Viruses: 80553731 Help Entry 80553731          CDS       T40000                                  Symbol QK805_sLgp1 Name (RefSeq) San Juan virus; L   KO K25345   Peribunyaviridae RNA-directed RNA polymerase L [EC:2.7.7.48 3.1.-.-] Virus 2748232  San Juan virus Taxonomy SSDB OrthologParalogGFITVogVog cluster Motif Pfam:  Bunya_RdRp L_thumb_ring_vir L_protein_N DUF1690 Motif Other DBs NCBI-GeneID:  80553731 NCBI-ProteinID:  YP_010840653 RS:  NC_078904 LinkDB All DBs Position NC_078904:46..6867 Genome browser AA seq 2273 aa AA seqDB search MNETLEDDLKALEGRLKGVRETSDGKELFTAILVRRHDYFGHELCKAMDIPYRNDVKLVD ILHECFHDIDTGDIVIPNITPDNFIYDGEILTILDYKVSVSLESTEHTIDKYTKELDKIR HFLPSRVELCIIRCHPRTTKLTFTNDRIKRMYANIQLELNFEPFENLITELKDRFRDSDE FLAMIAHGDVTLTVKWCQTGCPELRQHPIFNEFYESLDEEYKEMFDRSMEFSAYSAEKWN QNLIRIRDQTSEDYKDFVKRNSSELFQTDGNYPEPSREEILAGWDEMSERIQQTRQVSKD VNDQKPSIHFIWSEHNPGLPTHSTHKLMMISKLLQNISSNSDYADDFRQIGKLMDIGDNV LAYENHCESLKLEARKNLKPIQNRKLNPKRIGNAQVLWEQQFLMSAEDMGKARKVHLLKE YFGIGRHKDFSHKTNTDINMDKPKILDFNDPDIIRMSQIMMEKTSGILSQQTTLKPNHAI VDEYMDNIKEANENTYKTIKQILSTKYWSCISDISMLMKNILSVAQYNRSHTFRLAMCAN NSLYALVLPSADIKSRKSTVVFCIIALHTEEEAVFNPGCLHSTYKTFTSDKTGWLSISKA IRLDKERCQRIVTSPGLFLSTVTLLKQDNNSIDLNDVMNFALFTSLNVTKSMLSLTEPSR YMIMNSLAVSSHVKEYISEKFNPYTKTLFSVYMCNKIKTGCLNAFNQRQKIKLRDIFLTD FDITQKGISDSRDLTSIWFPGFVTLKEYLNQIFLVFYLNPKGLHEKHHVMIDLLKTVIEI ELDQRNNIPVPWSETPKKQTVNLPIFLNSVAINLMHDTAYCTHLRSRIENRNNLRRSFST ISTFTSSKSCIKVGDFSSIKTEINRKIEKARKSEEKRSRIANPDFIHDEEYKNVVEHCNY DMMRKAIPDYTDHISTKVFDRLYELQKNRVITDEPVVGQILDMMVNHKQFYFSFFNKGQK TAKDREIFVGEYEAKMCMYLVERIFKERSKVNPDEMISEPGDGKLKVLERKAEQEIRYLI ERIKQRNSPIMEEIENLKESVLFDKSKLEDLVNSKYHGLKLEINADMSKWSAQDVFFKYF WVIAMDPILYPEEKERIIFFFCNYMNKRLIIPDEVIYTILDQQIPYKNDMVMQVTNGLHS NTFNVKRNWLQGNFNYMSSYVHSCAMSVYKDILRAAAKRIEADILVNSMVHSDDNQTAIC LINNRLDTRVFTKFAIQLFEKICLTFGCQANMKKTYVTNHIKEFVSLFNLYGEPFSVYGR FTLTAVGDCAYIGPYEDLASRISSTQTAVKHGCPASLAWLSISISHWITYLTYNMLPGQI NDPSMSLGIDNRREIPIELGGYLEADLSMIALAGLESGNIQFLINLLTKMVNPILFREDV VSQCSDIKNWDLAKLTFSEVFRLKVLRFLALDAEMDCSDTMGETGEMRSRSLLTPRKFTT AGSLRKLVSFGDFQSCQSEPEGINTVVEYMLEHPELLVTKGETVEDYRNIVLYRYNSKRF KESLSIQNPAQLFLEQILFSHKPIIDYTGIQEKYLNLSDSTVTEDQPEILGRVTFPEAFR KIREDLSTLKLTINDVQTVYDFVILNDPMIIAIANAHLLSNQGAMQDRLGSSCSTMPEFR NLRLITHSPALVLRSYSTGRYDVPGADPDEMRRDRTHLQEFIDNTKLLLKMEQRIEQNEK AKGTRDILFEIKEITKFYQVCYEYIKSTEHKVKVYILPVKCYTTTDFCAAIQGSLIKDKQ WAIIQHIHPVSAGGHKGIVQKHTTNEIKLAEDCMRLIAFFIDTFIDENYRIYMFRRMIDE FSYSGRKVSDLLDIIATSKNRVDFLPILYRSGLLEQKDLDSYDALKSSGRPTWNKWQTTR ALDMGKIDLSIDTHRSSIRIIGEDRNLHYAELYLPSINYDSITRSGYKLLNAKHGLKFQS