Viruses: 41324329
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Entry
41324329 CDS
T40000
Symbol
FLA88_sMgp1
Name
(RefSeq) Jamestown Canyon virus; M polyprotein
KO
K24572
Orthobunyavirus envelopment polyprotein
Virus
35511
Jamestown Canyon virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
Bunya_G1
Bunya_G2
ACR_tran
Motif
Other DBs
NCBI-GeneID:
41324329
NCBI-ProteinID:
YP_009666885
RS:
NC_043560
LinkDB
All DBs
Position
NC_043560:53..4387
Genome browser
AA seq
1444 aa
AA seq
DB search
MEVLNLIWLLALCSASPVFQRCFQDGAIVKQNPSKEAVTEVCLKDDVSMIKTEAKYVKNT
TGTFANNIAMRKWLVADWHDCRPQKSSGGHINVIEVGDDLSLHTESYICSADCVITVDKE
TAQIRLQTDNTNHFEVAGTTVKSGWFKSTTYITLDQTCEHLKVSCGPKSIQFHACFNQHM
SCVRFLHRTILPGSIANSICQNIEIIILVTLSLVIFIFLSIVSKTYVCYLLMPIFIPIAF
IYGWVYNKSCKKCKLCGLVYHPFTECGTHCVCGARYETSDRMKLHRASGLCPGYKSLRAA
RVMCKSKGPASILSIMTAILILTFVTPISAMVIGESSEVYTLDDLPNDMVQMAERVNIYY
QIIIINYGVTWAFLLLGLILAYFFKKYQHKFLDFYAMYCEECDMYHEKSGLTHWGDFTNK
CRQCTCGQFEDVAGLMIHKKSYNCLVKYKAKWIRDILIIYLAMILIKDSLLFVGASGTDF
AACIDEKVVTWNCTGPFLNLGRCDKSQKKASYAGIADQLKGLGVISVLDIPMIKNMPDEI
SGSLKYIDSLETYHEQLTAEYAFLTRYCDYYTQYTDNSGYSQTVWRTYLRSHDFGACVVY
PNQHFCRCVKYGDKCNSAKWDFANEMKTFYTGQKVKFNKDLNLALLVLHKAFRGTGTAYV
AEAMARKDNGSMAHFALEIRKKFPTNALLAALIDYIVYLQSLGEIATFELDEDWEDFKYK
PEPTESTPQVRSHRNDQYNFKNAESNSDTKVCKNVQKVLCISPRSKAKFENIIACGEHAN
PSVYMMPNVSIYQSNSERSHYCIADSHCLEKYEVVETELLNALKKSKCWAKEMDDIILHK
QSDGLRSCRIKDTGNCNVQENDWTIVLCENGNYYYSEVHKDYDKDQDVGHFCLSPRCTTI
RYPISKRHIKKCEWQISHSTIDKISVQELADIEQYKKAISQKLQTSLSIFKYVRTKNLPH
IKPAYKYITVEGVETIEGIENAFIESEIPALAGTAIGFKINSREGNYLMDVIGYVKSASY
SAVYTKLYTTGPTIGINTKHDEKCTGPCPAIIDHKDGWLTFSKERTSTWGCEEFGCLAVS
DGCVFGSCQDIIKDELAVYRKTTEELTTVELCLTFSDKTYCTNLNAITPIITDKFEVQFK
TVESYTLPRVIAIKNHEIKVGQINDLGVYSKGCGNVQKVNGTNYGNGSPRFDYLCHLASR
KEVILRKCFDNDYQACKFLQSPSSYRLEEHQGTVTVIDYKKILGTIKMKAILGDVKYKNY
QNNIEINAEGTCAGCIDCFENIHCEFTIHTTVEASCPITTECVSFHDRILITPDEHKYAL
KIVCHDKPKVSLKFKICNTNVDAAMTIVDSKPILELAPVDQTTYIREKDERCKTWMCRVR
DEGFQVILEPFKNLFGSYIGIFYTGILSIICLLIVVYIILPICFKLRDTLRQHEDAYKKE
MKIR
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcctaaacttaatctggttactagcattgtgctcagctagtccagtatttcaa
cggtgtttccaagatggagctatagtgaagcaaaacccatctaaggaagcagtgacagag
gtgtgcttaaaggatgacgtgagcatgataaaaacagaagcaaaatatgtaaaaaatacc
acagggacatttgctaataacatagctatgagaaaatggttggttgcagattggcatgac
tgtaggccccaaaagtcatcaggtggtcatattaacgttattgaagttggagatgatctg
tcgctccacacagagtcttatatttgcagtgcagattgtgttatcacagttgataaagaa
actgctcagatccgcttgcaaactgacaatacaaaccactttgaggttgctgggaccaca
gtaaaatcaggttggttcaaaagtacaacttatatcacacttgatcaaacatgtgagcat
cttaaagtatcatgcggaccaaaatcgatacagtttcatgcttgcttcaatcagcatatg
tcttgtgtgcgattcttacatagaacgatactaccagggtcaattgctaattccatatgt
caaaatatagaaataattatcttggttactctctcattagtaatcttcatattcttatca
atagtaagcaagacatatgtatgttacttattaatgcctatcttcatcccaatagctttt
atctatggatgggtatacaataaatcctgcaagaaatgcaagttatgtggcttagtttat
cacccattcacagaatgtggaacacactgtgtatgtggtgcaagatatgaaacttctgat
aggatgaaattgcatagagcatctggattgtgtccagggtacaagagtctcagagcagct
agagttatgtgcaaatcaaaaggaccagcttctatcctatctataatgactgcaattctc
atactaacatttgtcacccctattagtgccatggtcataggtgaatcaagtgaggtgtac
acactagatgatttacccaatgatatggtacaaatggcggagagggtgaatatctattat
caaataatcatcattaattatggtgtcacttgggctttcttattgcttggtttaattttg
gcatacttcttcaaaaaatatcaacataaatttctagatttttatgcaatgtattgtgag
