Viruses: 41854837
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Entry
41854837 CDS
T40000
Symbol
ORF1, F7P57_gp1
Name
(RefSeq) Norovirus GI; nonstructural polyprotein
Virus
122928
Norovirus GI
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
Peptidase_C37
Calici_PP_N
RdRP_1
RNA_helicase
Zeta_toxin
nSTAND3
VPg
AAA_33
Nepo_coat_C
AAA_18
NLPC_P60
RuvB_N
AAA
Rad17
AAA_5
AAA_22
Com_YlbF
LRAT
Motif
Other DBs
NCBI-GeneID:
41854837
NCBI-ProteinID:
YP_009700093
RS:
NC_044853
LinkDB
All DBs
Position
NC_044853:1..5358
Genome browser
AA seq
1785 aa
AA seq
DB search
MMASKDVVAATAASASNASDNSTTIKDRLMAKLKNIGTNNKPIKIENTHMALGLIRGSSP
TPLKESPKQQRERAPRSVAETQQAMGWVEQPVDQNLPTWEELSESEKRDILAKNERWFDA
GGLGPATLPDSYERTSQSDSHEHQVRWDANTGVDLGIRGLTSVDGPAWNMCPMPPMDQRN
SGPAKEPIIGDMLEFHEGHIYHYAIYIGQGKTIGVHSPRAAFSIPRITIHPIAAWWRVCY
TPSADQRLTYDQLRELENEPWPYAAVTNNCYDFCCHVMGVQDTWLERRLITSGRFNHPTQ
DWSKETPDFQQDSKLEIVRDAVLAAINGLVSKPFKNLLNKLKPLNVLNLLSNCDWTFMGV
VETIILLMELFGVFWDPPDVSGFIASLLPDMHLQGPEDLARDLIPLILGGIGLAIGFTKD
KVTKVMKSAVEGLRAATQLGQYGLEIFAVIKKYFFGGDQTEKTLKDIEAAVIDMEVISTT
AITQLVRDKQSARTYMAILDAEEEKARRLSVKHADPHVVSTTNALISRISLARSALAKAQ
AEMTNRVKPVVIMMCGPPGIGKTKAAEYLAKRLANEIRPGGKVGLVPREAVDHWDGYHGE
EVMLWDDYGMSKIAEDCNKLQAIADTAPLTLNCDRIEKKGLQFVSDAIIITTNAPGPAPV
DFVNLGPVCRRVDFLVYCTAPEVEQVRRTSPGDTGALKDCFKSDFSHLKMDLAPQGGFDN
QGNTPFGKGTMRPTTLNRLLIQAVALTMERQDEFQMQGPTYDFDADRVSAFTSLARANGL
GLVGMAMLGKKLRNVDSVHGLKNALAGYTITPCSIKWQARIYDIESDGTTVTIKENATAQ
TQRQHAIDTAVLALTRLRAARAMAYASCLQSAVTTILQMAGSALVINRAVKRMFGTHTGT
ITLEGPAREHRCRAHVAKANGGGPIGHDDVIDKYGLCETEEDDEGQDIKAVIPSAAPEGK
NKGKTKKGRGRRTNYNAFSRRGLSDEEYEEYKKIREEKNGNYSIQEYLEDRQRYEEEMAE
VQAGGDGGIGETEMEIRHRVFYKSKSKKNRQEERHQLGLVTGSDIRKRKPIDWTPPKNEW
ADDDREVDYNEKISFEAPPTLWSRVVKFGSGWGFWVSPTVFITTTHVIPSNVREFFGEPI
DTIAIHRAGEFTQLRFSRKVRPDLTGMVLEEGCPEGVVCSILIKRDSGELLPLAVRMGAI
ASMKIQGRLVHGQSGMLLTGANAKGMDLGTLPGDCGAPYVYKRNNDWVVCGVHAAATKSG
NTVVCAVQAGEGETTLEGGDKGHYAGHEIVKHSNGPALSSKTKFWRSTTEPLPPGVYEPA
YLGGRDPRVKGGPSLQQVLRDQLKPFAEPRGRMPEPGLLEAAVETVTSMLEQTMDTPVPW
TYADACQSLDKTTSSGHPYHKRKNDDWNGTTFVGELGEQAAHANNMYEQGKSMKPLYTAA
LKDELVKPEKVYQKIKKRLLWGADLSTVIRAARAFGPFCDAIKSHVIKLPIKVGMNSIED
GPLIYAEHSRYKNHFDADYSAWDSTQNRQIMTESFSIMCRLTASPELASVVAKDLLAPSE
MDVGDYIIRVKEGLPSGFPCTSQVNSINHWLITLCALSEVTGLSPDVIQSQSYFSFYGDD
EIVSTDIDFDPARLTQVLKEYGLRPTRPDKSEGPIIMRRQIDGLVFLRRTISKDAAGFQG
RLDRASIERQLWWTRGPNHDDPSETLIPHPQRKVQLISLLGEASLHGEKFYRKIASRVIQ
EIKTGGLEMYVPGWQAMFRWMRFHDLGLWTGDRNLLPEFVNDDGV
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtcgaaagacgtcgttgcagctactgctgctagcgcttccaacgctagtgac
aatagtactacaattaaagatcgccttatggcgaaacttaagaatataggcactaacaac
aagcctataaaaattgaaaacacacacatggcccttgggctcatcaggggtagttcacca
