Viruses: 1497032
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Entry
1497032 CDS
T40000
Symbol
U30, HhV6Bgp036
Name
(RefSeq) Human betaherpesvirus 6B; capsid assembly protein
Virus
32604
Human betaherpesvirus 6B
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
Herpes_U30
SPACA7
MACPF_D2
Motif
Other DBs
NCBI-GeneID:
1497032
NCBI-ProteinID:
NP_050211
RS:
NC_000898
UniProt:
Q9QJ38
A0A2L2QDM0
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Position
NC_000898:42999..46247
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AA seq
1082 aa
AA seq
DB search
MTHDNRQLLPQETKLVTPNKDTLSSRYLHVLIIDNTLSTIEFVYMVVKAVLTQADTLKAF
EQRKNRPTNRILGLSTSVSKRYINIPKFSSSGANNSQGVKTLAAIRKFSLPDKNCFRNFL
SFSTTLFKVPASIDIYFLFFTASTVSTMAARALDLEFILSSLKNSTSPESLLAATAKIEI
LSLAADSVTHNRVIAFINRLPPKKYHFDLIREYTVFYFLNSTTLTSENKLLSAELLHEEL
SQIRSSSSPGTELENLNNAEVLYVFDRILNSIKMLKNELSSPIGKLRVQPAANDPGTDKT
IKYSKIQSIIQKVHSFTRENSLLANCRAVVELIDDLYRKLYSWFLHILTFEDIQFPGDTF
LDRLLKMDYCFTYYPSSNRHLIDLFEKTLDNQTSTDIDKFFDTSGNSPELLYQKTFSLKI
FSKNLTAQDNGLYIYPLLKTDLSILDFLGTENILFHRGLIYHILHQKTIPQERENDLNKI
NQFFATVIQQVIETRSSCLPASLSRLLDTIFHFNRIGLNIETCRIYVEILSNHMATPDTQ
PIINTFTINLIHIVFTAHVFFICMENFSPTFLFYNRKKLILEQQRAILIIERNEYSTLWK
QISDHIDCLFNISLSESFFKEYTKGGNEEHKQFLYKNLFEKWGDVFFPFTYSVTTSKNST
AHHITTLELRAICKEVYQSDSPEAYESLLPYSTHPAFKTLFIKIYVIPMVTYITNLTFDK
LQSDYRLITLIHACKLLLPSQHLLLHYMVWLYAFSINVDHIDLGTFTVIKSVIFKIADHI
NVMTHTIYSPETNLLVSILLNAYTDYLQKYVNPWIKQTITANFSLLQTYITFTKQCASIL
ATKCNINLDNLFISMTIGTDKIVTTSFCSFIATCRNLVRQHEEFKKSLKTIETSKTTLTN
MLLNIITSVSSSKELLTNEALQKFIDTVQRISQHVNETYQLISVNLEKCKISNDILIESL
KKTISIVDVLSSDAILNTSLTSRCLEAATLAVSNNSFTILEIKKDAVAVFKPFITQLFES
MKPTTSLYKKLMATQKLTTDRIPFLDIFDDRYNLVRHVERQLNWYAAYAEAAQQDLIAPL
TF
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatgacaacagacaactgctgccgcaagaaactaagctcgtcacaccaaacaaa
gacactttgtcttccaggtacttacacgtgttgatcatcgataacacgttatcaaccatt
gagtttgtatacatggtagttaaagcggttctcacgcaagcagacacattgaaagcgttc
gaacaaaggaaaaacagacccacaaacagaattttagggttgtccacatcagtctcaaaa
cgatacatcaacattcccaaattttcgagctccggagccaataattcgcaaggcgtgaaa
acccttgccgctatacgtaaattctccctgccggacaaaaactgtttcagaaatttcctt
tctttttctacaacattatttaaggttcccgcctcgatagatatatattttctcttcttc
acagcttccacagtatccacaatggcagctcgtgcactcgatttagagttcattcttagt
tcactcaaaaacagcacgtccccagaatcattactagccgctacggcaaaaatcgagatt
ttatccctggcagccgatagcgtaacacacaacagagtaatagcttttattaatcgactg
cccccgaaaaaatatcactttgaccttatcagggaatatacagttttctactttttaaac
tctacgaccttaacatcagaaaataaattgctctccgcagaacttttacacgaagaactc
agtcaaattcgctcttcgagttcgccgggcacagaacttgaaaacttaaataatgcagag
