Viruses: 9538294
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Entry
9538294 CDS
T40000
Symbol
RVFV_sL_gp1
Name
(RefSeq) Rift Valley fever virus; polymerase
Virus
11588
Rift Valley fever virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
Bunya_RdRp
L_PA-C-like
L_protein_N
Motif
Other DBs
NCBI-GeneID:
9538294
NCBI-ProteinID:
YP_003848704
RS:
NC_014397
UniProt:
A2SZS1
LinkDB
All DBs
Position
NC_014397:19..6297
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AA seq
2092 aa
AA seq
DB search
MDSILSKQLVDKTGFVRVPIKHFDCTMLTLALPTFDVSKMVDRITIDFNLDDIQGASEIG
STLLPSMSIDVEDMANFVHDFTFGHLADKTDRLLMREFPMMNDGFDHLSPDMIIKTTSGM
YNIVEFTTFRGDERGAFQAAMTKLAKYEVPCENRSQGRTVVLYVVSAYRHGVWSNLELED
SEAEEMVYRYRLALSVMDELRTLFPELSSTDEELGKTERELLAMVSSIQINWSVTESVFP
PFSREMFDRFRSSPPDSEYITRIVSRCLINSQEKLINSSFFAEGNDKALRFSKNAEECSL
AVERALNQYRAEDNLRDLNDHKSTIQLPPWLSYHDVDGKDLCPLQGLDVRGDHPMCNLWR
EVVTSANLEEIERMHDDAAAELEFALSGVKDRPDERNRYHRVHLNMGSDDSVYIAALGVN
GKKHKADTLVQQMRDRSKQPFSPDHDVDHISEFLSACSSDLWATDEDLYSPLSCDKELRL
AAQRIHQPSLSERGFNEIITEHYKFMGSRIGSWCQMVSLIGAELSASVKQHVKPNYFVIK
RLLGSGIFLLIKPTSSKSHIFVSFAIKRSCWAFDLSTSRVFKPYIDAGDLLVTDFVSYKL
SKLTNLCKCVSLMESSFSFWAEAFGIPSWNFVGDLFRSSDSAAMDASYMGKLSLLTLLED
KAATEELQTIARYIIMEGFVSPPEIPKPHKMTSKFPKVLRSELQVYLLNCLCRTIQRIAG
EPFILKKKDGSISWGGMFNPFSGRPLLDMQPLISCCYNGYFKNKEEETEPSSLSGMYKKI
IELEHLRPQSDAFLGYKDPELPRMHEFSVSYLKEACNHAKLVLRSLYGQNFMEQIDNQII
RELSGLTLERLATLKATSNFNENWYVYKDVADKNYTRDKLLVKMSKYASEGKSLAIQKFE
DCMRQIESQGCMHICLFKKQQHGGLREIYVMGAEERIVQSVVETIARSIGKFFASDTLCN
PPNKVKIPETHGIRARKQCKGPVWTCATSDDARKWNQGHFVTKFALMLCEFTSPKWWPLI
IRGCSMFTRKRMMMNLNYLKILDGHRELDIRDDFVMDLFKAYHGEAEVPWAFKGKTYLET
TTGMMQGILHYTSSLLHTIHQEYIRSLSFKIFNLKVAPEMSKSLVCDMMQGSDDSSMLIS
FPADDEKVLTRCKVAAAICFRMKKELGVYLAIYPSEKSTANTDFVMEYNSEFYFHTQHVR
PTIRWIAACCSLPEVETLVARQEEASNLMTSVTEGGGSFSLAAMIQQAQCTLHYMLMGMG
VSELFLEYKKAVLKWNDPGLGFFLLDNPYACGLGGFRFNLFKAITRTDLQKLYAFFMKKV
KGSAARDWADEDVTIPETCSVSPGGALILSSSLKWGSRKKFQKLRDRLNIPENWIELINE
NPEVLYRAPRTGPEILLRIAEKVHSPGVVSSLSSGNAVCKVMASAVYFLSATIFEDTGRP
EFNFLEDSKYSLLQKMAAYSGFHGFNDMEPEDILFLFPNIEELESLDSIVYNKGEIDIIP
RVNIRDATQTRVTIFNEQKTLRTSPEKLVSDKWFGTQKSRIGKTTFLAEWEKLKKIVKWL
EDTPEATLAHTPLNNHIQVRNFFARMESKPRTVRITGAPVKKRSGVSKIAMVIRDNFSRM
GHLRGVEDLAGFTRSVSAEILKHFLFCILQGPYSESYKLQLIYRVLSSVSNVEIKESDGK
TKTNLIGILQRFLDGDHVVPIIEEMGAGTVGGFIKRQQSKVVQNKVVYYGVGIWRGFMDG
