Viruses: 37627239 Help Entry 37627239          CDS       T40000                                  Symbol L, D1Y46_gp9 Name (RefSeq) avian metapneumovirus; L   KO K26133   Pneumoviridae RNA-directed RNA polymerase L [EC:2.7.7.48 3.6.1.- 2.7.7.88 2.1.1.375] Virus 38525  avian metapneumovirus Taxonomy SSDB OrthologParalogGFITVogVog cluster Motif Pfam:  Mononeg_RNA_pol Methyltrans_Mon_2nd Mononeg_mRNAcap HOOK_N Motif Other DBs NCBI-GeneID:  37627239 NCBI-ProteinID:  YP_009513228 RS:  NC_039231 LinkDB All DBs Position NC_039231:7244..13258 Genome browser AA seq 2004 aa AA seqDB search MEISDESVVNVYLPDSYLKGVISFSETNAIGSCVLNRPYIKDDYTAHVAMTNPVIEHQRL RALFKSLTISREYRVVEPLMIQKELLKVAAGARLKKLKKWLGRSKDISEVKLKMVTDWLK LSQTPGRGKIIDRIQVENLPDWLEHWFDSWLILNDVIQSYRCLEVSQTSAILRKSSLNFF FAVSSFGCIIISRKSRRICFCTYNQLLTWKDLALSRFNANLCVWVSNCLNSAQDGLGLRS KLVGELLNRLYCETDELLSITGNEGYGIVKEFEGFIMSEILRMTEHAQFSVRFRNTLLNG IADKIGKMRAAYRRRTQNTSVEHHRYPGEHEMLEATGRVLRIIKLLVNNEIANAAEMYFI FRIFGHPMVEEREAMDAVRDNSETAKILSLVALTEMRGAFILRVIKGFVGNYKRWPKIKN PSTLSRRWKMYMNAKTYPSNLELCVEDFLELAGISFCQEFYVPSQTSLEMVLNDKAISPP KSLIWSVYPRNYLPQNIQDRFRLESLDRLEHERTRRVLEFYLKDANFKQSDLKKYVVGQE YLNDKEHVVSLTGKERELSVGRMFAMQPGKQRQVQILAEKLLSDNIVPFFPETLTRYGDL ELQRIMELKSELSSTKKRKSDSYNNYIARASIVTDLSKFNQAFRYETTSVCADVADELHG TQSLFCWLHLTVSSTTMICTYRHAPPDTGGIYDIDQIPEQSGLYRFHMGGIEGWCQKMWT MEAISLLDVVSVRNRVQLTSLLNGDNQSIDVSKPVRLTGAQTEIQADYSLAIKMLTAVRD AYYNIGHKLKEGETYVSRDLQFMSKTIQSEGVMYPAAIKKVLRVGPWINTILDDIKTSME AIGSLCQELEFRGESFVTSLIVRNFWLYIQCFVEAKDHSLAGAQISNELNRTLTKVKRFF RLADESSTVNLFMNIPMQLGGGDPVVVYRSFYRRTPDFLTEVLTHMELLLTAIEMDRGVY MNFFLTLLNTCKNDRATLTTLMRDPQAIGSERQAKVTSEINRTAVTSVLSLAPNPLFSDS AVHFSQNEEEIGTVMEDISPVYPHGLRVVYEAFPFHKAEKVVNMIAGTKSITNILQRTSA ISGVDIDRAVHMMLLNLGLLGRILESGPITDTIDLRSNNRILCCQLSKRIREMSWDGLEI VGVSSPSMLSSLDINYVTIAQKPGIIVEKFSAEKTTRGKRGPKAPWVGSSTQEKKLVAVY NRQALSKEQKDQLETIGKIRWVYKGVTGLRRLLNLICLGTLGLPYKLLKPLLPRFMSVNF LHRLAVSSRPMEFPSSVPAYRTTNFHFDTSPINKRLSERFGNEDINLVFQNAISCGISVM CVVEQLTGRSPKQVLLEPIVEDIDIMSAPNFQGHLNFKSVRKIVTDQHIFNPDHIDLVML GKLLLPTVRSNINNNKPATENFFNGNNIVEALTSCLACHWCTVLILLTTENSIFQKEWGD GFITDHAFINFTWFLMSFKTYLLCHWQTEKNKTLGIVEDPIDRLIRVDNSFWRMMSKVFL EPKVKRRLMLYDTSVLNVLGSISFKNWFVSRLRTVDYMEIPWIVNAEGDIVEQKPVTEYL KIMAAGVHVKVIMLSYSDMAHAMTRLLRCKNMQDNVPTIKKTVSPTDVTPSVDPTRALLL FPKVIFSKLTTFNATCSTAKQSGSNLTKNYMTLMPWHHINRYNFVHSSTGCKVSVKGCIG KLITKLELRIIYFIGEGAGNLMSRTACEYPNLKFVYRSLKDANDHHHPTEYVRVMGSISR IIDLGEGLAMEATDATKREHWDFIHRVCKDPLLLTICDAELKNMEDVLHLVIQWRKHVLS CNICTSYGTNVYMFVKYHAQSEAKKLPHFVRVVSIYIMQGSKLSGSECYMLLTLGHQNMA PCYGEVRSAKSIMALTSTFKHPCRLDKSAIEANLKSLAPGLTLPLSEPAMQKYLLDLSSL SGIKNTGATIGGSKVVEKKWALCKVSNIVKWLSHVLKMPKGDLNYDFFEVIENTYPDMVK LLDNLNPSELKKLVKVTGYILGTK NT seq 6015 nt NT seq  +upstreamnt  +downstreamnt atggaaatatccgatgagtccgtcgtaaatgtctatctgcctgactcttacttaaagggg gtcatttcattcagtgagaccaatgcaattggatcatgtgtactcaaccggccatacatt aaggatgactatacagcacatgttgcaatgactaatccagtgattgaacaccagaggttg agggccctcttcaagagtcttaccattagcagagaatatcgagtggtcgaacctcttatg