Viruses: 80539971
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Entry
80539971 CDS
T40000
Symbol
NSP, QKT28_gp1
Name
(RefSeq) Rubella virus; non-structural polyprotein p200
Virus
11041
Rubella virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
Peptidase_C27
Rubi_NSP_C
Macro
RdRP_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-GeneID:
80539971
NCBI-ProteinID:
YP_010801281
RS:
NC_076948
LinkDB
All DBs
Position
NC_076948:41..6391
Genome browser
AA seq
2116 aa
AA seq
DB search
MEKLLDEVLAPGGPYNLTVGSWVRDHVRSIVEGAWEVRDVVTAAQKRAIVAVIPRPVFTQ
MQVSDHPALHAISRYTRRHWIEWGPKEALHVLIDPSPGLLREVARVERRWVALCLHRTAR
KLATALAETAGEAWHADYVCALRGAPSGPFYVHPEDVPHGGRAVADRCLLYYTPMQMCEL
MRTIDATLLVAVDLWPVALAAHVGDDWDDLGIAWHLDHDGGCPADCRGAGAGPTPGYTRP
CTTRIYQVLPDTAHPGRLYRCGPRLWTRDCAVAELSWEVAQHCGHQARIRAVRCALAIRH
VRSLQPSARVRLPDLVHLAEVGRWRWFSLPRPVFQRMLSYCKTLSPDAYYSERVFKFKNA
LSHSITLAGNVLQEGWKGTCAEEDALCAYVAFRAWQSNARLAGIMKGAKRCAADSLSVAG
WLDTIWDAIKRFFGSVPLAERMEEWEQDAAVAAFDRGPLEDGGHHLVTVQPPKPPPRPEI
AATWIVHAASADRHCACAPRCDVPRERPSAPPGPPDDEALIPPWLFAEHRALRCREWDFE
ALRARADTAATPAPLAPRPARHPTVLYRHPAHHGPWLTLDEPGEADAALVLCDPLGQPLR
GPERHFTAGAHMCAQARGLQAFVRVVPPPERPWADGGARTWAKFFRSCAWAQRLLGEPAV
MHLPYTDGDVPQLIALALRTLAQQGAALALSVRDLPGGAAFDANAVTAAVRAGSSQPAPA
APPPDNSSPPRRARRSRRPPDTRGPPPSAPARDPPPPAPSPPTPPRARGPAPATLEEPAD
RARDAEQEVACDPSGPAAPTRADPNSDIVESYARAAGPVHLRVRDIMDPPPGCKVVVNAA
NEGLLAGSGVCGAIFAKAAAALAEDCRRLAPCPTGEAVATPGHGCGYAHIIHAVAPRRPP
DPAALEQREALLERAYRSIVALAAARGWACVACPLLGAGVYGWSAAESLRAALAATRAEP
AERVSLHICHPDRATLTHASVLVGAGLAARRVSPPPTEPLAPRPVGDPGRSTQRSASPPA
TPSGEATAPESRGCQGCELCRYTRVTNDRAYVNLWLERDRGATGWAMRIPEVVVYGPEHL
AAHFPLNHYSVLKPAEVRPPRGMCGSDMWRCRGWQGMPQVRCTPSNAHAALCRTGVPPRV
STRGDERDPNTCWLRAAANVAQAARACGAYTSAGCPRCAYGRALSEARTHEDFAALSQRW
SASHADASPDGTGDPLDPLMETVGCACSRVWVGSEHEAPPDHLLVSLHRAPNGPWGVVLE
VRARPEGGNPTGHFVCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDLE
VRRLGDDAMARAALAAVQRPRKGPYNIMVWNMAAGAGKTTRILAAFTREDLYVCPTNALL
HEIQAKLRARDIDIKNAATYERALTKPLAAYRRIYIDEAFTLGGEYCAFVASQTTAEVIC
VGDRDQCGPHYANNCRTPVPDRWPTERSRHTWRFPDCWAARLRAGLDYDVEGEHAGTFAC
NLWDGRQVDLHLAFSRETVRRLHEAGIRAYTVREAQGMSVGTACIHVGRDGTDVALALTR
DLAIVSLTRASDALYLHELEDGSLRAAGLSAFLDAGALAELKEVPAGIDRVVAVEQAPPP
LPPADGIPEAQDVPPFCPRTLEELVFGRAGHPHYADLNRVTEGEREVRYMRISRHLLNKN
HTEMPGTERVLSAVCAVRRYRAGEDGSTLRTAVARQHPRPFRQIPPPRVTAGVAQEWRLT
