Variibacter gotjawalensis: GJW-30_1_00057
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Entry
GJW-30_1_00057 CDS
T05320
Symbol
hsdM
Name
(GenBank) type I restriction enzyme EcoKI M protein
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
vgo02048
]
GJW-30_1_00057 (hsdM)
Enzymes [BR:
vgo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
GJW-30_1_00057 (hsdM)
Prokaryotic defense system [BR:
vgo02048
]
Restriction and modification system (R-M system)
Type I R-M system
GJW-30_1_00057 (hsdM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
UPF0020
TPR_22
Motif
Other DBs
NCBI-ProteinID:
BAT57551
UniProt:
A0A0S3PNQ3
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Position
59510..61042
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AA seq
510 aa
AA seq
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MTSTTDIVAKLWGLCNVLRDDGVTYNEYVTELTYLLFLKMLAEVPDQSGNLRENRLPGDY
RWGILAKREGMDQLDYYKKMLLDLGKAKDKLVSAIFTDAQTRLRKPTNLKALTSNIDQLD
WFSAREEGLGNLYEGLLEKNASDKKSGAGQYFTPRPLIDCIVRLMQPRAGETIQDPAAGT
AGFLVAADRYIKDQTDDLYKLAPDKAHFQRSSAFVGAELVPDTHRLCMMNLLLHGIEGGV
DNVDTLSPDGERLAKADLLLTNPPFGAKKGGGRPTRTDFSVTADTSNKQLAFVEHIVRAL
KPGGRAAVIVPDNVLFEDNAGRRLRSWLMDLCDLHTILRLPTGIFYAQGVKTNVLFFRRG
KTDKASTNAVWVYDMRANMPAFGKTRPLAVADFADFEAVYGSDPNGAAARKDQGEQEAGS
SAGATGIGKEVRWRMFSRDAITARNDNLDIAWLRDTEAEAEEALTEPEDIAAAIIGHLRA
ALDEIEALSEEIEPPDSLNTEATVVADAAE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcacaaccgacattgttgcgaagctctgggggctatgcaacgtcctacgcgac
gatggcgtcacctacaacgagtacgtcaccgagctcacctacctgctattcttgaaaatg
ctggccgaagtcccggatcagagcggcaacctaagagaaaaccgcttacccggcgactac
cgttggggcatcctcgctaagcgcgagggcatggatcagctcgactattacaagaagatg
ttgctggacctcggcaaggcgaaagacaagctcgtcagcgcgatttttacggatgcacag
acgcggctccgcaagccaaccaacctaaaggcgctgacctcgaatatcgatcagctcgat
tggttctcggcacgcgaagagggtctcggcaatctgtacgaaggcctcttggagaagaat
gcttctgataagaaatctggtgcggggcagtacttcacgccgcgaccgctgatcgactgc
attgtccgattgatgcaaccaagagccggagaaacgatccaggacccggcagcgggtacg
gccggctttctcgtcgcggcggatcgctacatcaaggatcagaccgacgacctctacaag
ctcgccccggacaaggcgcacttccagcgcagtagcgccttcgtgggtgcggagctggtg
ccagatacacaccggctctgtatgatgaacctgttgctgcacggcatcgagggtggcgtc
gacaacgtcgacacgctctctccggatggcgaacgtctcgcgaaagctgacttgctgcta
accaatcccccgtttggtgccaagaaaggtggcggtcgcccgacacgaacagacttttcg
gtcacggccgatacttcgaacaaacaactcgccttcgtcgaacatattgtccgcgcactt
aagccgggcggtcgcgctgccgtcatcgtgcctgacaacgttctgttcgaagacaacgct
gggcgacgcttacgctcatggctgatggacctctgcgacctgcacacgatcctacgattg
cctactggtatcttctatgcgcaaggcgtcaaaaccaatgtgctgttttttcggcgtggc
aaaaccgacaaggcaagcacgaacgccgtgtgggtatacgatatgcgcgccaatatgccg
gcgttcggcaagacgcgtccgctcgccgtcgcagacttcgctgacttcgaggccgtttac
ggctctgatccgaacggcgcagccgcgcggaaggatcagggcgagcaggaggcggggagt
tccgcaggcgcgactgggattggaaaggaggtccgctggcgcatgttcagccgcgatgcg
atcaccgcccgcaacgacaacctcgacattgcgtggctccgcgacacagaggctgaggcc
gaggaggcgctgaccgagccggaagacattgcggctgcgatcatagggcatctcagggct
gcgctagatgagatcgaagcactctcagaagagatagagccgcccgatagtctcaatacc
gaggccacggtcgttgcggatgcggcagaatga
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