KEGG   Viruses: 18748672
Entry
18748672          CDS       T40000                                 
Symbol
SP, F782_44812gpSP
Name
(RefSeq) Madariaga virus; structural polyprotein
  KO
K19288  Alphavirus structral polyprotein
Virus
1440170  Madariaga virus
SSDB
Motif
Pfam: Alpha_E1_glycop Alpha_E2_glycop Peptidase_S3 Alpha_E3_glycop
Other DBs
NCBI-GeneID: 18748672
NCBI-ProteinID: YP_009020571
RS: NC_023812
UniProt: W8R6J5
LinkDB
Position
NC_023812:7541..11269
AA seq 1242 aa
MFPYPTLNYPPMAPVNPMAYRDPNPPRRRWRPFRPPLAAQIEDLRRSIANLTFKQRAPNP
PAGPPAKRKKPAPKPKPAAPKKKRQPPPAKKQKRKQKPGKRQRMCMKLESDKTFPIMLKG
QVNGYACVVGGRVFKPLHVEGKIDNEQLAAIKLKKASIYDLEYGDVPQCMKSDTLQYTSE
KPPGFYNWHHGAVQYENNRFTVPRGVGGKGDSGRPILDNRGRVVAIVLGGANEGSRTALS
VVTWNQKGVTVKDTPEGSEPWSLTTVMCVLANITFPCDQPPCMPCCYEKNPHETLSMLEQ
NYDSQAYDLLLDAAVKCNGRRTRRDLETHFTQYKLARPYIADCSNCGHGRCDSPIAIEDI
RGDAHAGYIRIQTSAMFGLKSDGVDLAYMSFMNGKTLKAIKIEHLYARTSAPCSLVSYHG
YYILAQCPPGDTVTVGFQDGANKHMCTIAHKVEFKPVGREKYRHPPEHGVELPCTKYTHK
RADQGHYVEMHQPGLVADHSLLSMSSTKVKITVPSGSQVKYYCKCPDVKEGTTGSDYTTA
CTNLKQCRAYLIDNKKWVYNSGKLPRGEGETFKGKLHVPFVPVTSKCTATLAPEPLVEHK
HRSLILHLHPEHPTLLTTRALGSNARPTRQWIEQPTTVNFTVTGEGFEYTWGNHPPKRVW
AQESGEGNPHGWPHEIVIYYYNRYPMTTVIGLCTCVAIIMVSCVTSVWLLCRTRNLCITP
YRLAPNAQVPILLAVLCCVKPTRADDTLQVLNYLWNNNQNFFWMQTLIPLAALIVCMRML
RCLLCCGPAFLLVCGALGAAAYEHTAVMPNKVGIPYKALVERPGYAPVHLQIQLVTTKII
PSANLEYITCKYKTKVPSPVVKCCGSTQCSAKSHPDYQCQVFTGVYPFMWGGAYCFCDTE
NTQMSEVYIERAEECSVDQAKAYKVHTGTVQAVVNITYGSVSWRSADVYVNGETPAKIGD
AKLTIGPLSSAWSPFDSKVVVYGHEVYNYDFPEYGTGKAGSFGDLQSRTPTSNDLYANTN
LKLQRPQPGVVHTPYTQAPSGFERWKKDRGAPLNDIAPFGCTIALDPLRAENCAVGNIPL
SIDIPDAAFTRIAETPTVSDLECKVTECTYASDFGGIATISYKASKSGNCPIHSPSGIAV
IKENDVTLADSGAFTFHFSTASIHPAFKMQVCTSVVTCKGDCKPPKDHIVDYPAQHTETY
TSAVSATAWSWLKVLVGSTSAFIVLGLIATAVVALVLFTHRH
NT seq 3729 nt   +upstreamnt  +downstreamnt
atgtttccgtatccaacattgaactacccgcctatggcaccggttaatccgatggcatac
agggaccccaatccaccaagacgtaggtggcggccatttcggccgcccctagctgctcaa
atcgaggatttgagacgttccatcgctaacctaacgtttaagcaaagggccccgaacccg
ccagcaggccccccggcaaaacgtaagaagccagcacctaaaccgaagccagcggcgccc
aagaaaaagaggcaaccacctccagctaagaagcagaagcgcaaacaaaagcctggtaaa
cggcaaaggatgtgtatgaaactggaatccgacaagactttccccatcatgttgaaaggc
caagtgaacggctatgcgtgcgtagtcggcgggcgcgtgttcaaaccgctgcatgttgaa
ggcaagattgacaacgaacagttggccgccattaaactgaagaaagcaagtatctatgat
ctcgagtatggcgatgttccacaatgtatgaaatcggacaccctccagtacaccagtgag
aagccgccgggtttctacaattggcaccacggagcagtgcagtatgaaaacaacaggttt
accgtaccacgaggagtgggcggaaaaggggatagcggacgcccgattttagacaatcgc
ggccgtgtggtcgctatagtactgggcggagctaacgaaggatctcgcacagcgctgtca
gtggtcacgtggaaccagaaaggggttaccgtgaaggatacccccgaaggttccgaacct
tggtcactgactacagttatgtgcgtcttagctaacatcaccttcccatgtgaccagcca
ccctgtatgccctgctgttatgagaaaaatccgcacgagacgctcagcatgctcgaacag
aactatgacagccaggcttatgacctactgctggacgcggccgtcaaatgtaacggcagg
agaacccgtagagacctggaaactcatttcacacagtacaagctagctcgcccatacata
