KEGG   Viruses: 32708019
Entry
32708019          CDS       T40000                                 
Symbol
CAU81_sLgp1
Name
(RefSeq) Caraparu virus; RNA-dependent RNA polymerase
  KO
K25345  Peribunyaviridae RNA-directed RNA polymerase L [EC:2.7.7.48 3.1.-.-]
Virus
192196  Caraparu virus
SSDB
Motif
Pfam: Bunya_RdRp L_thumb_ring_vir L_protein_N DUF3979
Other DBs
NCBI-GeneID: 32708019
NCBI-ProteinID: YP_009362063
RS: NC_034489
LinkDB
Position
NC_034489:47..6793
AA seq 2248 aa
MAILLEDVIRQYSARIRNCNNPEIGRDILAEITMTRHNYFAQKFCEAIGIEYRNDVPAAD
IVLEMMPGLDLTRIRIPNITPDNYYRDGTKIYIIDFKVSVSDESAQHTYKKYDTLFGDVF
NQLNIEYEVVIIRMNPSDMHLHISSDNFAALFPNITLNVTFDWYFRLRDDLFHQFRDNEE
FMELIAHGEFTPTIPWVNENTPELFDHEVFQDFIASMPLENREDFYYALNHNAFQSDKWN
DLLHVIMRKYGDRYHDFVKANARRIFLTDDKYNRPTKEAILQGWKEMIERVQEQREIIDD
LSKQKPSIHFIWGPNSKNESNENNTKIIRLSKNLQSIKEKDSFSVAFKNIGLLMDFSEDI
DKYEAFCAKLKADARSSLKPKSKKIDPIKIGPSTILWEQQFKMDTDIIPKEIRLKFLKEF
CGIGNHKQFKDRMMEDLDLDKPKILNFENQDIKNQAYAMMQNTSYFMSKPSNLVKVGNVL
EEFKDKIVNANEETWATIEEIAKTRYWQSINDFSVLIKNILAVSQYNKHNTFRIVCTANN
NFFGLVYPSTSIQSKRSTIVFSTIVLHDNESDVLKCGALYKTYRIKNGYLSISKAIRLDK
ERCQRLVISPGLFMLTSLLFKGDCDVSLNDVMNFAFFTSLSITKSMLSLTEPSRYMIMNS
LALSSHVREYIAEKFSPYTKTLFAVYMTDLIKRGCMAANDQRQQISIKDVFLNEFEITQK
GVTNDRNLQSIWFPGKVNLKEYINQIYMPFYFNAKGLHNKHHVMIDLAKTVLEIELDQRV
NLPTPWGVDLKKQSVNLDVLIFSIAKMLNLDTSRHNHLRSRVENRNNFKRSLASISTFTS
SKSCIKVGDFKEFKERNALHMKKLQGKEAKKTRIANTEFVSDNDRDLEIVHSTYLDLRKS
VPNYTDYMSTKVFDRLYERFKNHDFEDKPAIEIIMDVMRCHTDFKFCFFNKGQKTAKDRE
IFVGELEAKLCLYGVERIAKERCKLNPDEMISEPGDGKLKKLEINGESEIRYLIDATRNQ
TREQSKVDDLLDTPKGIKLEINADMSKWSAQDVFYKYFWLIALDPILYPFEKQRIIFFFC
NYMNKELILPDEMMCSLLDQKAQRENDLIRQMTNGFTTNTVNIRRNWLQGNLNYTSSYIH
SCSMMVFKDILKEVSALLEGRCNVNSMVHSDDNQTSVIMVQDKLHNDIITNFVCNTFERC
CLTFGNQANMKKTYITNHIKEFVSLFNIYGEPYSVYGRFLLPAVGDCAYIGPYEDMASRL
SATQTAIKHGCPPSLAWVSIALNHWITFNTYNMLPGQINDPTKVFHFERRELPIELCGLL
QADLSTIALVGLESGNISFLTSLLKRMSPPQLVKESVQAQCQNIESWDLNSLSESEIMKL
KILRYVVLDSEVREDSTMGETSDMRSRSLITPRKFTTPASLERLVSYKDFQEILADPTRT
EDLLETMINNPELLVTKGENSEEFMTTILYRYNSKKFKESLSIQSPTQLFIEQILFANKP
VIDYTGIQDRYLSILDVPRVQENEGIIGRKTIPETFVAIKRDLSLMNLDHKDIKLVYSFC
ILNDPLNTTACNAILLSQVQSLMDRSSLSAVTMPEFRNMKLIRYSPALVLRAYIHNNLTI
AGANENAMRRDLFHLQEFINQTKIKERLDKRIQDNEEIKGERDRMFEIKETTKFYQACYD
YIKSTEHRVKVFILPMKAYTAFDFCATIHGNLMKDKGWFAVHYLKQIVSGTAKASVSQAP
ASEMIIVGECFRLIAHFCDTFIDVGSRLQFLYNIIDNFTYKNIPVKNLLEIMMRTNKRQH
FLPILHWLEELTQHDIDKYDAYKANERVVWNDWQVNRDMNTGNIDLTIKGYQRTLRVIGE
DDTLKIGELEILKGDTTPIETHGRKLLNSKHGLKFEKMQRYKIIEPNTYYICWQNRTRFS