acccccctgaaagagtcccccaaacaacagagggagcgggctccaaggagtgtggctgag
acccagcaggcgatgggctgggtggagcagccagtggatcaaaacttgccaacgtgggag
gagttgagtgaatcagagaagcgtgacatcttggctaagaatgagagatggtttgacgct
ggtggcctcggccccgccactctccctgactcatacgaacgtacctcacaaagtgattca
catgaacatcaggtcagatgggacgccaacacaggtgtggaccttggtatcagaggtttg
acatcggttgacggaccggcgtggaacatgtgcccgatgccccctatggaccagcgtaac
agcgggcctgctaaggaaccaatcataggtgatatgttggagttccatgagggacacatc
tatcactatgccatttatattggccaaggaaagactattggcgtgcactcaccacgagcg
gctttctcaattccaagaataaccatccatcctattgcagcttggtggagggtgtgttac
actccaagcgcagaccaacggctcacatacgatcagctaagagaattggaaaatgagccg
tggccttatgctgctgtgactaacaattgctatgacttctgttgccatgttatgggggtg
caggacacctggctagaacggcggcttatcacatctggccgcttcaaccaccccacccaa
gattggtctaaggagactccagacttccagcaagatagcaaactggagatagtcagggac
gccgttcttgccgccattaacgggcttgtctcaaaaccattcaagaatctcctcaacaag
ctgaagccccttaacgtccttaacttgttgtcaaactgtgattggaccttcatgggggtc
gttgaaaccataatactcctgatggaactatttggggtgttttgggatccccctgatgta
tcgggtttcatcgcttcacttttacctgatatgcacttgcagggtcctgaagacctggct
agggatctgataccattgatacttgggggaattgggcttgcaattgggttcaccaaagac
aaagtcaccaaggtcatgaagagtgcagtggagggcctccgtgcagccacccaacttggt
cagtatggcttggagatctttgcagtcatcaagaaatacttctttggtggagaccaaaca
gaaaagacactcaaggatatagaggccgctgtcatagacatggaggttatctcgacgact
gccataacccaactggttagggataagcagtctgcacgcacatacatggcaatcctcgat
gctgaggaagagaaagctagaaggttatcagtaaagcatgctgacccccacgttgtatca
accacaaacgccctcatctcacggatatcattggctcggtccgcgctagctaaggcgcag
gcagaaatgactaacagggtgaaacctgtcgtcataatgatgtgtggcccaccaggaatt
ggcaagaccaaggcagcagaatatttggccaagcggctagctaatgaaataagaccgggt
ggcaaggtcgggctggtcccacgtgaggctgtggaccactgggacggataccatggcgag
gaagtgatgctgtgggatgattatggtatgtcaaaaattgcggaggactgcaacaaacta
caggctattgcagacacagcccccttgaccctaaattgtgacagaattgaaaagaaggga
ctccagtttgtgtctgatgccataatcataactacaaatgcccccggccctgcgcctgtt
gactttgtgaaccttggccccgtttgtcggcgtgtggatttcctcgtctactgcacagct
ccagaggtcgagcaggtccggcgcaccagccctggggatacaggagctcttaaggattgt
tttaagagtgatttctcccatctaaaaatggaccttgcgccccaaggtggatttgataac
cagggtaatacgccttttggcaagggcacgatgcggcccaccacattaaaccgactacta
atacaggcagtggccctcaccatggagcggcaagatgaattccagatgcaaggcccaact
tatgactttgatgctgatagagtgtcagctttcaccagtctcgcccgtgcaaacggcttg
ggccttgttggcatggcaatgctggggaagaagctgagaaacgtggactcagtccatggc
ctcaagaatgcactcgctgggtacactataaccccatgcagcataaaatggcaggcaagg
atctatgacatcgagtctgatggcaccacagtcactatcaaggaaaatgctactgctcaa
acccagcgccagcacgcaattgacacagccgtgttggccctcacccgcctgagagctgct
agggctatggcgtatgcatcctgtctgcaaagtgctgttacaactatattgcaaatggcg
ggttcagcactagtcataaatcgtgccgtaaaacgcatgtttggcacgcatactggtacc
ataacactagaaggtcctgcccgggaacaccgctgcagggcccacgtagccaaggctaac
ggaggtggcccaattggacacgatgatgtcatagacaaatatggcctttgtgagacagag
