca
gctctgtatgatgtagttagagtcctaggagaacaagttcagagcattaattttcgcatg
aaaatccagtgtcatgctaattataaatggatttgtgttacaaaaaagccttataatact
tctgattttccatgggataaagtaaaaaaacatttgcaaggaatttggttcaatactaat
ctatcgttagatcttttacaactacataatgaaattcttgacattgagaattcgccaaag
gctaccttaaatatagccgataccgtcgataatttcttgcaaaatttattttctaatttc
cctagtcttcattcattgtggaaaaccctgatcggtctaggaatatttgtgataattatt
gctatcgtaatctttgtatttccctgtgtcgttcgtggtctcgttcgtgattttttaaag
atgagagttgaaatgctacatatgaaatatagaactatgttacaacaccgacatctaatg
gagcttttaaagaataaagagaggggagctgcgggggacgacccgtga
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