YTYQLLLSNIIEARNSQTVSVTGGKFNELVPVCPVIVSRIDSDDKMNLRQIKYLNMDCSL
TRLQLNQNEFAVVKRCHFSKMVFFNGPEMVVGNINITNLIQTPSLLTTNYPSLSQMPMMT
LTRIFNCNGEEKEVDEFEFLSDEILEETETAVINAQPMFNIQYETKSKKGYTYKRALQEA
LSRGIQEIEHNFDFCKDGFYSPKNIAIIALLVNVIDRLHTNEWSSIIRKSFHMCFFNNGK
DKLFHMMNIPKTFIKNPIGEVPNWEKIRTFIIQLETAYPGNNWHQMFEHFKEKCILLIDR
EIKMEGMSWGEMLDELDDYKDTEMFHFN
NT seq 6747 nt   +upstreamnt  +downstreamnt
atggctattctcttagaagacgttatccggcagtattctgctaggattagaaattgcaac
aatccagagatcggaagagatatcctagcagaaataactatgacaagacataattatttt
gctcaaaagttttgtgaagctatagggattgagtacaggaatgatgtcccagctgcagat
attgttctggaaatgatgccaggattagacttgacacgaattaggattcctaatatcacg
ccagataactattatcgcgatgggacaaagatctatattatagatttcaaggtatcagtt
agtgatgaatcagcccaacatacttacaaaaagtatgatactttgtttggagatgttttc
aatcaattaaacattgaatatgaagtagttataatacggatgaacccaagcgatatgcac
ctacatatttctagtgacaattttgcagcattgtttcccaacattactctcaatgtaaca
tttgattggtacttcagattacgagatgacctgttccatcagtttagggacaatgaggaa
ttcatggaattaattgctcatggagaatttactccaactataccttgggtaaatgaaaat
actcctgaattgtttgaccatgaagtttttcaagactttattgcatcaatgccgttagaa
aatagagaagatttttactatgctttgaatcacaatgcgtttcaatcagacaaatggaat
gacttattacatgtgattatgaggaaatatggtgatagatatcatgattttgtcaaagcc
aatgcaaggaggatatttttaactgatgataaatacaatcggcccacaaaagaagccata
ttgcagggttggaaagagatgattgaaagagttcaagagcaacgtgagatcatagatgat
ttgtccaaacagaagcccagtatccattttatctggggacctaattcaaagaatgaatca
aatgaaaacaataccaaaataatccgcttgtcaaaaaatctacaatctataaaagaaaag
gattctttcagtgttgctttcaagaatataggattattaatggactttagtgaagatatt
gataaatatgaagcattttgtgcaaaattaaaagcagatgctaggtctagtttgaaaccg
aaaagcaaaaaaatagatccaattaaaataggaccatcgactatattgtgggaacagcag
tttaaaatggatacagatataataccaaaagaaattaggctaaaatttctcaaagaattc
tgcggaattggtaatcataagcagttcaaagaccgaatgatggaagatcttgaccttgat
aaacctaagattctaaattttgaaaatcaagacataaagaatcaagcatatgcaatgatg
caaaacacatcttacttcatgtctaaacctagcaatttggttaaagtggggaatgtgtta
gaagaatttaaagacaaaattgttaatgctaatgaagaaacatgggcaacaatagaagag
attgctaaaaccaggtactggcagagtataaatgacttttctgttttaattaaaaacata
ctggctgtatctcaatacaacaagcataatacattcagaatagtatgcactgcaaacaat
aatttcttcggcttagtatatccttcaacaagtatacaatcgaaaagatcaactatagtc
ttctcaaccattgtactgcacgacaatgagtcagatgttttaaaatgtggggctttatac
aaaacatatagaataaagaatggctacttatcaatatctaaagcaattaggctggacaaa
gaacgctgccaaaggctagtgatatcccctgggttatttatgttaacctcattacttttt
aaaggagattgcgatgtgagtttaaatgatgtcatgaattttgcatttttcacctctctg
tcaataacaaaaagtatgttatcgctgacagaaccatctagatatatgattatgaattcg
ctagcactatctagccatgtaagagaatatatagctgaaaaattttcaccatacacaaag
