Viruses: 41701060
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Entry
41701060 CDS
T40000
Symbol
EXJ65_gp084
Name
(RefSeq) Cherax quadricarinatus iridovirus; 083L
KO
K26369
Iridoviridae putative DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Virus
2035708
Cherax quadricarinatus iridovirus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
DZR_2
RasGAP_C
Motif
Other DBs
NCBI-GeneID:
41701060
NCBI-ProteinID:
YP_009552364
RS:
NC_040612
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All DBs
Position
NC_040612:complement(75457..78936)
Genome browser
AA seq
1159 aa
AA seq
DB search
MRITTRFTTTNLTLMTVMNLNRKLQKNTYPFGDMYFLLKYLKWAYYRKYNKINTMEAKSG
STLIKEYYEKTNFVNHQIDSYNDFVSRGIQTIAQRENPIMAGKFKIEINNIYVDKPIFTK
KVKEGEADESEDVGMNDCTEITDDAQPISEGQKISYQICPLYPNDARKRNMNYDGTIYVS
FKVTNTQTDKSVEHNQISIGKLPIMLRSNLCRLSEGNKTDHEECANDFGGYFIIKGKERV
LVAQVMRANNKPFVTQIEEKEKYDYLCEVRSTNEIGGSILIQLKILKRTHELFFSLPYIK
IKAMLPAGLVFKAIGTSQEDMLKMCRVTVRDVNDTLIRQYNMVDTVEGAIEYIANNINDT
NKNKDYVIDILTKELFFHLGALTPEKSAAYLGFMIKKIVDTAYLYRAVDDKDNLSNKRVD
GTSSLLTFLFQIVFKQFIKTIVNQIESKKNPDPITIIKNVKNITHVLNQAFMTGNWNTQR
STLFTREGVSQVLSMQNYGAKISHLRRMAIPSNKNGKILSARKLHASQFSFICPYETPEG
EKVGLVTNLALSATISTHTCPIAVTEVVKTFKGFQDDYFGKNLVFVNGNIIGSCMHMMKF
VKEFNEYRLSDLIDNSVSIIKISDENEIHIQTDEGRLLRPLFALGPRNEILYKQDPGKSW
DEYVKTGKIVFRDVWELEQSIVAMSKDDLKKNRCDYLEICPAATMMSVMASVIPLSNHSQ
SPRNAYQSSMGKQAVGVPSIAYQERFDTTLQVLNTPQQPITKSNMVNVLKFNEMCHGANP
VVAIMTFSGFNQEDSIILNKGSLDRGLFMSTTYKTIMEEERKKGTSESENICLPPVQYRN
KNHNYSFLNKHGIVWQKSTYLKKGTVIIGKVTKKKIKGTNEYTVTDSSVVIKHGEEGYLD
KVFITLNEGIRIIKIRIRVPRIPEIGDKFASSTAQKGTCGMIYAQEDMPFDKDGISPDLI
INPHAIPSRMTINMLIEMCFNLIGCKLGKRMDATPFEHRNIEQELLDWAEKAGIETYLST
MKDGRTGEVFPSKIFMAPCFYQRLKHMVGDKIHSRITGPLDSMTHQPVAGRAKDGGLRIG
EMEKDCILSHGSTRLLKECMFDKSDKYFVPVCNLCGEISNKRDFCVNCQEDSVEMKVMPY
ATKLLVQELMGMGMNLIFK
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgaggattacgacgaggtttacgacgacgaatctgacactgatgacggttatgaatctg
aatagaaaattacaaaaaaatacatatcccttcggggatatgtattttttattgaaatat
ttgaaatgggcatattaccgaaaatacaacaaaataaacactatggaagccaaatcagga
tccaccctaattaaagaatattatgaaaagacaaactttgtcaatcatcaaatagattcc
tacaatgatttcgtttcacgtggcattcaaacgattgctcaacgtgaaaacccaatcatg
gctgggaaattcaaaatagaaatcaacaacatttacgttgataaacccatctttaccaaa
aaggtaaaagagggagaagctgatgaatctgaagatgttggaatgaacgattgtaccgaa
attacggatgacgctcaaccaatttcagaaggacaaaagattagctatcaaatttgtcca
ttgtatccaaatgatgcgagaaagagaaacatgaactacgacggaacgatttacgtttca
tttaaggttacaaatacccaaactgataaatctgtagaacataaccaaatttcaattgga
aagttaccaatcatgcttagatcaaatttgtgtagattgtcagaggggaacaaaacggat
cacgaggaatgtgcaaatgatttcggaggatatttcatcataaagggaaaggagcgcgtt
ctagttgctcaggtcatgagagcgaataacaaaccgttcgtaacccagattgaagaaaag
gaaaagtacgattacctttgcgaagttagaagtacaaacgaaattgggggttctattctg
