Vibrio gigantis: MID13_12050
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Entry
MID13_12050 CDS
T08202
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00730
Thiamine metabolism
vgi01100
Metabolic pathways
vgi01240
Biosynthesis of cofactors
vgi04122
Sulfur relay system
Module
vgi_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MID13_12050 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
MID13_12050 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vgi03016
]
MID13_12050 (thiI)
Enzymes [BR:
vgi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
MID13_12050 (thiI)
Transfer RNA biogenesis [BR:
vgi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MID13_12050 (thiI)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
NAD_synthase
SmaI
Y_phosphatase3
Motif
Other DBs
NCBI-ProteinID:
ULN63652
LinkDB
All DBs
Position
1:complement(2706796..2708244)
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AA seq
482 aa
AA seq
DB search
MKFIVKPHPEIFVKSESVRKRFTRILECNIRNVIQRHCESVAVFNRRDHIEVTSESDQYY
AEVLEALTHTPGIHHSLEVQQSEFKDLHDIYEQVLERSRADIEGKTFSVRAKRRGKHDFT
SIELERYVGGGLNQAVESAKVRLKNPDVTVKVEVANDKLNQVLARHKGLGGFPLGTQEDL
LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQVAHYLWNKYGSSAKVKFI
SVDFEPVVAEILENVEDGQMGVVLKRMFMRAGGMVAERFGIEALVTGEALGQVSSQTLTN
LRHIDNVTDTLILRPLINWDKEDIIDLSRIIGTEDFAKVMPEYCGVISKKPTVKAKKGKL
EAEEAKFNFEVLDQVIENARVMDIRDIEKESQEQAPEVEQVQAVAEHAIVLDIRSPEEED
ESPLEIDGVEIKHIPFFKLSTQFGDLDQAKEYLLYCDRGVMSRLQALYLQEQGFHNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgttaagccccatccggaaatttttgtaaaaagtgaatcggtgcgtaag
cgcttcacaaggattctagagtgcaacattcgcaacgttattcaacgtcactgtgaaagt
gttgcggtgttcaaccgtcgtgaccatatcgaagtgacctctgagagtgaccagtactac
gcagaagtgttagaggctctgactcacactccaggtatccatcactctcttgaagttcaa
cagtctgaattcaaagacttgcacgatatttacgagcaagtactagaacgcagccgtgct
gacattgaaggcaagactttctctgttcgtgctaagcgccgtggtaagcatgactttacg
tctatcgagctagagcgctacgtaggtggcggtctgaaccaagccgttgagtcagctaaa
gttcgactaaagaaccctgatgtgaccgttaaggttgaagtcgctaacgacaaacttaac
caagtactggctcgtcataaaggccttggtggtttccctcttggtactcaagaagaccta
ctaagcttgatctctggtggtttcgactctggcgtttcaagctacctgcacatcaaacgt
ggttctaaggttcactactgtttcttcaatcttggtggccctgcgcacgagattggcgtt
aagcaagtggctcactacctatggaacaaatacggttcttcagcaaaagtgaagttcatc
tctgtagacttcgaacctgttgttgctgagatccttgagaacgtagaagacggccaaatg
ggcgttgttcttaagcgtatgttcatgcgtgctggtggtatggttgcagagcgttttggt
attgaagcgctagtaactggtgaagcacttggtcaggtttctagccaaacgctaactaac
ctacgccacatcgacaacgtgactgatactttgattcttcgtccgttgatcaactgggat
aaagaagacatcatcgatctttctcgcatcatcggtactgaagacttcgctaaggtaatg
cctgagtactgtggcgttatttctaagaagccaacagtgaaagcgaagaaaggcaaactg
gaagcagaagaagctaagtttaactttgaagtgcttgatcaagtgatcgagaatgctcgt
gttatggatatccgtgatatcgagaaagagagccaagagcaagcacctgaagttgaacaa
gttcaagctgttgctgagcatgctatcgttcttgatatccgtagcccagaagaagaagac
gaaagcccactagagatcgatggtgttgaaattaaacacatcccgttcttcaagctttcg
actcagtttggtgacctagaccaagctaaagagtatttgctgtactgcgaccgtggtgta
atgagtcgtctacaggcgctttacctacaagagcaaggcttccataacgttaaggtttat
cgcccatag
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