gaatgcgatatgtatcatgagaaatctggtttgacacactggggtgactttactaataaa
tgtagacagtgcacatgcggtcagtttgaagatgttgctggcttgatgatacataaaaaa
tcttacaattgtttggtcaaatataaagcgaaatggataagagacatactcatcatatat
ttggctatgattctgatcaaagattcgttattattcgttggagcatcggggacagacttt
gctgcatgtatagatgagaaagtcgttacatggaactgcactgggccattcctaaattta
ggtagatgcgacaaatctcagaagaaagcaagctatgcaggtatagctgatcagttaaag
ggcttaggagttatatctgttttggatatcccgatgataaaaaatatgccagatgaaata
tcaggttcactaaagtatatcgacagcttagagacgtatcatgagcagctaactgctgaa
tatgctttcctcaccaggtactgcgactattatacacaatacacagataactctggctat
agtcaaacagtatggaggacttatttacgatctcatgattttggtgcatgtgtcgtttat
ccgaatcaacatttttgtagatgcgtaaagtatggagataaatgcaatagtgccaagtgg
gattttgccaatgagatgaaaacattctacacaggccagaaagtgaagtttaataaggat
ttaaacttggcattattggtattacataaagcatttagaggcactggaactgcatatgtt
gcagaagctatggctcggaaagataacggttccatggcacattttgctttggagataaga
aaaaaattcccaacaaatgctttgttagcagcattaatagattatatagtttatttacag
tcccttggagaaatagccacatttgaactcgatgaagattgggaagattttaaatataag
ccagagccaacagaatcaacacctcaagttaggtcacacagaaatgatcagtataacttc
aaaaatgctgaaagtaatagtgataccaaagtctgtaagaatgttcagaaagtactatgt
atttcacccaggtcaaaggcaaaattcgaaaatattatagcatgtggagagcatgcaaat
ccatctgtatacatgatgccaaatgtcagcatctaccaatccaattcggaaaggagtcac
tattgtatagctgactctcattgccttgagaaatatgaagtggtagaaacagaacttttg
aatgctttaaagaagtcaaaatgttgggccaaggaaatggatgatattatcttgcataag
cagagcgatggcttgaggagttgtagaataaaagatactggaaactgcaatgttcaagaa
aatgattggaccattgtcttatgcgaaaatggcaactattactactctgaggtccacaaa
gactatgataaagatcaggatgtaggtcatttctgtctcagccctagatgcactacaata
cgttatccaataagtaaaaggcatataaagaagtgcgaatggcagatatcacattcaaca
attgataaaatctctgttcaagagttagcagacatagaacaatataagaaggccatatca
caaaaactgcaaacaagtctatcaatttttaagtatgtaagaacaaaaaacctcccacat
atcaaacccgcatataagtacataactgtagaaggtgtcgaaactattgaaggaatcgaa
aacgcttttatagagtctgagatcccagcattggcaggtacagctataggtttcaaaata
aattcaagagaaggcaactatctaatggatgtgatagggtatgttaagagcgcatcatat
tcagcagtgtacacaaaactatatacaactgggcctactataggaataaacaccaaacat
gatgaaaaatgcacaggaccttgcccagctataatagatcataaagatggttggctaacc
ttctcaaaagaaaggaccagcacttggggttgtgaagagtttggttgcttagcagtcagt
gatggttgtgtatttggctcttgccaagatataataaaagatgaattggctgtttatagg
aaaactactgaagaactcactacagtagaactgtgcttgacattttcagataaaacatat
tgcaccaacttgaatgctataactcctattataacagataaatttgaagtgcagttcaaa
actgttgaatcttatacactaccaagagtcattgccataaagaatcatgagattaaggtt
ggacaaatcaatgacttaggtgtctactcaaaaggatgtggaaatgttcaaaaggtcaat
ggaacaaactatggcaatggttcaccaaggtttgattatctttgccacttggcgagtaga
aaagaagtaatcctaaggaaatgttttgacaatgattaccaggcttgcaaattcttgcag
agtccttcaagttatcgtttagaagagcaccagggaacagtgacagttatagattataaa
aagattctaggcactataaagatgaaggctatattaggggatgtgaaatacaaaaattat
caaaataatatagaaatcaatgctgagggaacatgtgctggatgtattgattgctttgaa
aatatacactgtgaatttactatacatactacagttgaagcaagttgtcctataacaaca
gagtgtgtctccttccatgatagaatattgatcacaccagatgaacataagtatgcattg
aagattgtatgtcatgataaaccaaaagtgtctcttaaatttaaaatctgtaacacaaat
gttgatgcagctatgactattgtagattctaaaccaattttagaacttgcgccagtagat
caaacaacatacatcagagagaaagatgaaagatgcaagacctggatgtgtagagtccga
gatgaagggttccaggtgatattagaaccttttaaaaacctctttggttcgtatattgga
atattttatactggtatattgtctattatttgtttactcattgtcgtctatattatattg
cccatttgtttcaaattgagggacaccttaaggcagcatgaagatgcctataaaaaggaa
atgaagataagatga
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