MSEVSVRKDEWYITYQRKSRDNYVYKIFYGKKLLNPLPEHDLRYNRTTNPIVPVCHVIPM IRPDIDRIILEDMDSLNIENFKIGVLNTGVGEQARLRRCMLHKMKNFEGPDIKSRVINLT KLMKDNTLMSLNYDNVCNVHLSQFCKLLDCNGNEGTLDDAMYSFSDEPMEQTQVDEVECT PIFKVQYSVPGSRYLNYRNAIKELLSREIRQFRDAFTLVGDDFDSPENIGYLENIVCIID QLQTNEWSTIMKKCIHICFLASNQDHVFHTFNLNKYFFEGNTPASGKLNWRNLKSFIISL PEIKTAPWRNIFSSFKLKCIALLDKEIAKVEVDQDFTRILAREDLRQSFFNFF NT seq 6822 nt NT seq  +upstreamnt  +downstreamnt atgaatgaaactctggaagacgacctgaaagctctggaaggacgactcaaaggtgtaaga gaaacgtccgatggcaaagaactatttacagcaattctagtccgaaggcatgactacttt ggtcatgaactctgtaaagcaatggacataccatacagaaatgacgtaaaactagtggac atcctgcatgagtgtttccatgacattgacactggcgatattgtcattcccaatataaca ccagacaatttcatttatgacggtgaaatcctaactattttggactataaagtctctgtc tctttagaaagtactgaacacacaatagacaagtacaccaaagaattagataaaataaga catttcttgccatcaagagttgaattatgcataatcagatgccaccctaggacaaccaag ttaaccttcacaaatgacaggataaagagaatgtatgctaatattcaactagaacttaac tttgaacctttcgagaatctaataaccgagttaaaagatagatttagagatagtgatgaa tttcttgcgatgattgctcatggagatgtgacgttaactgtaaagtggtgccagactgga tgtccagaattgcgacagcatccgattttcaacgagttttatgaaagccttgatgaagaa tacaaagaaatgtttgataggtcgatggaattttctgcatattcagctgaaaaatggaat cagaatttgataagaatacgagatcaaacttctgaagactacaaagactttgttaaaaga aattcttctgaacttttccaaactgatggaaattatccagagcctagcagggaagagata ctagctggttgggatgagatgtctgaacgaatacaacagactaggcaggtgtctaaagat gtcaatgatcaaaaaccaagcatccacttcatatggagtgagcataacccaggactgccc acacattcaactcacaaattaatgatgatatcaaagctattacagaatatatctagcaat agtgactatgctgatgatttcagacaaataggcaaactcatggacataggtgacaatgtt ttagcatatgagaatcattgtgaatcgctaaaattagaagcaagaaaaaacctaaagcca atacaaaacagaaagttaaatccaaaaaggatcggcaatgcacaagttctctgggaacaa caatttttaatgtctgctgaagatatgggtaaagctagaaaagtgcatctgcttaaagag tatttcggaataggcagacataaggattttagccataaaacgaatacagacattaacatg gacaaaccaaaaattttggatttcaatgaccctgatataataagaatgagtcaaataatg atggagaaaacttcaggtattctgtcacagcaaacaacactcaagcctaaccatgccatt gtagatgaatatatggacaatataaaggaggcaaatgagaacacgtataaaactataaaa caaatattgtcaaccaagtactggtcatgcatatctgacatttcaatgttaatgaaaaac atattgtctgtagctcaatacaaccgctcccacacgtttagactagccatgtgtgctaac aattctttatatgcattagttctaccttctgctgacatcaaaagtaggaagtcaacagtg gttttctgtataatagctttgcatacagaagaagaagctgtttttaacccagggtgcttg cattcaacttataaaacattcacaagtgacaaaactggttggttgtctatttccaaggct attcgtcttgataaagaaagatgccaaagaattgtgacaagtccaggtttattcctttca acagtgactttacttaaacaggacaacaattcaattgacctcaatgatgtaatgaatttt gctctgtttacaagcttgaatgtaacaaagagtatgttgtctttaacagagccttctaga