Viruses: 18748672
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Entry
18748672 CDS
T40000
Symbol
SP, F782_44812gpSP
Name
(RefSeq) Madariaga virus; structural polyprotein
KO
K19288
Alphavirus structral polyprotein
Virus
1440170
Madariaga virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
Alpha_E1_glycop
Alpha_E2_glycop
Peptidase_S3
Alpha_E3_glycop
Motif
Other DBs
NCBI-GeneID:
18748672
NCBI-ProteinID:
YP_009020571
RS:
NC_023812
UniProt:
W8R6J5
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Position
NC_023812:7541..11269
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AA seq
1242 aa
AA seq
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MFPYPTLNYPPMAPVNPMAYRDPNPPRRRWRPFRPPLAAQIEDLRRSIANLTFKQRAPNP
PAGPPAKRKKPAPKPKPAAPKKKRQPPPAKKQKRKQKPGKRQRMCMKLESDKTFPIMLKG
QVNGYACVVGGRVFKPLHVEGKIDNEQLAAIKLKKASIYDLEYGDVPQCMKSDTLQYTSE
KPPGFYNWHHGAVQYENNRFTVPRGVGGKGDSGRPILDNRGRVVAIVLGGANEGSRTALS
VVTWNQKGVTVKDTPEGSEPWSLTTVMCVLANITFPCDQPPCMPCCYEKNPHETLSMLEQ
NYDSQAYDLLLDAAVKCNGRRTRRDLETHFTQYKLARPYIADCSNCGHGRCDSPIAIEDI
RGDAHAGYIRIQTSAMFGLKSDGVDLAYMSFMNGKTLKAIKIEHLYARTSAPCSLVSYHG
YYILAQCPPGDTVTVGFQDGANKHMCTIAHKVEFKPVGREKYRHPPEHGVELPCTKYTHK
RADQGHYVEMHQPGLVADHSLLSMSSTKVKITVPSGSQVKYYCKCPDVKEGTTGSDYTTA
CTNLKQCRAYLIDNKKWVYNSGKLPRGEGETFKGKLHVPFVPVTSKCTATLAPEPLVEHK
HRSLILHLHPEHPTLLTTRALGSNARPTRQWIEQPTTVNFTVTGEGFEYTWGNHPPKRVW
AQESGEGNPHGWPHEIVIYYYNRYPMTTVIGLCTCVAIIMVSCVTSVWLLCRTRNLCITP
YRLAPNAQVPILLAVLCCVKPTRADDTLQVLNYLWNNNQNFFWMQTLIPLAALIVCMRML
RCLLCCGPAFLLVCGALGAAAYEHTAVMPNKVGIPYKALVERPGYAPVHLQIQLVTTKII
PSANLEYITCKYKTKVPSPVVKCCGSTQCSAKSHPDYQCQVFTGVYPFMWGGAYCFCDTE
NTQMSEVYIERAEECSVDQAKAYKVHTGTVQAVVNITYGSVSWRSADVYVNGETPAKIGD
AKLTIGPLSSAWSPFDSKVVVYGHEVYNYDFPEYGTGKAGSFGDLQSRTPTSNDLYANTN
LKLQRPQPGVVHTPYTQAPSGFERWKKDRGAPLNDIAPFGCTIALDPLRAENCAVGNIPL
SIDIPDAAFTRIAETPTVSDLECKVTECTYASDFGGIATISYKASKSGNCPIHSPSGIAV
IKENDVTLADSGAFTFHFSTASIHPAFKMQVCTSVVTCKGDCKPPKDHIVDYPAQHTETY
TSAVSATAWSWLKVLVGSTSAFIVLGLIATAVVALVLFTHRH
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgtatccaacattgaactacccgcctatggcaccggttaatccgatggcatac
agggaccccaatccaccaagacgtaggtggcggccatttcggccgcccctagctgctcaa
atcgaggatttgagacgttccatcgctaacctaacgtttaagcaaagggccccgaacccg
ccagcaggccccccggcaaaacgtaagaagccagcacctaaaccgaagccagcggcgccc
aagaaaaagaggcaaccacctccagctaagaagcagaagcgcaaacaaaagcctggtaaa
cggcaaaggatgtgtatgaaactggaatccgacaagactttccccatcatgttgaaaggc
caagtgaacggctatgcgtgcgtagtcggcgggcgcgtgttcaaaccgctgcatgttgaa
ggcaagattgacaacgaacagttggccgccattaaactgaagaaagcaagtatctatgat
ctcgagtatggcgatgttccacaatgtatgaaatcggacaccctccagtacaccagtgag
aagccgccgggtttctacaattggcaccacggagcagtgcagtatgaaaacaacaggttt
accgtaccacgaggagtgggcggaaaaggggatagcggacgcccgattttagacaatcgc
ggccgtgtggtcgctatagtactgggcggagctaacgaaggatctcgcacagcgctgtca
gtggtcacgtggaaccagaaaggggttaccgtgaaggatacccccgaaggttccgaacct
tggtcactgactacagttatgtgcgtcttagctaacatcaccttcccatgtgaccagcca
ccctgtatgccctgctgttatgagaaaaatccgcacgagacgctcagcatgctcgaacag