acactttttgctgtgtatatgacagacctaatcaaacgagggtgtatggctgctaacgat
cagagacaacagatatcaataaaagatgtttttttgaatgagttcgaaatcactcaaaaa
ggagtgacaaatgacagaaacttacaatcaatatggtttccaggaaaagttaatctgaag
gaatacataaaccagatctatatgccattctatttcaatgctaaaggattacataataaa
catcatgtgatgattgatcttgctaaaacagtactagaaatagaattggatcaaagagta
aacctaccgacaccttggggcgttgatctaaaaaagcagtcagtcaacttagatgtctta
atattctctatagccaaaatgttaaatttagacacgtctaggcataaccatttaagaagc
agagttgaaaataggaataattttaaaaggtcgttagcaagcatctccacttttactagt
tcaaagtcatgtataaaagtaggagatttcaaggaattcaaagagagaaatgccttacat
atgaaaaaattacaagggaaagaggcaaaaaaaaccagaatagcaaatacagaatttgtc
tcagacaatgacagagatttggaaattgtccacagcacttacttagacctacggaaatct
gtaccaaattatacagattatatgtcaacaaaagtatttgataggttgtatgaaagattc
aagaatcatgattttgaagataaacctgcaatagaaataataatggacgtaatgagatgc
catactgatttcaaattttgcttctttaacaaagggcagaaaactgctaaagaccgagag
atatttgttggagaactagaggcaaagctgtgcctatatggtgttgagagaatagctaag
gaaagatgtaagttaaatccagatgaaatgatttctgaacctggcgacggtaaactaaaa
aagctggagataaacggagaatcggaaattagatatttaattgatgctactaggaatcaa
actagagaacaatcgaaagtagatgatctcttggacacaccaaagggaatcaaattagaa
ataaatgcagatatgtcgaaatggagtgctcaagatgttttctacaaatatttttggctt
atagcattggaccctatactgtatccgtttgaaaaacagaggatcatatttttcttttgc
aattacatgaataaagaactgatcctaccggatgagatgatgtgctcattattagatcag
aaagctcagcgcgaaaatgacctgattaggcaaatgacaaatggattcactacaaacact
gtcaatataagaagaaattggctccaaggtaacctgaactacacttctagttatatacat
agttgttctatgatggtcttcaaggatatcttgaaagaagtgtctgccttactagaagga
agatgtaatgtaaatagtatggttcattctgatgacaaccaaacctctgttataatggtc
caggataagttgcacaatgatataattacaaattttgtatgcaatacatttgaaagatgt
tgcttaacttttggcaaccaggccaatatgaagaaaacatatattacaaaccacataaaa
gaatttgtgagtcttttcaatatttatggcgaaccttactctgtgtatggccgtttctta
cttccggcagttggggattgcgcatatattggaccttatgaagatatggcaagcaggtta
tcagcaactcagacagcaatcaagcatgggtgccctccaagcttagcatgggtaagcatt
gcactgaatcactggattacattcaacacatataatatgttaccagggcaaatcaatgat
cctactaaagtattccatttcgaaagaagagaacttcctatcgaattatgtggtttattg
caggcagatctatcaactattgctttagtcggtttggagtcagggaatatctcatttctg
acatcgctattaaaaaggatgtctccgcctcaattggtgaaagaatcagttcaggcgcaa
tgtcaaaatattgaatcatgggatttaaactcgttatctgaaagtgagataatgaagtta
aagattttaaggtatgtagttcttgactcggaggtgagggaagacagtactatgggggag
actagtgatatgcgtagtagatctctaattacaccgcggaaatttacaaccccagcatct
ttagaacgacttgtttcttacaaagatttccaagagatattggctgacccaactagaaca
gaagatctactggaaactatgataaataaccctgaattattagtcacaaaaggagagaac