YQVHLEIENDIGQPPRLRNVTTNCQSSPWDLSIPIRQWAEDMGVTNNQDYSSKSSRGARY
WMHSFRMQGPSKPFGCPVYIIKGDMSDVIRLRKEEVEMKVRGSTLNLYTKHHSHQDLHIL
SYTASDNDLSPGIFKSISDEGVAQALQLFEREPSNCWVRCESVAPKFISAILEICEGKRQ
IKGINRTRLSEIVRICSESSLRSKVGSMFSFVANVEEAHDVDYDALMDLMIEDAKNNAFS
HVVDCIELDVSGPYEMESFDTSDVNLFGPAHYKDISSLSMIAHPLMDKFVDYAISKMGRA
SVRKVLETGRCSSKDYDLSKVLFRTLQRPEESIRIDDLELYEETDVADDMLG
NT seq
6279 nt
NT seq
+upstream
nt +downstream
nt
atggattctatattatcaaaacagctggttgacaagactggttttgttagagtgccaatc
aagcattttgactgtacaatgctaactctggcacttccaacatttgatgtttccaagatg
gtagatagaattaccatagacttcaatctggatgatatacaaggagcatctgaaataggc
tcaactttgctaccctccatgtcgatagatgtggaagatatggccaattttgttcacgat
ttcacctttggccacttagctgacaagactgacagactgttaatgcgtgagtttcccatg
atgaatgacgggtttgatcatttgagccctgacatgatcattaaaactacatctggcatg
tacaacatcgttgagttcaccacctttaggggagatgaaagaggtgcattccaggctgcc
atgactaaactcgctaagtatgaggttccttgtgagaacagatctcagggcaggactgtt
gttctttatgttgttagtgcttatcggcatggtgtatggtctaatctggagctagaggac
tctgaagcagaggagatggtttataggtacagacttgctcttagtgtgatggatgagcta
aggaccttgttcccagaactgtcatccacagatgaggaactagggaagactgagagagag
ttgctagccatggtctcctccatccaaataaattggtcagtcacagaatctgtgtttcca
cccttcagcagagaaatgtttgacaggtttagatcctcccctcccgattcagagtatatc
acgaggatagtgagcagatgcctaataaattctcaagagaaactcatcaatagttccttc
tttgctgaagggaatgataaggctctgagattttcaaaaaacgctgaagagtgttccttg
gcagtagagagagccttaaatcagtatagagcagaagacaaccttagggacctcaatgac
cacaagtcaactattcagctgcctccctggctgtcctatcatgatgtcgatggcaaagat
ctgtgccctcttcagggactagatgtgagaggggaccatcccatgtgcaacttgtggagg
gaagtggtcacctctgcaaacctagaggagattgagaggatgcacgatgatgcagcagca
gaacttgagtttgccctttcgggagtaaaggacaggccagatgagagaaacagataccat
agagtccacctaaatatgggctcagatgatagtgtctacatagctgctttaggagttaat
ggaaagaagcataaagcagacactttagtgcaacaaatgagagacaggagtaaacagcct
ttctccccagaccacgatgtggatcacatatctgaatttctctctgcatgctctagtgac
ttgtgggcaacagatgaggacctgtacagccctctctcttgtgataaagagcttagattg
gcagcccagaggattcatcagccatccttgtcagaaaggggtttcaatgagatcataaca
gagcactacaaattcatgggaagtaggataggttcatggtgccaaatggtcagcttgata
ggagctgagctatcagcttctgttaaacaacatgtcaagcctaactactttgtgattaaa
cgactactaggttctgggattttcttgctaatcaagcccacttccagcaaaagccatata
tttgtgtcttttgcaattaagcgctcttgctgggcctttgatctctccacttccagggtt
ttcaagccctacatagatgctggggatctgttagttactgactttgtttcttataagcta
agcaagcttaccaacctctgcaagtgcgtttcattaatggagtcctccttctcattctgg