gcagactgctccaattgcggccacggcagatgcgatagtcccattgccattgaggacatt
cgcggagacgctcatgcaggctacatccgaatacaaacatcggcaatgttcggcctgaag
tcggatggagtagatctagcctatatgagcttcatgaacggcaaaaccctgaaggccata
aaaatagaacatttgtatgctcgtacatcagcaccatgctctctggtttcctaccatggt
tactacatccttgcccagtgtcctcccggagacactgtgacagtggggtttcaagacggt
gccaacaagcacatgtgcaccattgcccataaagttgagttcaaacctgtaggaagagag
aagtaccgccatccacctgaacacggcgtggagttaccctgcaccaagtacacgcacaaa
cgtgcagaccagggccactacgtcgaaatgcaccaaccagggctggtagccgaccactcg
ctactgagcatgagcagcacgaaagtgaaaatcaccgtcccaagtggttctcaagtgaag
tactactgtaagtgccccgacgtaaaggagggaacaaccggcagcgactacacgactgct
tgcacgaacctgaagcagtgtagagcgtatcttattgacaataagaaatgggtctacaac
tctggcaagttacctagaggagaaggcgaaacctttaaaggtaaactccatgtgccgttc
gtcccggtcacgagcaagtgtaccgcgaccttggcccccgaaccactggtggaacacaag
catcgatccctaatcctacacctgcacccagaacacccaacactactgacgaccagagca
ctgggaagtaacgcgaggccgacaaggcagtggatcgaacaaccaaccacagtcaatttt
acagtaacaggagaaggttttgaatatacctggggcaaccacccgcccaaacgagtttgg
gcccaagaatcaggtgaaggaaatcctcatggttggccgcacgaaatagtaatttattac
tacaaccggtatccaatgacaactgtcattggactgtgcacgtgcgtagccatcatcatg
gtttcctgtgttacatctgtatggcttctttgccgcactcgcaatctttgcataacacca
tacagattagcacctaacgcccaggtacccatcttattagcagtcctatgctgcgtgaaa
ccaaccagagcagatgacactttgcaggtcctaaattatctgtggaataacaaccagaac
ttcttttggatgcagacccttataccactggcagctttgatagtgtgcatgcgcatgttg
cgctgcttactatgctgcggtccggcttttttacttgtctgcggcgccttgggcgccgca
gcatacgaacacacagcagtgatgccgaacaaggtggggatcccctacaaagcgctggtt
gaacgcccgggctatgcaccagtccacctgcaaattcagttggtaactactaaaatcatt
ccgtcagcgaatctggaatatatcacctgcaagtataaaaccaaggtgccctctcctgta
gtcaaatgctgcggctccacccagtgctcagcaaaatcacaccctgactaccaatgtcaa
gtgttcacaggggtctacccatttatgtggggaggagcctattgcttctgcgataccgag
aatacgcagatgagcgaagtgtacattgaacgcgccgaggaatgttcagtcgaccaggct
aaggcatacaaggtgcacactggcacagtgcaggcggtggtcaatatcacctacgggagc
gtcagctggcgatcggctgacgtttacgtcaacggtgaaacacctgcaaagatcggcgat
gccaaattaactataggacctttgtcctccgcctggtctccattcgactcaaaggtcgta
gtgtatgggcacgaggtgtacaattatgactttccagaatacggcacaggaaaagccggt
tcctttggtgatctgcaatccagaacacccaccagtaacgacttgtacgccaatacaaac
ctgaagttgcaacgaccacaaccaggagtagtccatacgccttatacccaggcgccatcc
gggttcgaacgctggaagaaagaccgaggagctccattgaatgacatcgctccctttggg
tgcacgatagctttagacccactgcgagcggagaactgcgctgtgggcaacatccccctt
tctatagacatcccggatgccgcatttaccaggatcgcagagacgcccactgtgtccgac
ctggaatgcaaggttactgaatgcacatacgcatccgacttcgggggaattgccaccatc
agctataaggcaagcaaatcaggtaactgccccattcactccccgtcaggcattgcagta
atcaaagaaaacgatgttacactggcagacagcggtgccttcacgtttcacttttctaca
gccagcatccacccggcattcaaaatgcaggtgtgtactagcgtagttacctgcaaaggt
gactgtaagccaccaaaggaccacattgtcgattacccggctcaacacacagaaacgtac
acatcagcagtatcggcaactgcttggtcatggctgaaagtgctagtgggaagcacatca
gcatttattgtgctggggttgattgccactgcagtggtcgccctggtactattcacccac
agacactaa

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