tatatgataatgaattctttggcagtgtctagtcatgtgaaagaatacatatctgaaaaa ttcaatccttacacaaagactcttttcagtgtttacatgtgtaacaagataaagacaggt tgtctgaatgcatttaatcaaagacaaaaaataaaacttagagacatcttcttgacagac tttgatataacacagaagggaatatctgacagcagagatttgacaagcatatggtttcca ggatttgtaacactgaaagaatacttgaaccaaatatttctggtcttctatttgaatcca aagggcctacatgagaaacatcatgtcatgattgacctattaaagacagtaatagagata gaattggatcaaagaaacaacattcctgtaccatggtcagaaactccaaagaaacaaaca gtcaatttacctatatttctgaactctgtagctatcaatttgatgcatgacactgcttat tgtacacacctacggtcaaggatagaaaacagaaacaatctcagacgttcattttctaca atttcaacatttacaagtagtaaaagttgcataaaggttggagacttttctagcatcaaa accgagataaataggaaaatagaaaaagctcggaagtcagaggaaaaaagaagtagaatt gcaaatccggatttcatacatgatgaggaatacaagaatgttgttgaacactgcaactat gatatgatgaggaaagcaataccagattatacagaccacatctcaacaaaagtttttgac agactgtacgaattgcaaaagaacagggtcatcactgatgaaccagttgtagggcagatt ttagacatgatggtcaatcacaaacaattctacttttccttttttaacaaaggtcaaaaa acagcaaaggacagagaaatcttcgttggagaatatgaagccaagatgtgcatgtatctg gtggagagaatattcaaagaacggtcaaaagtaaacccagatgagatgataagtgagcct ggggatggtaaattaaaagttttagaacgtaaagcagaacaggaaattaggtaccttata gaaagaataaaacagaggaattcaccgatcatggaagaaatagaaaatctgaaagagagt gttctctttgataagagtaaactggaggacttggtaaacagcaaataccatggcctgaag ctagaaattaatgcagacatgtcaaaatggagtgcacaagatgtattctttaaatatttt tgggtcatagcaatggatcctatactataccctgaagagaaggaacggattattttcttt ttttgcaactacatgaacaaaagattgataatcccagacgaagtcatatatactatctta gatcaacagataccatacaaaaatgacatggtcatgcaggtaacaaatggtctacattct aacacttttaatgtaaaaagaaattggctacagggaaacttcaattacatgtctagctat gtccacagttgtgccatgtcagtatataaggacattctccgtgccgctgctaagaggata gaagcagacatcttagtcaattccatggttcattctgatgacaaccaaactgcaatatgt ctgataaacaataggttggataccagagtgtttacaaaatttgcaatccaattatttgag aaaatatgtctgacatttggttgccaagctaatatgaagaaaacatatgtaactaatcac ataaaagaatttgtatcactcttcaatctgtacggagaaccattttcagtctatggcaga tttacattaactgcagttggagattgcgcttacataggcccatacgaagatctagctagt agaatttcttcaacacaaacagcagtgaaacatgggtgccctgcaagtttggcttggctt tccatttccattagtcattggataacttatctaacttacaatatgcttccggggcaaatc aatgacccatctatgtcactgggaattgacaacaggcgagaaatcccgatagaactagga ggttatctagaagcagacctatcaatgattgcactagctggattggaatctggaaatata cagttcttgattaacttgttgacaaaaatggtgaacccgatcttattccgcgaggatgta gtgtcacaatgttctgatataaagaactgggatttagcaaaattgacattttcagaagtt ttcaggctaaaggtcttgagatttcttgcacttgatgcagaaatggattgctctgacaca atgggagagactggagagatgcgcagcagatccctgttgacacccaggaagtttacaact gctggatcactcaggaagttagtttcttttggagattttcagtcttgtcagtctgaacca gaagggatcaacactgttgttgagtatatgcttgagcatccagaactgttagtaactaaa