attcaattgaaaattttgaaacgtacacacgagcttttcttttcactcccatatattaaa
attaaagccatgttgccagccggattggttttcaaagcgatcggtacgagtcaggaagac
atgttaaaaatgtgccgagttacagttcgtgacgtaaatgatactctgattagacagtac
aatatggttgataccgttgaaggcgccattgaatatatcgcgaataacattaacgacaca
aacaagaacaaggactatgtaatcgatattttgacaaaggaattatttttccatttggga
gcactcacacccgaaaagtctgccgcgtatttgggattcatgattaagaagattgttgat
acggcatacttgtatagggcggttgatgacaaagacaatctgtcaaacaaaagggttgat
ggaacatcttcgttactcacatttctgtttcaaattgtattcaagcaatttatcaaaacg
atcgtaaatcaaatcgaaagcaagaaaaacccagatccaatcacaatcataaaaaatgta
aaaaatatcactcatgttctaaatcaggcattcatgacaggaaactggaatacacaaagg
agtaccctgtttacacgagaaggcgtttctcaggttttgtccatgcaaaactatggagcc
aagatatcccatttgagaaggatggccattccttcaaacaagaatggaaagatcctatca
gccagaaagttgcacgcctctcaattttctttcatttgcccatatgaaaccccagaagga
gaaaaggttggattggttacaaatttggcattgtctgctacaatttccactcacacatgc
cccatcgcagtaacagaagttgtgaaaacattcaaaggatttcaggatgactattttgga
aaaaatcttgtatttgtcaatggaaatatcattggatcgtgtatgcacatgatgaagttt
gtaaaggaatttaatgaatacagattgtctgatttgattgacaattccgtgtccattata
aaaatttctgatgagaatgaaattcatattcagactgacgagggaagattgttgagaccc
ctgtttgctcttggaccgcgcaatgaaattttgtacaaacaggatccaggaaaatcttgg
gacgaatatgtgaaaactggcaaaattgttttcagagatgtttgggaattggaacagtct
atcgtggcaatgtcaaaagacgatttgaagaaaaacagatgtgactatctggaaatttgt
cccgcagcaacgatgatgtctgttatggcgtctgttattccactatctaatcattcacaa
tccccaagaaacgcataccagtcctcaatgggaaaacaagctgtcggagtcccaagcata
gcgtatcaggaaagatttgatacaacccttcaggttttgaatacgcctcaacaacccatt
acgaaaagcaacatggttaacgttctcaaatttaacgaaatgtgtcacggagccaatccc
gtcgtagccatcatgacatttagcggtttcaatcaggaagacagcatcatattaaacaag
ggttcgttggatagaggcctgtttatgtctacaacctacaaaacaatcatggaagaagaa
cgtaaaaaaggtacatcggaatctgaaaatatatgtctacccccagttcaatatcgaaac
aaaaatcacaactactcatttctaaacaagcatggaatcgtatggcaaaagagtacatat
ctgaaaaagggtacagtcatcattggaaaggttacaaagaagaaaatcaagggaacaaac
gaatatacagttacagattcaagcgttgtaatcaagcatggggaagaaggttatttggac
aaggttttcataacactgaatgaaggaattcgcatcatcaagattaggatccgagtgcca
cgtataccagaaattggagataaatttgcatcatcaacagcccaaaagggaacgtgtgga
atgatttacgcccaagaagatatgccatttgacaaagatggcatttcccccgatctcatc
ataaatccacacgcaattccatcacgtatgacgataaacatgttgattgaaatgtgtttt
aatctaattggttgcaagttgggaaaaaggatggatgcaacaccatttgaacatagaaat
atcgaacaagagcttttagattgggcggaaaaggcgggaattgaaacctatctttctaca
atgaaggatggaagaacaggagaggtattcccttcaaaaatatttatggccccatgcttt
tatcagagattgaaacatatggtgggtgataaaattcactcgagaataacgggaccatta
gacagcatgactcatcaacccgtggcaggaagagcaaaggatggaggattgcgtataggt
gagatggaaaaagattgcatcctcagtcatggatccacccgtctattaaaagagtgcatg
tttgacaaaagtgacaaatattttgtaccagtatgtaatttgtgcggagagatatcaaac
aaacgagatttttgcgtaaactgtcaagaggatagtgtggaaatgaaggttatgccatat
gcaaccaaactactcgttcaggagctaatgggaatgggtatgaaccttatattcaagtaa
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