tctgaggaatttatgacgactatattatatagatataattcaaagaagtttaaagaatct
ttgtccatacagagtcctacccagttatttatagaacagatactgtttgcaaacaagcct
gttatagattatacaggtattcaagacagatacttaagtattctcgatgttccaagagtt
caggaaaatgagggaataataggaaggaaaacaattcccgaaacttttgttgctatcaag
agagatttatctttaatgaacttagatcataaagacataaagttagtatattctttttgt
attttgaatgatcctctaaatacaacagcatgcaatgccatattattgtcacaagttcaa
tcgcttatggatagatcaagtctatcagcagttacaatgcctgaatttagaaatatgaaa
ttaatacggtattcaccagccttagttctgcgagcttatatacacaataatttaaccatt
gctggagctaatgaaaatgcgatgagacgagatttatttcatttgcaagaatttatcaat
caaactaagataaaagaaaggctagataagagaatccaagacaacgaagagatcaaaggt
gaaagagataggatgtttgaaattaaagaaaccactaaattttaccaggcttgttatgat
tatattaaatctactgagcatagagtgaaagtctttattttgcccatgaaagcatataca
gcatttgatttctgtgccacaatacatggcaatcttatgaaagataaagggtggtttgct
gtccattatctaaaacaaatagtttctgggactgctaaagcaagtgtcagtcaagctcct
gcaagtgaaatgattatcgtgggtgaatgtttcagattgatagcacacttctgcgacaca
tttattgatgttggatctagactacaattcttatacaatataatagataatttcacatat
aaaaatatacctgtgaaaaatttactagagatcatgatgagaactaataaaaggcaacac
ttcttgccaatacttcattggttagaagagctaacacaacatgatatagacaaatatgat
gcctataaggcaaatgaaagggttgtatggaatgattggcaagttaatagagatatgaat
actgggaacattgacttaacaattaagggttaccagcgcacattgagagtaattggtgaa
gatgatactctaaaaataggggaattagaaattttaaaaggagatacaaccccaatagaa
actcacgggaggaagttactcaactcaaagcatggtttgaagttcgagaaaatgcagaga
tataaaattatagagcctaatacgtactatatctgctggcagaacagaactagattctct
tacacttatcaacttttgctatcgaatataatagaagcacgtaattctcaaactgtatct
gttacaggtggtaagtttaatgaattagttccagtatgcccagtgatagtaagtagaatt
gactctgatgataaaatgaatttaaggcaaattaagtatcttaatatggactgctcatta
actcgacttcagctaaatcagaatgagtttgctgtagtcaaaagatgtcatttttctaaa
atggtattcttcaatggaccagaaatggtagtcggcaatataaatataacaaatttgatt
caaactccaagtttgttaacaacgaactacccatcattatctcaaatgccaatgatgaca
ttgacaagaatatttaactgcaatggtgaagaaaaagaagtagacgaatttgaattttta
tcggatgaaatactagaagaaacagagactgcagtgataaatgcacagccaatgttcaat
attcaatatgaaacaaaatcaaagaaaggctatacatataaaagagctttgcaagaagcc
ttatctagagggatacaagaaattgagcataatttcgacttctgcaaagatggattttat
tcaccaaaaaatatcgcgataatagcattgctagttaatgttatagatagattgcataca
aacgaatggtcaagcatcatacggaaatcttttcatatgtgttttttcaacaatgggaaa
gataaattgtttcatatgatgaatatacctaaaacatttatcaaaaacccgataggggaa
gtcccaaattgggagaagataagaacattcataatccaattagaaacggcttatcctggc
aataattggcatcagatgtttgagcatttcaaggagaaatgcatattattgatagataga
gaaattaaaatggagggcatgagctggggtgaaatgttagatgaacttgatgattataaa
gacactgaaatgtttcatttcaattag

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