Viruses: 80548692
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Entry
80548692 CDS
T40000
Symbol
QK650_sLgp1
Name
(RefSeq) Pacific coast tick nairovirus; glycoprotein
KO
K24573
Orthonairovirus envelopment polyprotein
Virus
1977074
Pacific coast tick nairovirus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
Hanta_Gc_N
Nairovirus_Gn
Hanta_Gc_C
Phlebo_G2_C
Motif
Other DBs
NCBI-GeneID:
80548692
NCBI-ProteinID:
YP_010115378
RS:
NC_055922
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Position
NC_055922:64..4146
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AA seq
1360 aa
AA seq
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MQESECKPLVCYKSFFESMDPKALIVGILILVYIHSSSPEGANNTTTTTISTTTVAASSN
VSTPSPNTTSGPDEFTLWYTVGKDLFTNVTSLARQTVKRSVEQIRSWGSGVEAIMLPASI
EGKWQALKLIYKAGEPFEQFVNKLKGKSTAEIFSEASLHVAASLSETALYAISGLGNLEL
LSHRVDGLGSVYFLNNRTGGVTPWEGLSNSLPRSTCKGSRQVVNQPFKSVNIEVHYDVKN
TFTTIAYLTSYLGIEVINCPAIIENHGSIALLDKSASLVRVPADDGMVYPIYHITIDHLK
LDDNCHVVLCSMREDHYPTKGQIKEADIEKVHFVFTPAARSVRRKLLSIISSPPRLPCST
GTKVVSTIKYEVNTPDHPRAGPYRTFCNGTKTVASYAPSELGCFSTTRKVVRIQCPTQPE
HVTLEAGDCSYTRTTDGCPKGHMCITVLTPGRGVVKFATEKERTVEDCIKSCSFSLPGLE
ATLTCPNGEKHSLVSSEISPKCLMSEYGRLPLWVCRMSFRPVVVYILCAWYFLGYLIWRV
LIVLLCLSLSLTARVIKFIRVRKDDTRGICDQCQLFVEGRLHWQRHENCKNGRCPFCRTS
CSTGRLQTHVKECIQRPRCQQEDEEAVTIRYVPYMMRVVTVWLSSMSKTVSKTAWLVGIF
VLAYTCVHPAYGLMDTVEEEDLWQKEVDFVNFCDINCYQGEDDCTCGSLGDNVPVLLRKP
LSTFPGEDMIKQLVKGRRKPAPGTNVQSKKRVIDVTAPWGSLHVDSAYKPSYSGSHISLS
WTEVSSTDEHITLNGKSQAVLNLEAGTGLMWEIKSPKAAESKRVFVSILDHTQVYSSRFL
YGTGDREIETWMHGRCTGDCPERCSCDSHLCHHSEFDDFTSWKCNPTWCWSIGSGCACCA
LDVKTPFQDWFVTKWELEYVDSPVIACIETSSEDRICQQVSAGVTLQLGPISVQFSDPSG
ISKKLPREVAVFHKTPKQDLFDIAKKVKLVDARTMCDIQSCTHGPVGDFQVYSISPLFNR
DHTSLTPLANREYLNKTNSWVSWAGVSSFYTCHPGHWPDCHSTGVVQRNTDAFENLWRGG
DASVNYFFHSEQINISGPPTMNLKGRPWMGAGQITAMLDVQGLVLKSVKVKPEGLHLDVS
NCHGCYGCSSGFTCTIRVQITHPDQFTVHLMSEDPNIITPSLSILAKNDQTQSQELFFYA
ATDTTDFCVRIKEPNADGTVARGCAKATLVAQEGVVLEHRRTLHSTSNSTCVSGYFACLF
ANSGDFFKNLGGFLGSFFGRFAIGVVVFIIIVSVVALLVFCGPNCFRLLGTCWIRRKGYR
KLIPFEEIREEWTAARKGVEEEKQRGAAAQALIDKLSKSK
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggaaagtgagtgtaaacctttggtgtgctacaagtctttctttgagagcatggat
cccaaagccctcatcgttgggattctcattcttgtatatatacattcatcatcacccgaa
ggtgccaacaacaccactacgaccacaatcagcaccaccacagtggcagcgagcagcaat
gtctcaacaccctccccgaacaccacctctggaccagacgagttcaccctttggtacaca
gtgggcaaggacctctttacaaatgtaacctctctcgctaggcagacagtgaagcgcagc
gtcgaacagatacgctcctggggcagcggtgtggaggcgataatgttgcccgctagcata
gagggaaagtggcaggccctaaagctcatttacaaggctggagagccgtttgagcagttt
gtcaacaagcttaaaggaaaatccactgctgagatctttagcgaggcaagcctccatgtg
gcagcatccttgagcgaaactgccttgtacgccattagtgggctaggaaacttggagttg
ctgagccacagggtggatggcctagggtctgtttacttccttaacaataggacaggtggt
gtcacaccatgggaggggctctctaacagtctgcccaggtcgacatgcaaaggttctaga
caagtggtcaaccagcctttcaagtcagtcaacatcgaggtgcactatgatgtcaaaaac
accttcaccaccatcgcctacctaacttcctacttgggaattgaggtcatcaactgtcca
gccattatagaaaatcatggcagcattgcactcctggacaagtcagccagcttggtgagg
gtgccagcagatgatggcatggtctaccctatataccacatcactatagaccacttgaag
cttgatgataactgccatgttgtgctctgttctatgcgagaagaccactacccaacaaaa
gggcaaataaaggaggccgacatcgagaaggtgcacttcgtcttcacccctgcagcaagg
