Viruses: 1497042
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Entry
1497042 CDS
T40000
Symbol
U40, HhV6Bgp045
Name
(RefSeq) Human betaherpesvirus 6B; transport/capsid assembly
Virus
32604
Human betaherpesvirus 6B
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
PRTP
Motif
Other DBs
NCBI-GeneID:
1497042
NCBI-ProteinID:
NP_050221
RS:
NC_000898
UniProt:
P52544
A0A2L2Q8V7
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Position
NC_000898:complement(63154..65334)
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AA seq
726 aa
AA seq
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MNSLQSLCVLCARLNECALDLECLKFCDPVIVLSDMANFKKNGIVILHLYQTFFEGIKEQ
NLLCASALTVYMQVLLKAMYEQVLLLDAALESFMVDQDRKKYFEKVLCLKRCAEHLSINI
SLNNGVEFIVQLSTLNDIEQLISKINSVYALLLPQEGLQICGKIIDLLTIMCGACMVAKP
ESYLETKTCMKCYEELTLTPNQGKSLRKRLHGKFCNHLTEQKAFFNIEKNIETIEKDLGE
AILNYGTIQSVVTEIKKIFKQQRSAESLHVSDAEKTLKKYNIFSKVPDVIYSLSEFTYWS
KISETIVRNVAITLQQLNSCHTLYKQLQNDVSLYLYGEVSEDFLALSENLLTHDERLYVG
SIYVSPSRLIDLVTGLSIKNLEESPIFKRLAEEDEVQHKIKSLLHDIRDPQTTETPGRLN
TINCMLQTHNLQQEVLARKKAYFQKVSESGYNRVMACIREQESLINKVVSVNVYGNFIFE
ALSKIMNGFVLRKMYLDGSIRVDSCTYDEHLYIKNNLMPKKLPLELLPDLSEIMYTLLTG
PLSDFHKSAYPLPANISMAYGCDHAEMLPHMKEDLARCIEGTIHPSVWMVCEYNEFFNFS
GVTDVNDMQKKMWNFIRELTLSVALYNDVFGKRLKIVRIDEEEDLNGNVVLTFNHESPLL
FHTGGGMTKFKDVYSLLYCDLQAQLSRETVDVPEGVSYSVRTPNLLDLVRENEQDESIIP
GCLFDE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgttacaatctctgtgtgtgttgtgcgctaggcttaatgaatgtgctttggac
cttgaatgtttaaagttttgtgatcctgtaatagtattgtctgatatggcaaatttcaaa
aagaatgggattgtcattctgcatttatatcaaactttttttgaaggtatcaaagaacag
aatcttctttgtgcgtcagctttgacggtttatatgcaggtgctgctaaaagctatgtat
gaacaggtgcttcttttggatgcagcgttggaaagctttatggtagaccaggatagaaaa
aaatattttgaaaaggtgttgtgtttgaaacgttgtgctgagcacttgtcaataaacatt
tcattaaataacggtgttgagtttatcgtgcaattatctacgctaaatgatatagaacaa
ttaatcagtaagatcaactccgtatatgctttacttctgccccaagaagggttgcagatt
tgcggaaaaattatagacttgctaactatcatgtgtggcgcatgtatggttgcgaaaccg
gagagttatctcgaaaccaagacttgcatgaagtgttatgaagaattgactttgactcca
aaccaaggaaaatcacttcggaaaagattacatggaaagttctgtaatcatttgaccgag
caaaaagctttttttaatattgaaaaaaatattgagacgatagaaaaagacttaggagag
gccattttgaactatgggactattcagtctgttgtgactgaaatcaagaagatttttaag
cagcagcgttcagccgaatcgttgcatgttagtgatgctgagaaaactctgaaaaagtat
aatatttttagcaaggtacctgacgtgatatattctttaagtgagtttacgtattggtct
aaaatatcagaaacgatagtaagaaatgttgctattacgcttcagcagttaaatagttgt
cacacgttgtataagcaattacagaatgatgttagtctttatctttacggtgaagtctct
gaagacttcttggctttgagtgaaaatttgctcacgcatgacgagcgcttgtacgttggc
tctatttatgtgtctccttcgaggttgatagatcttgtcactggtctgagcattaaaaat
ctcgaggaaagtccaatatttaaaagattggctgaggaagatgaggttcaacataaaatt
aagagtctgttgcatgacattcgggatccacagacgacagaaacaccgggaaggctgaac
acgatcaattgcatgcttcaaactcataatcttcagcaggaagtcttggctcggaaaaag
gcgtattttcaaaaggtttctgaatctggttataatagggtgatggcatgtattcgagag
caggaatcactcatcaataaggtagtgagtgtgaacgtgtatgggaattttatttttgag
gctttatcgaagattatgaacggtttcgttctcagaaaaatgtacttggatggctctatt
cgtgtagatagctgtacatacgatgaacatctttatattaaaaataatctgatgccgaag
aagctccctttggagcttttgccggatttaagtgagattatgtacacattgttaacgggt
ccgttatcggattttcataaatctgcctatccacttccggcgaatatctcaatggcgtat
ggttgcgaccacgcagaaatgttaccgcatatgaaggaagatttagcgagatgcatagag
ggcactattcatcccagtgtgtggatggtgtgcgaatataatgagttttttaacttttcc
ggtgtaactgatgtaaatgacatgcagaaaaaaatgtggaatttcatcagagagttaaca
ctttctgttgcactatataatgatgttttcggaaagcgattaaaaattgtacgtatagat
gaggaggaggatttgaatggaaatgtcgttttgacatttaatcacgagtctcctctatta
tttcacaccggtggtggcatgacaaagtttaaagacgtgtattcgctgttatattgtgat
ttgcaagctcagttgtcgagggagactgtagacgtgccggaaggagtaagttactctgtt
cgaacgcctaatctactagatctcgttagggagaatgagcaagatgagagtattattcct
ggctgtctttttgatgaatag
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