YLRERIDLTDVYTQMGVAARELTDRYARRYPEIFAGMCTAQSLSVPAFLKATLKCVDAAL
GPRDTEDCHAAQGKAGLEIRAWAKEWVQVMSPHFRAIQKIIMRALRPQFLVAAGHTEPEV
DAWWQAHYTTNAIEVDFTEFDMNQTLATRDVELEISAALLGLPCAEDYRALRAGSYCTLR
ELGITETGCERTSGEPATLLHNTTVAMCMAMRMVPKGVRWAGIFQGDDMVIFLPEGARGA
ALKWTPSEVGLFGFHIPVKHVSTPTPSFCGHVGTAAGLFHDVMHQAIKVLCRRFDPDVLE
EQQVALLDRLRGVYAALPDTVAANAAYYDYSAERVLAIVRELTAYARGRGLDHPATIGAL
EEIQTPYARANLHDAD
NT seq
6351 nt
NT seq
+upstream
nt +downstream
nt
atggagaaactcctagatgaggttcttgcccccggtgggccttataacttaaccgtcggc
agttgggtaagagaccatgtccgctcaattgtcgagggtgcgtgggaagtgcgcgatgtt
gttaccgctgcccaaaagcgggccatcgtagctgtgatacccagacctgttttcacgcag
atgcaggttagtgatcacccagcactccacgcaatttcgcggtatacccgccgccattgg
atcgagtggggccctaaagaagccctacacgtcctcatcgaccccagcccgggcctgctc
cgcgaggtcgctcgcgtcgagcgccgctgggtcgcattgtgcctccacaggacggcacgc
aaactcgccaccgccctggccgagacggccggtgaggcgtggcacgccgactacgtgtgc
gcgctgcgtggcgcaccgagcggccccttttacgtccacccagaggacgtcccgcacggc
ggtcgcgccgtggcggacagatgcttgctttactacacacccatgcagatgtgcgagctg
atgcgcaccatcgacgccaccctgcttgtggcggttgacttgtggccggtcgcccttgcg
gcgcacgtcggtgacgactgggacgacctgggcatcgcctggcacctcgaccacgacggg
ggttgccccgccgactgccgtggcgccggcgctgggcccacgcccggctacacccgcccc
tgcactacgcgcatctaccaggtcctgccggacaccgcccaccccgggcgcctctaccgg
tgcgggccccgcctgtggacacgcgattgcgccgtagccgaactttcatgggaggtcgcc
cagcattgcgggcaccaggcgcgtattcgcgccgtgcgatgcgccctcgccattcgccac
gtgcgcagcctccaacccagcgcgcgcgtccggctcccggaccttgtccatctcgccgag
gtgggccggtggcggtggttcagcctcccccgccccgtctttcagcgtatgctgtcctat
tgcaagaccctgagcccggacgcgtactacagcgagcgcgtgttcaagttcaagaacgcc
ctgagtcacagcatcacgctcgcgggcaacgtgctgcaggaggggtggaagggcacgtgc
gccgaggaggacgcgttgtgtgcgtacgtggccttccgcgcgtggcagtccaacgcgagg
ctggccgggatcatgaaaggcgcgaagcgctgcgccgccgactccttgagcgtggccggc
tggcttgacaccatctgggacgccatcaagcggttcttcggcagcgtgcccctcgccgag
cgcatggaggagtgggagcaggacgccgcggtcgcggcctttgatcgcggcccccttgag
gacggcgggcaccacttggtaaccgtgcaacctcccaagccgccgccccgccccgagatc
gccgcaacgtggattgtccacgccgcgagcgcagaccgccactgtgcgtgcgccccccgc
tgcgacgtcccacgcgaacgcccctctgcgcctccgggcccgccagatgacgaggcgctc
atcccgccgtggctgtttgccgagcaccgcgcccttcgttgccgcgagtgggatttcgag
gcccttcgcgcgcgcgccgacacggcggccacgcccgccccactagccccacgccccgcg
cgccaccccaccgtgctctaccgccaccccgcccaccacggcccgtggctcactcttgac
gagcccggcgaggctgacgcggccctggtcttatgcgacccacttggccagccgctccgg
ggcccggagcgccatttcaccgccggcgcgcacatgtgcgcgcaggcgcgggggctccag
