Variibacter gotjawalensis: GJW-30_1_01571
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Entry
GJW-30_1_01571 CDS
T05320
Symbol
rsmD
Name
(GenBank) ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vgo03009
]
GJW-30_1_01571 (rsmD)
Enzymes [BR:
vgo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
GJW-30_1_01571 (rsmD)
Ribosome biogenesis [BR:
vgo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GJW-30_1_01571 (rsmD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
UPF0020
Methyltransf_25
Methyltransf_16
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
BAT59042
UniProt:
A0A0S3PT14
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All DBs
Position
1622262..1622825
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AA seq
187 aa
AA seq
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MRIVGGVMRGRALAAPKSQDVRPTADRLRESVFNILMHGYGDPITGARVLDLFAGTGALG
LEAISRGAAFALFVDDGSEARALQRQNVDTLSVGGATRIFRRDATTLGPAHPIEPFGLVF
CDPPYGKGFAEKSLASARAGGWLTPDALVVVEEAKGAFVAPEGFAELERRAYDDTEFTFL
RLGDKSG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgtcggcggcgtgatgcgtggccgcgcgctcgcggccccgaaatcgcaagac
gtgcggccgacggccgatcgtctgcgcgagagtgtgttcaacattctgatgcacggctac
ggcgatccgatcaccggcgcgcgcgtgctcgatctctttgccggcaccggtgcgctcggc
ctcgaagcgatttcgcgcggcgccgccttcgcgttgttcgttgacgacggttcggaggcg
cgcgcgttgcagcgacagaatgtcgatacgctcagcgtcggcggtgcgacgcgcatcttc
cgccgcgacgcgacgacacttggccccgcacacccgatcgaaccgttcggtctcgtcttc
tgcgatccgccttacggtaaaggcttcgccgagaaatcgctcgcgagcgcgcgcgcgggc
ggatggctgacgcctgacgcgttggttgtcgtcgaggaggcgaagggcgcattcgtcgct
ccggaaggttttgcggagcttgaacgccgcgcctacgacgataccgagttcacctttttg
cggcttggggacaagagtggataa
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