gcagaagcatttggaattccaagctggaactttgttggtgacttgttcaggtcttcagac
tctgcagcaatggatgcctcatacatgggcaaactttctttattaacccttttggaagac
aaagcagcaactgaagagttacagactattgcaagatatataatcatggagggctttgtc
tcgcccccagaaatcccaaaacctcacaagatgacctctaagtttcctaaggttctcagg
tcagagctgcaggtttacttattaaactgcttatgcagaactatccagagaatagcaggt
gagcccttcattcttaagaagaaggatgggtctatatcctggggtggcatgttcaatcct
ttttcagggcgtccactgcttgatatgcaaccactcatcagctgttgttacaatggttac
tttaaaaataaagaagaagagactgagccttcgtccctttctgggatgtataagaaaatc
atagaacttgagcaccttagaccacagtcagatgccttcttgggttacaaagatccagaa
cttcccagaatgcatgagttcagtgtttcctacttgaaggaggcttgcaatcatgctaag
ctagtcttgaggagcctctatggacagaatttcatggagcagatagacaaccagattatt
cgagagctcagtgggttgactctagaaaggttggccacacttaaggccacaagcaacttt
aatgagaattggtatgtctataaggatgtagcagacaaaaactacacaagggataaatta
ttagtgaagatgtcaaaatatgcctctgagggaaagagcctagctatccagaagtttgag
gattgtatgaggcagatagagtcacaaggatgcatgcatatttgtttgtttaagaaacaa
cagcatggaggtctgagagagatctatgtgatgggtgcagaggaaagaattgttcaatcg
gtggtggagacaatagccaggtccatagggaagttctttgcttctgataccctctgtaac
ccccccaataaagtgaaaattcctgagacacatggcatcagggcccggaagcaatgtaag
gggcctgtgtggacttgtgcaacatcagatgatgcaaggaagtggaaccaaggccatttt
gttacaaagtttgccctcatgctgtgtgagttcacctctcctaaatggtggccgctgatc
attaggggatgctcaatgtttaccaggaaaaggatgatgatgaatttgaattatcttaag
atcctggatggtcatcgggagcttgatattagagatgactttgtgatggatctcttcaaa
gcttatcatggcgaggcagaagttccatgggcctttaaaggcaaaacatatttggaaacc
acaacagggatgatgcagggaatactgcattatacttcctcactattacacaccattcac
caagaatacatccggtccttgtcctttaagatattcaacctgaaggttgctcctgagatg
agcaagagcctggtttgtgacatgatgcaaggatcagatgatagtagtatgctaatcagc
ttcccagctgatgatgagaaggttcttaccagatgcaaagtggccgcagctatatgcttc
cgcatgaagaaggagctgggagtgtaccttgccatttacccctcagagaagtccacagca
aacacagattttgtgatggagtacaattctgaattttatttccacacccagcatgttaga
ccaacgatcaggtggattgcagcttgttgcagcctgccagaagtggaaacactagtagcc
cgccaggaagaggcctctaacctaatgacttcagttactgagggaggtgggtcattctcc
ttagctgcaatgattcagcaagctcagtgtactctccattacatgctgatgggcatggga
gtgtctgagctattcttagagtataagaaggcagtgctgaagtggaatgaccctggcctg
ggtttcttcctgcttgacaatccttatgcgtgcggattgggaggtttcagatttaatctc
ttcaaagctatcaccagaactgatttgcagaagctatatgctttcttcatgaagaaggtc
aagggctcagctgctagggactgggcagatgaagatgtcaccatcccagaaacgtgtagc
gtgagcccaggtggcgctctaattcttagctcctctctaaagtggggatctaggaagaag
tttcagaaattgagagaccgtttgaacataccagagaactggattgaactaataaatgag
