Variibacter gotjawalensis: GJW-30_1_03169
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Entry
GJW-30_1_03169 CDS
T05320
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vgo
Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vgo03009
]
GJW-30_1_03169 (rimO)
Enzymes [BR:
vgo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GJW-30_1_03169 (rimO)
Ribosome biogenesis [BR:
vgo03009
]
Prokaryotic type
ribosomal protein modification factors
GJW-30_1_03169 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BAT60621
UniProt:
A0A0S3PXH6
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All DBs
Position
3251009..3252334
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AA seq
441 aa
AA seq
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MTSPATAPKISFVSLGCPKALVDSERIITRLRAEGYELARSHDGADLVVVNTCGFLDSAQ
AESLDAIGKALNENGKVVVTGCMGAEPEKITDKFPNVFAITGPQQYESVLDAVHRAAPPL
HNPFLDLVPEQGIKLTPRHYAYLKISEGCNNTCTFCIIPKLRGKLVSRPAADVLREAEKL
VAAGVKELLVISQDTSAYGIDLRYAASTYKNQEISARFLDLSRALGDLGAWVRLHYVYPY
PHVDDVIPLMAEGKVLPYLDIPFQHGSPSVLKRMRRPGNQEKTLERVKSWREICPDLTLR
STFIVGFPGETEEEFQTLLDWISEAEIDRAGCFRYEPVAGATSNGIAEEVPAEVKEERWH
RFMAAQQKVSARRLKKKVGKRLDVIIDEVGPTVSKGRSKGDAPEIDGAVYVASRRPLRVG
EIVKAKIERADEYDLHGTVGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccctgccacggctcccaaaatctcttttgtttccctcggttgccccaaggct
ttggtggattccgagaggatcatcacgcgcctacgcgccgaggggtacgagcttgcccgc
agccacgacggagccgaccttgtcgtcgtaaatacgtgtgggtttctcgatagcgcgcag
gccgagagcctcgatgccatcggcaaggctctcaacgagaacggcaaggtcgtggtcacc
ggctgcatgggcgccgaacccgagaagatcaccgacaaattccccaacgtcttcgccatc
acgggaccccagcagtacgagagcgtgctcgacgcggtccaccgcgcggccccgcctctg
cacaatccattcctcgatttggtgccggagcaaggcatcaagctgacccctcgccactac
gcttacctcaagatttcagagggttgcaacaacacgtgcacgttctgcatcatcccgaag
ctgcgcggaaagctggtctcgcgccctgccgctgacgtcctgcgcgaggctgagaagctg
gtcgcggcgggcgtaaaggagctcctcgtcatctcgcaggacacctccgcctacggcatc
gatctgcgctatgcggcttcgacctacaagaaccaggaaatctcggcgcgcttcctcgac
ctaagccgtgcgctcggcgacctcggcgcctgggtccgtctccactacgtctacccctac
ccgcatgtcgacgacgtcatcccgctgatggcggaaggcaaggtgctgccctacctcgac
atcccgtttcagcatggcagccccagcgttctcaaacgcatgcgccgcccgggcaatcaa
gagaagacgcttgagcgcgtcaaatcctggcgcgagatctgcccggacttgacgctccgc
tcgaccttcatcgtcggcttcccgggcgagaccgaggaggaatttcagaccctgctcgac
tggatcagcgaagccgagatcgatcgcgcgggctgcttccgctatgagccggtcgccggc
gcaacctcgaacggcatcgccgaagaggtaccggccgaggtcaaggaagagcgctggcac
cgcttcatggcggcccagcagaaggtgtcggcgcgtcgcctgaagaagaaggtcggcaag
cgcctcgacgttatcatcgacgaggtcgggccgacggtgagcaaggggcgctcgaagggc
gacgcaccggaaatcgacggcgccgtttacgtcgcgtcacgccgcccattacgcgtcggc
gaaatcgtcaaggcgaagatcgagcgcgccgacgaatacgatctgcacgggacggtgggc
ttctag
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