gaagacgacgaaggccaagacataaaagctgtcattccctctgctgcccccgaaggtaag
aataagggaaaaaccaagaaggggaggggcagacgcaccaactacaatgcattctcacga
agggggctcagtgatgaagagtatgaggagtataagaaaataagagaagaaaagaatggc
aactatagcatacaagagtatcttgaagacaggcaacgctatgaagaagagatggctgaa
gtccaggctggtggtgacggcggcattggcgaaactgagatggaaatccgtcatagagtc
ttctataaatccaagagcaaaaagaaccgccaagaagaacgccaccaattgggccttgta
actggtagcgatatcaggaagaggaagccaattgattggaccccccctaagaatgagtgg
gctgatgatgatagggaagtggattataatgaaaagatcagttttgaagccccaccaacc
ctctggagccgtgtggtaaaatttggttctggatggggcttttgggttagccctacagtt
ttcataactaccacacatgtcatcccttcaaatgttagggaattctttggtgagccaatt
gataccattgccatccaccgcgcaggtgaattcacgcagcttagattctccaggaaagtg
cgacctgacttaaccgggatggtcttagaagagggttgccctgaaggagttgtctgttcc
atcttaataaaaagagactccggtgagctccttccccttgctgttcgtatgggtgctata
gcatcaatgaagattcaagggcgactggttcatggccaatcagggatgttactaactgga
gccaatgccaaagggatggatctaggaaccctgcccggagattgcggtgccccatacgtc
tacaaaaggaacaatgactgggttgtgtgtggggtgcatgctgcggcaacaaagtcaggg
aacaccgtggtgtgcgctgtccaagcaggggaaggagagactactctagagggtggtgat
aaagggcattatgctggccatgagatagtcaagcacagcaacgggcctgctctatccagc
aagactaagttttggagatcgacaactgaaccactcccacctggggtgtatgagccagca
tatcttggaggtcgcgaccctagggtaaagggcggcccttcactccaacaagtcctacgg
gatcaactcaaaccattcgctgagccccgtggacgcatgcctgagcctggtttgctggaa
gcggccgttgagactgttacatcaatgttagaacagactatggacacgccggtcccatgg
acatatgctgatgcttgccagtcactagacaaaactactagttcaggacatccatatcac
aagaggaagaatgatgattggaatggcaccacctttgtaggggagctgggcgaacaggcc
gcccacgccaacaacatgtatgagcaggggaagtccatgaagccactctacacggcagca
ttgaaggatgagctagttaagcctgagaaggtctatcagaagattaagaagcgactccta
tggggtgctgacttatccacagtgattagggcggcgagagcttttggccccttttgtgat
gccataaaatcccatgtcatcaagctccctattaaggttggcatgaactctattgaggat
ggccccctgatttatgctgagcattcaagatataaaaaccactttgatgctgactattcg
gcctgggattccactcaaaatagacaaatcatgactgagtccttctctataatgtgccgg
ctcaccgcatcacccgagttggcgtccgtagtggctaaggacctcctcgctccttccgaa
atggatgtgggtgactacataattagagttaaagaagggctcccctcaggattcccatgc
acatcacaagttaacagtatcaaccattggctcattactctctgtgcactctcagaagta
actggtctttcccctgatgtaatccagtcacaatcctatttctcattttatggggatgat
gaaattgtatcaactgatatagactttgatccagcccgattaacccaggtgctcaaagag
tatggacttcggcccacgcgcccagacaagagcgagggtcccataataatgaggagacag
atagatggtctggtattccttaggaggacgatttccaaggatgctgcagggtttcagggg
cgtctggatagagcctccattgaaagacagctctggtggacacgtggcccgaatcatgat
gaccctagtgagaccctaataccacacccacagaggaaagtacaactcatctcactcctt
ggtgaagcttcactccatggggaaaagttctatagaaagatagccagcagagtcattcaa
gaaattaagacggggggcttggaaatgtatgtgccaggttggcaggccatgttccgctgg
atgcgtttccatgaccttgggctttggacaggggatcgcaatctgctgcccgaattcgtg
aatgatgatggcgtctaa
DBGET
integrated database retrieval system