ggtgaaactgtagaagattacagaaacatcgtcttatatagatacaactcaaagagattc aaagagtctctatctattcagaatccggcgcaattgtttctagagcagatactgttttct cacaaaccaataatagattacactgggatccaagagaaatatctaaatttgtcagacagc actgttacagaagaccagccggaaatattaggcagagtaactttcccagaggcttttagg aaaattagagaagacctatcaacattgaaattgactattaatgatgtacaaacagtttat gattttgttattctaaatgacccaatgataattgcaatagctaatgcacatcttctatct aaccaaggtgcaatgcaagacagattgggttcatcatgtagcacaatgccagaattcaga aaccttagactgataacgcattcacctgccctagtactcaggtcctatagtactgggaga tacgatgtgccaggtgcagatcctgatgaaatgagaagggacagaacacatctacaagaa ttcatagacaatacaaagctcttgttaaaaatggaacagagaatagaacagaacgaaaaa gcaaaaggcactagagacatactatttgaaattaaagaaatcacgaaattttatcaagtc tgttacgaatacatcaagtctacagaacacaaagttaaagtttatattttgccggtaaag tgttacacaacaactgatttctgtgcagcaatacaagggtcattgatcaaggataaacaa tgggctataattcaacacatacatccagtttcagcaggtggacacaagggcattgttcaa aaacatacaacaaatgagatcaagcttgctgaagactgcatgagacttattgcatttttc attgacacttttatagatgaaaattatagaatatatatgtttaggagaatgattgatgag ttttcatactcaggtaggaaggtttcagacttgctagacataattgcaacatcaaagaat cgagttgattttctgccaatcctttatcgatccgggttattggaacaaaaagacttggat agttatgacgctttaaagtcaagtggaagacctacatggaacaaatggcagacaaccagg gctttagatatggggaagatagatctaagcatagacacccatagaagctctatccggatc attggagaagaccgaaatttgcattatgcagaattgtatctcccatcaataaattacgat tcaattacacggagtggctataaactgctaaatgccaaacatggtttaaaattccaatct atgtctgaagtcagtgtgagaaaagatgaatggtatatcacctatcaaaggaagtccaga gacaattatgtttacaagatattttatggtaagaagctgctgaatccattacctgagcat gacctacgctacaataggacaacaaatcctatagtaccagtctgtcatgtaatacccatg ataagaccagacattgatcgaattatacttgaagatatggatagtctgaacatcgaaaat tttaagatcggggttttgaacacaggtgttggagaacaagccagacttagaagatgtatg ttacataagatgaaaaactttgaaggccctgatataaaaagcagagttataaatttaacc aaactaatgaaagacaataccttaatgagcttgaattatgataatgtctgcaatgttcat ttgtcacaattctgcaaacttcttgattgcaacggaaatgaaggtacattagacgatgca atgtacagcttttcagatgaacccatggagcaaacacaagttgatgaagtggagtgtacc cctatttttaaagtgcaatacagtgttccaggaagtcggtatttaaattataggaatgca ataaaagaactactgtccagagaaataagacaattcagagatgctttcacactagttgga gacgactttgattcaccagagaatattggttacttagaaaacattgtttgcataattgat caactccagaccaacgaatggtcaacaataatgaaaaagtgtatacacatatgttttcta gcatcaaatcaggatcatgtttttcacacattcaacctaaataaatacttttttgaggga aacactccagcatctggtaaattgaactggaggaatctaaagagctttattataagtctg ccagaaattaaaacggctccttggagaaatatcttcagctcttttaaactaaaatgtata gcattgttagacaaagaaattgcaaaagttgaagtagaccaagactttacaaggatacta gcacgtgaagacctcagacagagcttctttaactttttctaa

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