Viruses: 80530579
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Entry
80530579 CDS
T40000
Symbol
ORF42, QKE36_gp42
Name
(RefSeq) Lumpfish ranavirus; DNA-dependent RNA polymerase II second largest subunit
KO
K26369
Iridoviridae putative DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Virus
2501771
Lumpfish ranavirus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
80530579
NCBI-ProteinID:
YP_010793864
RS:
NC_075538
LinkDB
All DBs
Position
NC_075538:45649..49314
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AA seq
1221 aa
AA seq
DB search
MSRGMTTEGASLTAAASSSASAWLTESTLSTPSSSGSSYPALSTFSSCSNSASSPDESDP
MSEMSPKISVASMILLKDLEEFLHLYVSSANMHPSNFVRHHIESFDDMLWNEFPAMVARE
KPVSVKGYRVKFGTVRYEPPCPDGKPWEKLTPAMARRTDATYHSVAVCDLTVTDPKGLET
VYPRLELCKIPVMVGSAVCWTRTEGSPLPGECPSDPGGYFIIKGKERVVVPHIRPAYDQP
CVYKNGDGWLCEFRSVNRETRQTVLVQAKTDCRRKLEFSLPYIKKYVPVGLVFKALGKTA
REAVAMCGLGSFSGDEVSCRTVHHQSMAALLMEQHASAPEDPVADLAKHVPDGRSVYSKQ
AEGAKQAEGADRASVEEDRNSKGSKEDYVRHVLAGEIFLHGGDAAEHLGWMVKRMADAAS
GIGTCTDRDDLANKRVDATGPLIAFLLDGLLKQYVKLFVKSAGCQKNLCPYTVLQNSMVM
TNSLHMCFATGNWTVKRLGAPSYVRVGVSQVLSNNNYGARVSHLRRIMHAVSFRGKNIRM
RQLHSSHYGFLCPYETPEGEKVGIVLNMAEGAGFSLETPRDAVLATVRLGKGLPGFFEGA
PARLAWSGAVGSASVDVDGVLCGVTGDPTGFVREARLCLPGVSVVWKKVEREIHLLGCQG
RFVRRLLDPEGIRGSGYDSPPAPEERDIEMDPAPSSSPSDSLPHPPGVYVCAQELSVCSL
GDGEYADPPASEILTDAMSSVIPFYDHTQSPRNAYQSNMGKQAIGFPAVNCSDRYDATLH
RLDYPQKSLVDSRSVKRLGFDEMAHGALPVVAIMTAGGFNQEDSVVLNASSLDRGLFSCV
TYRTVSCADKRRTKYDSEVVCLPDWGLRNREWDYDLLGDDGVIDPSCAGALARRVEGKRK
AAKRPADQRTGGGPAGLCDALWIPAGTVLVGKVSHSLGPGGNPVRRDASLTVKQSEEGYL
DRVTVDVDSDGKKLVKVRLRTPRHPEMGDKFASFTAQKGTCGAVLTQEDMPFDKDGVVPD
LIINPHAFPSRMTVNYLLQMCFGTTACKLGKTYDATAFEREDVVRDIAEAAKEAGIDCWD
SVLHSGSTGRRLPTKIFMAPCPYQRLRHMVSGKMHSRTHGPTDALTRQPVAGRSREGGIK
IGEMEQWCKISHGASESLKESVYDTSDKYEVPVCKECGRISDHFEYCRMCDATDVSLVKL
PYTTKILFQELRSIGISIDFK
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggggtatgactaccgagggcgcctccctgacggcggcggcctcctcctcggcc
tcggcctggttgactgaatcgactctgtcgaccccgtcgtcatcgggctcctcgtaccct
gccctctcgacgttttcgtcgtgctcaaactctgcctcgtccccggacgagtcggaccca
atgtctgagatgtctccgaaaatatctgtcgcgtccatgattcttttgaaagacctggaa
gaattcttgcatttatacgtttcaagtgcaaacatgcatccatccaattttgtgagacat
cacatcgagtctttcgacgacatgctgtggaacgagttcccggccatggtggccagggag
aaacccgtcagtgtcaagggctacagggtaaagtttgggaccgtgaggtacgagcccccg
tgcccagacggcaaaccctgggagaagctcaccccggcgatggccaggaggaccgacgcc
acctaccactctgtggcggtgtgcgacctgacagtcacggaccccaaggggctggagact
gtctaccccaggcttgagctgtgcaagatacccgtcatggtcggttcggccgtgtgctgg
accaggaccgaggggtcacctcttccgggagagtgcccctccgaccccggcggatacttt
attatcaagggaaaggagagggtggtggtgcctcacatcaggcccgcctacgaccaaccc
tgcgtttacaagaacggcgacgggtggctgtgcgagttcaggagcgtcaacagggagacg
aggcagacggtcctggtccaggccaagactgactgcaggcgcaagttagagttttccctg
ccctacatcaagaagtacgtgcccgtgggactggtctttaaggcccttggaaagacggcg
agggaggccgtggccatgtgtgggctggggtccttttcgggagacgaggtctcgtgcagg