atccagaaggagctgctaaaagttgcagcaggtgcaagactaaagaaactcaagaaatgg ttgggtagaagcaaggatataagtgaagtcaaattgaaaatggtgactgattggcttaaa ctgtcacagacaccaggaaggggaaaaataatagatcgtattcaagtggagaacttacct gactggctggagcactggtttgattcttggttgatattgaatgacgtcatccagtcttat aggtgtttggaagtatcccaaaccagtgctatattacggaaaagtagcctgaacttcttt tttgctgtttcttctttcgggtgtataatcataagtcgcaagagtagaagaatatgtttt tgtacctacaatcaactcctgacttggaaggaccttgccttgagcagatttaatgcaaac ttgtgtgtgtgggtgagcaattgcttaaatagtgcccaagacggccttggattaaggagc aaattagttggtgagttactcaaccgattgtactgtgagactgatgagttattgagcatc actggcaatgaggggtatgggattgtaaaggaatttgaaggattcattatgagcgaaata ttgcggatgactgaacatgcacaattcagtgtaaggttccggaatacgctattgaatggc atagctgataaaatagggaagatgagagctgcataccgaaggcggacacagaacacatct gttgagcatcatagatacccaggcgagcatgaaatgctggaagcaacagggagagtgctg agaataattaagcttctggtgaataatgagattgctaatgctgcagagatgtattttata ttccgcatattcggacatcctatggtagaagaaagggaggctatggatgcagtgagggat aacagtgaaactgcaaaaatcttaagtctggtggcccttacggagatgaggggggccttc attctgagagtgatcaaaggtttcgtagggaactacaaaagatggccaaagataaagaat ccatcaacattgagtcgaaggtggaagatgtacatgaatgcaaaaacatacccaagcaat cttgaattgtgtgtggaagacttcttggagctcgctgggatcagtttttgccaagaattc tatgtacctagccagaccagtttggagatggtactgaatgataaagcaatatctcctccc aaatctctcatatggtccgtgtatccacgtaactaccttccgcaaaacatacaagacaga ttcaggttggagtctcttgacagactagagcatgagcgcaccaggagggtgctagagttc tacttaaaagatgctaattttaagcaaagtgatctcaaaaaatatgttgtaggtcaagag tacttgaatgacaaagagcatgtggtctccttaacaggaaaagaaagggaactaagtgta ggtcgtatgtttgcaatgcaacctggaaagcaaagacaggtgcagatccttgctgagaaa ttgttatcagataacatagtgccatttttcccagagacattgactaggtatggagatcta gaattacaaagaatcatggaactcaagtccgaactatcgtctacaaaaaaacggaaaagt gatagctacaataattatatagcaagagcttcaatagtgactgatttgagcaagtttaac caagcctttagatacgagactacttcagtgtgtgctgatgttgcagacgaactgcatggg actcaaagccttttctgctggttacatctgactgtatcctccacaaccatgatctgcact tatagacatgctccccctgacacaggtggaatctacgacatagaccagataccggagcaa agtggactgtataggttccacatgggtggcatagaaggctggtgccaaaagatgtggacc atggaagcaatatcactccttgatgtggtgtctgtgaggaatcgggtgcagctcacatca ctgctgaatggggacaaccagtctatagatgtgagtaaacctgtgcgactcacaggtgct caaactgaaatacaggctgattatagccttgccatcaagatgttaactgctgtaagggat gcctactataacataggacacaagttgaaggaaggggagacttatgtttcaagagacctc cagtttatgagcaagaccattcaatcagaaggcgtaatgtatcctgctgcaattaagaag gttctgcgagtgggtccctggataaacacaatactggatgacatcaagactagtatggaa gctattggaagtctctgtcaagagttagaatttcgaggggagtcatttgtgactagtctt atagttcggaatttctggttgtacatccagtgctttgtcgaggcaaaagatcatagctta gcaggtgcacaaatatccaatgagcttaatagaactttaaccaaagttaagagattcttc aggttagcagatgagagcagcactgttaacttgttcatgaacataccaatgcagttgggg ggaggggaccctgttgttgtttataggagtttttatagacggacaccagattttttgaca gaggtgttaacacacatggagttactactaacagcaatagagatggatagaggagtttat atgaacttcttcttaacactgttgaacacatgcaaaaatgatagagccactcttaccaca ctgatgagagaccctcaagctattgggtcagaaaggcaggctaaggtaacaagcgaaatt aatagaacagcagtaactagtgtgctcagccttgcaccaaaccccttgttcagtgatagt gctgtgcatttcagtcagaatgaggaagaaataggcacagttatggaggatatatcacct gtctacccacatggactgagagtggtgtatgaagcattcccattccacaaagctgaaaaa