gcctttgtccgcgtcgtgcccccgcccgagcgcccctgggctgacgggggcgctagaacg
tgggcgaagttcttccgcagctgcgcctgggcacagcgcttgctcggcgagccggcagtc
atgcacctcccgtacaccgacggcgacgtgccgcagctgattgcgctggccctgcgcacg
ctggcccaacagggggccgccttggcactctcggtgcgtgacctgcccgggggcgcggcg
ttcgacgccaacgcggtcaccgccgccgtgcgcgcgggctccagtcagcccgcgccggcc
gcaccccccccggacaactcctcgccaccacgccgtgcacggcggtcgcggcgacccccg
gacacccgcggccctccgccctccgcgcccgcccgcgacccgccgccgcccgcccccagc
ccgcccacgccaccccgcgcgcgcggcccggccccagccaccctagaggagcccgcggat
cgcgcgcgtgacgccgagcaggaggttgcctgcgacccgagcggccccgccgcgccaacc
agggcggacccaaacagcgacatcgtcgaaagctacgcccgcgccgccggtcctgtgcac
cttcgcgtccgcgacatcatggaccccccacctggttgcaaggtcgtggtcaatgccgcg
aacgaggggctgctcgccggatctggcgtctgcggtgccatcttcgccaaagccgccgcg
gccctcgccgaggactgccggcgcctcgccccatgccccaccggcgaggcggtggcgacg
cccggccacggctgcgggtatgcgcacatcatccacgcggtcgctcctcggcgccctccg
gaccccgccgccctcgagcagcgcgaagccctgctcgaacgcgcctaccgcagcatcgtc
gcgctggccgccgcgcgggggtgggcgtgtgttgcctgccccctcctcggcgctggcgtc
tacggctggtctgccgcggagtcccttcgagccgcgctcgcggccacgcgcgccgagccc
gccgagcgcgtgagcctgcatatatgccaccccgaccgcgccacgctgacgcacgcctcc
gtgctcgtgggcgcggggctcgctgccaggcgcgtcagcccccctccgaccgagcccctc
gcaccccgccccgtcggcgacccgggccgatcgacccagcgcagcgcgtcacccccggcc
accccctctggggaggccaccgcgcctgagtcgcgcgggtgccaggggtgcgaactctgc
cggtacacgcgcgtcaccaatgaccgcgcgtatgtcaacctctggctcgagcgcgaccgc
ggcgccaccggttgggcgatgcgcatccccgaagtggtcgtctacgggccggaacacctc
gccgcgcactttccattaaaccactacagtgtgctcaagcccgcggaggtgaggcccccg
cggggcatgtgcgggagtgacatgtggcgctgccgcggctggcagggcatgccgcaggtg
cggtgcaccccctccaatgctcacgccgccctgtgccgcacaggcgtgccccctcgagtg
agcacgcgaggcgatgagcgagaccctaacacctgctggctccgcgccgccgccaacgtt
gcgcaggctgcgcgcgcctgcggcgcctacacgagtgccgggtgcccccggtgcgcctac
ggccgcgctctcagcgaagcccgcacccacgaggacttcgccgccctgagccagcggtgg
agcgcaagccacgccgacgcctcccctgacggcaccggagaccccctcgaccccctgatg
gagaccgtgggctgcgcctgttcgcgcgtatgggtcggctccgagcacgaggcccccccc
gaccacctcctggtgtccctccaccgtgcgcccaacggtccgtggggcgtggtgctcgaa
gtgcgcgcgcgccccgaggggggtaaccccaccggccactttgtttgcgcggtcggtggc
ggcccacgccgtgtttcggaccgcccccacctttggctcgcggttccactctcccggggc
ggaggcacttgcgccgcgaccgacgaggggctggcccaggcgtattacgacgacctcgag
gtgcgccgcctcggggacgacgccatggctcgggcggccctcgccgcggtccaacgcccc
cgcaagggcccctacaacatcatggtatggaacatggccgcgggcgctggcaagaccact
cgcatcctcgccgccttcacgcgcgaagacctgtacgtctgccccaccaacgcgctcctg