tctgtgcgcaggaaactcctttccatcatctcatccccgcccaggctcccatgcagcaca
ggcaccaaagtggtcagtaccatcaaatacgaggtcaacactcccgaccaccctcgagct
ggaccataccgcaccttctgtaatggtacaaagactgtagctagttacgctcccagtgag
ctaggatgcttcagcactacaaggaaggttgtgaggatacagtgcccaacccaaccagag
catgtgacattagaggcgggagactgttcttacaccaggaccactgacggctgcccaaaa
ggccacatgtgcatcactgtcctaacacctgggcgaggagttgttaagtttgccactgag
aaggaaaggacagtagaagattgtatcaagagctgttccttctcacttccaggtttggag
gcaaccttgacctgtccaaatggggaaaagcactccctagtgagctctgagatatcaccc
aagtgcctgatgtctgagtatggcaggctcccactgtgggtttgcagaatgagctttagg
cccgttgttgtctacatcctctgtgcatggtacttcctgggctacctcatatggagggtg
ttaattgtattgttgtgcctctccttgagtctcactgcaagggtcatcaagttcatcaga
gtgaggaaagatgacacaagaggcatctgtgaccagtgccagctcttcgtggagggcagg
ctgcattggcaaagacatgagaactgcaaaaacggccgctgtccattctgcagaactagc
tgcagcactggtagactacagactcacgtcaaggagtgcattcagcggcctaggtgccag
caagaggatgaggaagcagtcacaattagatatgtcccatacatgatgcgagttgtgaca
gtctggctatcctcaatgtcgaaaacagtgagcaaaacagcctggctcgtaggtatcttt
gtccttgcctatacatgcgttcatcctgcctatggcctcatggacacagttgaggaggaa
gacctctggcagaaagaagttgacttcgtcaacttctgtgacatcaactgctaccaaggt
gaggacgactgtacctgcggcagcctgggtgataatgtaccagttctactgaggaagccc
ttatccactttccctggtgaagatatgatcaagcagctggtcaaggggagaaggaagcct
gcacccgggaccaatgtacagtctaagaaacgcgtaatagacgtgacagcaccctggggc
tcccttcacgtcgacagtgcttacaaaccctcttacagtgggagtcacatctcgttgtca
tggacagaggtctcatcaactgatgaacacatcactctaaatggaaagtcacaggctgtc
ttgaacctggaggcaggcacaggactcatgtgggaaatcaagtctcccaaggctgccgag
tccaagcgcgtgttcgtttccatactcgatcacacacaggtgtactcttcaaggttcttg
tatgggacaggagacagggagattgagacctggatgcacggtaggtgcacgggggactgt
ccagaaaggtgttcttgtgatagccatctctgtcatcacagtgaatttgatgacttcact
agttggaagtgcaaccccacctggtgctggagtattggttctggctgtgcctgttgtgct
ctggatgtaaagacccctttccaagactggtttgtcacaaagtgggagttggagtatgtc
gacagcccggtgattgcctgtattgaaacaagctcagaggacaggatctgccagcaagtt
tcagctggtgtaaccttacagctagggcccatctctgtgcagttcagtgatccctcaggc
atcagcaagaagctcccaagagaggtggccgtatttcacaaaacaccaaagcaagacctc
tttgacattgccaagaaagtgaaactggttgatgcccggacaatgtgtgacatacagtct
tgcacacatgggcctgtaggtgactttcaagtctattctatcagccctcttttcaaccgt
gaccatacaagcctaacacctctggcaaatagggagtatttgaacaagaccaactcctgg
gtctcctgggcaggagtcagtagcttctacacttgccacccaggacactggcctgactgc
catagcactggtgtggtgcagcggaatacagacgcgtttgaaaacctctggaggggagga
gacgcatctgtaaactacttcttccactcagaacagatcaacatatcagggcctccaacc
atgaacttgaaaggacggccttggatgggagcgggtcagattaccgctatgcttgacgtg
caaggacttgtgcttaaatctgtcaaggtgaagccggaaggccttcacctggacgtaagc
aactgtcacggctgttatggctgttctagtggcttcacctgcaccatcagggtccaaatc
acccacccggaccaattcacagttcacctgatgtctgaggaccccaacataatcactcct
tcattatccatccttgcaaagaatgatcagacccagtctcaggaactgtttttttatgct
gccactgataccactgatttctgtgtgcgcatcaaggaacccaatgctgacggcacagtt
gccagagggtgtgccaaggccaccttggttgcccaagaaggggttgtacttgagcaccga
agaaccctccactccacctccaattcaacctgtgtgagtggctactttgcgtgtttgttt
gccaacagtggtgacttcttcaaaaatcttggtggcttcttggggtcattctttggcagg
tttgcaataggagtggtggtattcataatcatagtctctgttgtagcattgcttgtcttt
tgcgggcctaactgcttcaggctccttggcacctgctggatccgacgcaagggatacagg
aagctcatcccctttgaagaaatcagggaagagtggactgctgcccgtaagggtgtggag
gaggagaagcaaagaggggctgctgcacaggcgctcattgataagctgtcaaagtctaag
tga
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