gtcctttacgtgttcgatcgaatactcaattccattaaaatgctaaaaaatgagttatcg
tctccaatcggcaaacttcgagtacaacccgccgccaacgacccaggtaccgataaaacg
ataaaatactccaagattcaatccatcatacaaaaggtacacagctttacacgagaaaat
tcacttcttgccaactgccgcgccgtcgtagaactgatagacgatctatatcggaaactt
tactcatggtttctacatattctcactttcgaggacattcagtttccaggcgacacattt
ctagacaggctgttgaaaatggactactgttttacatattacccttcttcaaatcgccat
ctaatagatcttttcgaaaagacgttggacaatcaaacatccacagacatcgataaattt
tttgacacttcaggaaacagtccagaactactttatcaaaaaacgtttagcttgaaaata
ttttcaaaaaatctcacagcccaggacaatggattatatatctatccactacttaaaacc
gacctgtccatcctcgacttcctcggaaccgaaaatattctcttccatcgaggtctcatc
tatcacatacttcatcaaaaaacaatccctcaagaacgggagaatgatctcaataaaatc
aatcaatttttcgctactgtcatccagcaggttatcgaaacgagaagctcatgcttaccc
gcgtcgttatcccgactcttagatacgatttttcacttcaacagaatcggtttaaacata
gaaacgtgcagaatctacgtcgagatcctctcaaaccacatggcgacaccagacacccaa
cccataatcaatacattcaccatcaacttaatccatattgttttcaccgcgcacgtgttt
ttcatctgcatggaaaatttcagcccgacattcttattctataataggaaaaaactcata
ttagaacaacagagagccattttgatcatcgaacgaaatgaatattccacactctggaaa
caaatatctgatcacatcgactgtctcttcaacatctctctctccgaatccttttttaaa
gaatataccaaaggaggaaacgaagaacataaacagtttctatacaaaaacctattcgaa
aaatggggtgacgtctttttccctttcacgtactcggtaaccacctcaaaaaactccacg
gcacaccatattacaacccttgagctaagggccatctgcaaagaggtctatcagagcgat
tccccggaggcatacgaatcgttacttccctacagcactcatccagcttttaaaacatta
ttcattaaaatctacgttatacctatggtcacatacattaccaatcttacctttgataaa
ttacaatctgattacagactcataactctgatccacgcctgtaaactcctactcccctcg
caacatctactactacactacatggtgtggctatacgctttttccataaacgtagaccac
atagatctaggcactttcaccgtaataaagtccgtaatctttaaaatcgctgaccacata
aacgtgatgacgcatacgatctactcccctgagacaaaccttctcgtaagcattctacta
aacgcgtataccgactaccttcaaaaatacgtaaacccctggatcaaacagaccataacg
gcaaacttctccctgttacagacgtacataaccttcacgaaacaatgcgccagcatctta
gcgaccaaatgcaacataaacttagacaatctatttatctccatgactatcggaacagac
aaaattgtaaccacttcgttttgctccttcatcgctacatgcagaaatttagtacgtcaa
cacgaagaattcaaaaaatcactaaaaacgatcgaaacttccaaaaccacactcacgaat
atgctactaaacataatcacaagcgtctcctcctccaaggagctgctgaccaacgaagca
ctacaaaaattcatcgacactgtccaacgcatctcccaacacgtaaacgaaacataccaa
ttaatttccgtgaacctcgaaaaatgtaaaatctcaaacgacatcctaatcgaatcccta
aagaagaccatctccatagttgatgtactcagctccgatgcaatcctaaacacgtcgtta
acttctagatgtctggaggccgccacgctcgcggtttcaaacaattctttcacaatactc
gaaattaaaaaggacgcagttgccgttttcaagccttttataacacaactatttgaaagc
atgaaacccaccacgagtctatataagaaattgatggctacccaaaaactgaccaccgac
cgcattccatttctcgatatcttcgacgataggtacaacctagtcagacacgtcgaacga
caattaaactggtacgccgcatatgccgaagcagcgcagcaagatcttattgctcctctt
acgttttaa
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