aatccagaggtgctctatcgggctcccagaacaggcccagaaatattgttgcgcattgca
gagaaagtccatagcccaggtgttgtgtcatcattgtcttctggcaatgcagtttgtaaa
gtcatggcctcagctgtatacttcttatcagcaacaatttttgaggacactggacgtcct
gagttcaacttcttggaggattctaagtacagcttgctacaaaagatggctgcatattct
ggctttcatggtttcaatgatatggagccagaagatatattattcttattcccgaatatt
gaggaattagaatcactggattctatagtttacaacaagggagaaatagacatcatccca
agagtcaacatcagggatgcaacccaaaccagggtcactatctttaatgagcagaagacc
ctccggacatctccagagaagttggtgtcagacaagtggtttgggactcagaagagtagg
ataggcaaaacaaccttcctggctgaatgggaaaagctaaagaaaattgtaaagtggttg
gaagacactccagaagcaactctagctcacaccccactgaataaccatattcaagttagg
aatttctttgctagaatggaaagcaagcctagaacagtcagaataacaggagctccagta
aagaagaggtcaggggttagtaagatagctatggttatccgtgacaatttctcccggatg
ggccatcttcgaggtgtagaagaccttgctggcttcactcgtagtgtgtcagctgaaatt
ctcaagcactttctattctgtatactacaaggtccatacagtgagagctataagctacag
ctaatctacagagtcctaagctcagtgtcaaacgttgagataaaggaatcagatggtaag
acaaaaaccaacttgattggaatccttcagagatttctagatggtgatcacgttgtcccc
ataattgaagagatgggagccggaacagtgggtggattcatcaagagacaacaatctaaa
gttgtgcagaacaaagtggtctattatggagttgggatttggagaggcttcatggatgga
tatcaggtccatctagagatagaaaatgacataggacagcccccaaggcttaggaatgtc
acaactaactgtcagagcagcccatgggacctgagtattccaataaggcaatgggcagaa
gacatgggggtcacaaacaaccaggattattcctctaaatctagcaggggggccagatat
tggatgcattcattcaggatgcaaggacctagcaagccatttggatgcccagtttatatt
attaagggtgatatgtcagatgtcatcagactgagaaaggaggaggtggagatgaaagta
cggggctctactctcaacttgtacaccaagcaccattctcatcaggacctacacattcta
tcttacactgcatcagacaatgatctcagtccaggcattttcaagtcaatatcagatgag
ggggtggctcaagccctgcaattatttgagagggagccaagcaactgctgggtgagatgt
gagtctgtagccccaaaatttatatcagccatccttgagatatgtgaggggaagagacag
ataaagggaattaacagaaccagactctcagagattgtgagaatttgttctgaatcttcc
ctaagatcaaaagtcggatctatgttctcatttgtcgccaatgtcgaggaggcccatgat
gttgattatgatgcgttaatggatctaatgatagaggatgccaagaacaatgcattcagt
catgttgttgactgcatagagttggatgttagtggcccttacgagatggagtcttttgat
acatctgatgtcaatctctttgggccagcccattacaaggacatcagttcattatctatg
attgctcatcccttaatggataagtttgttgattatgctatttctaagatggggagagcc
tcagttaggaaagttctagaaacaggtcggtgctccagcaaagactatgatttatcaaag
gttctcttcagaactctacagagaccagaagaaagcattaggatagatgatctggaatta
tatgaggagacagatgtggcggatgacatgctaggctaa
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integrated database retrieval system