acggtccaccaccagagcatggcggccctcctcatggagcagcacgcgtccgcccccgag
gaccccgtggcggatctggccaagcacgtccccgacggtaggtccgtctactcgaagcag
gccgaaggcgcgaagcaggccgaaggcgccgatcgggcctctgtggaagaggaccgcaac
tccaagggctccaaggaggactacgtcaggcacgtcctggccggcgaaatctttctccac
ggcggagacgctgctgagcacctggggtggatggtcaagaggatggcggacgcggcgtcg
ggtatagggacctgcacagacagggatgacctggccaacaagagggtggacgccactggc
cccctcatcgccttcctcctggacggtctcctgaagcagtacgtcaagctgtttgtaaag
tccgcggggtgtcagaagaacctgtgcccctacacagttttgcaaaactctatggtcatg
accaacagcctgcacatgtgcttcgccacaggcaactggacagtcaagaggctgggggcc
ccgtcttacgtgagggtcggtgtgtctcaggtcctctccaacaacaactacggagccagg
gtgagccacctcaggcgcatcatgcacgccgtaagcttcaggggtaaaaacatcaggatg
aggcagctccactcctctcactacgggttcctgtgtccctacgagacacctgagggagaa
aaggtgggcatagtcctcaacatggccgagggggcggggttctccctggagacacccagg
gatgccgtgctggccaccgtcaggctgggaaagggcctaccgggcttctttgagggtgct
cccgccaggctggcgtggtccggcgctgtggggtccgcgtctgtggacgtggacggggtc
ctgtgcggcgtgacgggtgaccccacggggtttgtgagggaggccaggctctgtctcccc
ggtgtgagcgtagtgtggaaaaaggtggagagggagatacacctcctcgggtgccaggga
aggttcgtgaggaggttgctggacccagaggggatcagggggtccggatacgacagtcct
ccggcccccgaggagagggatatagagatggaccccgctccctcctcgtccccgtcggac
tctctccctcaccctccaggagtctatgtgtgcgcccaggagctgtctgtatgctctctt
ggggacggagagtacgccgaccctcccgcctctgagatactgactgacgccatgtcttcg
gtcatacccttttacgatcacacccagagccccaggaacgcctaccagtccaacatgggg
aagcaggccataggcttccccgccgtaaactgctcagacaggtacgacgccaccctgcac
aggctggactacccccaaaagagcctggtggactctaggtccgtaaagaggctgggtttc
gacgagatggcccacggggccctgccggtggtggccatcatgacggcgggaggcttcaac
caagaggacagcgtggtcctcaacgcctcctcgttggacaggggcctcttttcctgtgtc
acctacaggaccgtgtcctgcgccgacaagaggaggacaaagtacgacagcgaggtggtg
tgcctccccgactggggcctgaggaacagagagtgggactacgacctgctgggagacgac
ggggtgatagacccgtcgtgcgcgggggccctcgccaggagggtagagggaaagagaaag
gcggccaagaggcccgcggaccagaggacgggaggaggtcccgcgggactgtgcgacgcc
ctgtggataccggcgggcacggtcctggtggggaaggtgtctcactccctgggaccggga
ggcaaccccgtgaggagggacgcatccctgactgtgaagcagtccgaagagggctacctg
gacagggtgactgtggacgtggactctgacggcaagaagctcgtcaaggtgaggctgagg
acccccaggcacccagagatgggtgacaagtttgcgtcgttcacggcgcaaaaggggaca
tgcggagccgtcctgacccaggaggacatgcccttcgacaaggacggggtggtgcccgac
ctcatcatcaacccccacgcctttccctccaggatgaccgtaaactacctcttgcagatg
tgcttcgggaccacggcgtgcaagctgggcaagacctacgacgccaccgccttcgagagg
gaggacgtggtgagggacattgcggaagcggcgaaagaggctggcatagactgctgggac
agcgtcctccactcgggctcgacgggcaggaggctccccacaaagatctttatggcgcct
tgtccctaccagaggctcaggcacatggtgtctggaaagatgcacagtaggacccacgga
cccaccgacgctctcaccaggcagcccgtggcgggcaggtccagggaggggggcataaag
atcggggagatggagcagtggtgtaaaatctctcacggggcctcagagtccctgaaagag
tctgtgtacgacacgagcgacaagtacgaggtcccggtgtgcaaagagtgcggcaggatc
tcggaccacttcgagtactgcaggatgtgcgacgcgacggacgtgtctttggtgaagctc
ccctacacgaccaagattctgtttcaggaactgaggtccatcgggatttccatagacttc
aagtga
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