gttgtaaacatgattgccggaaccaaatccataacaaatatcctccaaagaacttctgct ataagtggtgtagatattgacagagcagtccacatgatgttgctcaacttgggcctgttg ggtagaatacttgagtctggacctatcactgacacaatagatctgaggagcaacaatcgg attctttgttgtcagctttccaaaagaataagagaaatgtcatgggatgggttggagatt gtcggtgtatcatctccaagcatgttgtctagcttagatattaattatgttacaatagca cagaagccaggtatcattgtagaaaaattctcagctgaaaaaacaacaagagggaaaaga ggtccgaaagcaccatgggtaggttcaagcacacaagagaaaaaattggtagctgtttac aacagacaggccttatcgaaagaacaaaaagaccaattagaaaccataggcaaaatcagg tgggtctacaaaggcgttactggcctccgacgtcttctaaacttaatatgcttaggaaca ctgggtcttccatataagctgttaaaaccacttctacctcggtttatgagcgtcaatttc ctacacaggcttgcagtgagcagcaggcctatggagttcccatcatcagtaccggcgtat agaactacaaactttcattttgacactagtcctataaacaagcggttgagtgagagattt ggcaatgaggacattaaccttgtgttccaaaatgctataagttgtggaattagtgtcatg tgtgtggttgaacaattgactgggcgtagccctaaacaagtgttactagaacctatcgta gaagatattgacataatgtccgcccctaatttccagggccacctgaatttcaagagtgta agaaagattgtgactgatcaacatatctttaatccggaccacatcgacttggttatgctt gggaagttgttattaccaactgtccgtagcaatataaataacaacaaaccagcaactgaa aacttctttaatggtaacaacatagtagaggcactaacaagctgtcttgcttgccactgg tgcactgttttgattctactcactactgagaatagtattttccagaaagagtggggagat ggattcataacagaccatgccttcataaacttcacatggttccttatgagcttcaaaact tatctcctatgccattggcaaactgaaaagaacaagacattggggatagtagaggatccc atagacaggcttatcagagtagacaatagcttttggcggatgatgagcaaggtgttcctg gaacccaaagtaaaaagaagacttatgctttacgatacatctgtattgaatgttctgggt agtatcagtttcaaaaactggtttgttagccggttaagaacagtagactacatggagatc ccatggattgtcaatgctgagggtgacatagtcgagcaaaaacctgtcactgaatatttg aaaataatggctgcaggtgtccatgtaaaagtcataatgcttagttactccgatatggca catgctatgacacgcttgctaaggtgcaagaacatgcaagacaatgtgcccaccataaag aaaacagtatctccaactgatgtcacaccctctgtagaccccactcgggccctactgctg ttcccgaaagtcatctttagtaagttgaccactttcaatgcaacatgcagtacagctaag cagtctggcagcaatttgacaaaaaactacatgactttaatgccttggcaccacatcaac cgttataactttgtccatagctccacagggtgtaaggtaagtgtaaagggatgtataggc aagttgataacaaaacttgaactaagaattatctacttcatcggtgagggagctgggaat cttatgtccagaactgcatgtgaataccctaatctaaagtttgtatacaggagtctgaaa gatgccaatgatcatcatcatcccacagagtatgtgcgtgtaatggggagtatcagcaga ataatcgaccttggtgaagggttggcaatggaagcaactgatgcaactaagagagaacat tgggattttatccacagagtgtgcaaagatcctcttctgctaaccatctgtgatgctgaa ctaaaaaacatggaggacgtcctgcatttagtgatacagtggaggaaacatgtactatct tgtaacatatgcacatcatatgggactaatgtgtacatgtttgttaagtatcatgcacaa tctgaagcaaagaagctaccacattttgtccgagtagtttcaatatatatcatgcaaggg agtaaactatcaggatcggaatgttatatgttgttaacattaggtcaccagaacatggca ccttgctacggagaggttaggtctgcgaaatcaatcatggctttgacaagtacttttaaa cacccctgtagactagacaaatctgccatcgaggccaacctgaaatcactagcacctggg ttgacactgccacttagtgagcctgctatgcaaaagtacttgttggatctttcaagctta agtggaattaagaacacgggggcaaccattgggggaagcaaagtggtagagaagaagtgg gctttgtgcaaagtgtcaaatatagtgaagtggttaagtcacgttctgaaaatgcccaaa ggtgatttaaattacgattttttcgaggtgatagaaaacacatacccagacatggtgaag ctattggacaacttaaacccgtcggagttgaaaaagctcgtcaaagtcaccgggtacatc ctgggcacaaagtaa

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