aactatgacagccaggcttatgacctactgctggacgcggccgtcaaatgtaacggcagg
agaacccgtagagacctggaaactcatttcacacagtacaagctagctcgcccatacata
gcagactgctccaattgcggccacggcagatgcgatagtcccattgccattgaggacatt
cgcggagacgctcatgcaggctacatccgaatacaaacatcggcaatgttcggcctgaag
tcggatggagtagatctagcctatatgagcttcatgaacggcaaaaccctgaaggccata
aaaatagaacatttgtatgctcgtacatcagcaccatgctctctggtttcctaccatggt
tactacatccttgcccagtgtcctcccggagacactgtgacagtggggtttcaagacggt
gccaacaagcacatgtgcaccattgcccataaagttgagttcaaacctgtaggaagagag
aagtaccgccatccacctgaacacggcgtggagttaccctgcaccaagtacacgcacaaa
cgtgcagaccagggccactacgtcgaaatgcaccaaccagggctggtagccgaccactcg
ctactgagcatgagcagcacgaaagtgaaaatcaccgtcccaagtggttctcaagtgaag
tactactgtaagtgccccgacgtaaaggagggaacaaccggcagcgactacacgactgct
tgcacgaacctgaagcagtgtagagcgtatcttattgacaataagaaatgggtctacaac
tctggcaagttacctagaggagaaggcgaaacctttaaaggtaaactccatgtgccgttc
gtcccggtcacgagcaagtgtaccgcgaccttggcccccgaaccactggtggaacacaag
catcgatccctaatcctacacctgcacccagaacacccaacactactgacgaccagagca
ctgggaagtaacgcgaggccgacaaggcagtggatcgaacaaccaaccacagtcaatttt
acagtaacaggagaaggttttgaatatacctggggcaaccacccgcccaaacgagtttgg
gcccaagaatcaggtgaaggaaatcctcatggttggccgcacgaaatagtaatttattac
tacaaccggtatccaatgacaactgtcattggactgtgcacgtgcgtagccatcatcatg
gtttcctgtgttacatctgtatggcttctttgccgcactcgcaatctttgcataacacca
tacagattagcacctaacgcccaggtacccatcttattagcagtcctatgctgcgtgaaa
ccaaccagagcagatgacactttgcaggtcctaaattatctgtggaataacaaccagaac
ttcttttggatgcagacccttataccactggcagctttgatagtgtgcatgcgcatgttg
cgctgcttactatgctgcggtccggcttttttacttgtctgcggcgccttgggcgccgca
gcatacgaacacacagcagtgatgccgaacaaggtggggatcccctacaaagcgctggtt
gaacgcccgggctatgcaccagtccacctgcaaattcagttggtaactactaaaatcatt
ccgtcagcgaatctggaatatatcacctgcaagtataaaaccaaggtgccctctcctgta
gtcaaatgctgcggctccacccagtgctcagcaaaatcacaccctgactaccaatgtcaa
gtgttcacaggggtctacccatttatgtggggaggagcctattgcttctgcgataccgag
aatacgcagatgagcgaagtgtacattgaacgcgccgaggaatgttcagtcgaccaggct
aaggcatacaaggtgcacactggcacagtgcaggcggtggtcaatatcacctacgggagc
gtcagctggcgatcggctgacgtttacgtcaacggtgaaacacctgcaaagatcggcgat
gccaaattaactataggacctttgtcctccgcctggtctccattcgactcaaaggtcgta
gtgtatgggcacgaggtgtacaattatgactttccagaatacggcacaggaaaagccggt
tcctttggtgatctgcaatccagaacacccaccagtaacgacttgtacgccaatacaaac
ctgaagttgcaacgaccacaaccaggagtagtccatacgccttatacccaggcgccatcc
gggttcgaacgctggaagaaagaccgaggagctccattgaatgacatcgctccctttggg
tgcacgatagctttagacccactgcgagcggagaactgcgctgtgggcaacatccccctt
tctatagacatcccggatgccgcatttaccaggatcgcagagacgcccactgtgtccgac
ctggaatgcaaggttactgaatgcacatacgcatccgacttcgggggaattgccaccatc
agctataaggcaagcaaatcaggtaactgccccattcactccccgtcaggcattgcagta
atcaaagaaaacgatgttacactggcagacagcggtgccttcacgtttcacttttctaca
gccagcatccacccggcattcaaaatgcaggtgtgtactagcgtagttacctgcaaaggt
gactgtaagccaccaaaggaccacattgtcgattacccggctcaacacacagaaacgtac
acatcagcagtatcggcaactgcttggtcatggctgaaagtgctagtgggaagcacatca
gcatttattgtgctggggttgattgccactgcagtggtcgccctggtactattcacccac
agacactaa
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