cacgagatccaggccaaactccgcgcgcgcgacatcgacatcaagaacgccgccacctac
gagcgcgcgctgacgaaaccgcttgccgcctaccgccgtatctacatcgacgaggcgttc
accctcggcggcgagtattgcgcgttcgttgccagccaaactaccgcggaggtgatctgc
gtcggcgatcgggaccagtgcggcccgcactacgccaacaactgccgcacccccgtccct
gaccgctggcccaccgagcgctcacgccacacttggcgtttccccgattgctgggcggct
cgtttgcgcgcggggctcgactacgacgtcgagggcgagcacgccggcacttttgcctgc
aacctctgggacggccgccaggtcgacctccacctcgccttctcgcgcgagaccgtgcgc
cgccttcacgaggctggcatacgcgcatacaccgtgcgcgaggcccagggcatgagcgtt
ggcaccgcctgcatccacgtcggtcgggacggcacggacgtggccctggctctgacacgc
gacctcgccatcgtcagcctgacccgggcctccgacgccctctacctccacgagctcgag
gacggctcactgcgcgctgcggggctcagcgcatttctcgacgccggggcactggcggag
ctcaaggaggttcccgccggcatcgatcgcgtcgttgccgtcgagcaggcgccgccacca
ttaccgcccgccgacggcatccccgaggcccaggacgtgccgcccttttgcccccgcacc
ttggaggagctcgtcttcggccgcgccggccacccccattacgcggacctcaaccgcgta
accgagggcgagcgagaggtgcggtacatgcgcatctcgcgtcacctgctcaacaagaac
cacactgaaatgcccgggacggaacgcgttctgagcgccgtttgcgctgtgcggcgctac
cgcgcgggtgaggacgggtcgaccctgcgcaccgccgtggcccgccagcacccgcgcccc
ttccgccagattccacccccgcgcgtcactgctggagtcgctcaagagtggcgcctgacg
tacctgcgggagcgaatcgacctcaccgacgtctatacacagatgggcgtggccgcgcga
gagctcaccgaccgctacgcgcgccgctaccccgagatttttgccggcatgtgcaccgcg
cagagcctgagcgtccccgccttcctcaaagccaccttgaagtgcgtggacgccgccctc
ggccccagggacaccgaagactgccatgccgcccaggggaaagccggcctcgagatccgc
gcatgggccaaagagtgggttcaggtcatgtccccgcacttccgcgccatccagaagatc
attatgcgcgccttgcgcccgcaatttctcgtggccgccgggcacacggagcccgaggtt
gacgcgtggtggcaggctcactacaccaccaatgccatcgaggtcgatttcaccgagttc
gacatgaatcagacccttgccactcgggacgtcgagctcgagatcagcgccgctctccta
ggcctcccctgcgccgaagactaccgcgcgctccgcgccggcagctactgcaccctgcgc
gaactgggcattactgagaccggctgcgagcgcacaagcggcgagcccgccacgctactg
cacaacaccaccgtggccatgtgcatggctatgcgcatggtcccgaagggcgtgcgctgg
gccgggattttccagggtgacgacatggtcatcttcctccctgagggcgcacgcggcgcg
gcactcaagtggaccccctctgaggtcggcttgtttggcttccacatcccggtgaagcac
gtgagcaccccaacccccagcttctgcggacatgtcggcaccgcggccggcctcttccac
gatgtcatgcaccaggcaatcaaggtgctctgccgccgctttgaccccgacgtgctcgag
gaacagcaggtagccctccttgaccgcctccggggagtctacgcggccctgcccgacacc
gttgctgccaacgccgcgtactacgactacagcgcggagcgcgttctcgcgatcgtgcgc
gaactcaccgcatacgcgcgggggcgcggccttgatcatccggccaccatcggcgcgctt
gaggaaatccagaccccctacgcgcgcgccaacctccacgacgccgactag
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