Vibrio campbellii ATCC BAA-1116: VIBHAR_01178
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Entry
VIBHAR_01178 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha00730
Thiamine metabolism
vha01100
Metabolic pathways
vha01240
Biosynthesis of cofactors
vha04122
Sulfur relay system
Module
vha_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VIBHAR_01178
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
VIBHAR_01178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vha03016
]
VIBHAR_01178
Enzymes [BR:
vha01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
VIBHAR_01178
Transfer RNA biogenesis [BR:
vha03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
VIBHAR_01178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
NAD_synthase
PAPS_reduct
Dak2
HTH_Tnp_1_2
Transcrip_reg
Motif
Other DBs
NCBI-ProteinID:
ABU70168
UniProt:
A7MYC5
LinkDB
All DBs
Position
I:1196248..1197696
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AA seq
482 aa
AA seq
DB search
MKFIVKPHPEIFVKSESVRKRFTKILECNIRNIVKSRTESVAVFNRRDHIEVTSESDEFH
AEVLEILTHTPGIRHVLEVKQTEFKDLHDIYEQVLELSGSLIEGKTFAVRAKRRGKHDFT
SIELERYVGGGLNQAVESARVKLSKPDVTINVEVTNDRLNQVLASHKGLGGFPLGTQEDV
LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQVSHYLWNKYGSSAKVRFI
SVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMIAQKMKIEALVTGEALGQVSSQTLTN
LRHIDNVTDTLILRPLINWDKEDIVNLAREIGTEDFAKTMPEYCGVISKKPTVKAVKGKL
EAEEQKFDFSILEQVVQDARMTDIRDIAKESKQAAPEVEQVQAVEEHAIVLDIRSPEEED
DNSLEIDGVEVKHIPFYKLGTQFGDLDQAKTYLLYCDRGVMSRLQALYLQEQGFNNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgtaaagccccatccagaaatttttgtaaaaagtgaatctgtgcgtaag
cgcttcacaaagattttagagtgcaacattcgtaacatcgttaagagccgtacggaatct
gtcgcggtattcaaccgtcgtgatcacattgaagtgacctctgagagtgacgagttccac
gctgaagttttagaaatcctgacgcacacgccaggtattcgccacgtccttgaagtaaag
caaaccgaattcaaagacttgcacgatatttacgagcaggttttagagctaagcggttca
ctgatcgaaggcaagaccttcgctgtgcgcgcaaagcgtcgtggtaaacacgactttact
tctattgagctagagcgttacgtaggtggcggtcttaaccaagccgtagaaagcgctcgc
gttaagctcagcaagccggatgtaacgatcaacgttgaagtaactaacgacaggctaaac
caagtattggcaagtcacaaaggcttaggtggtttcccactaggtacacaagaagacgta
ctcagcctgatctcaggtggttttgattctggtgtttcaagctacctacacatcaaacgt
ggctctaaagtgcattactgtttctttaacctaggtggtccagcgcacgaaatcggtgtt
aagcaggtttctcactacttatggaacaaatacggttcttcagcaaaagtacgtttcatc
tcagttgatttcgaaccggtagtggctgaaatcctggagaaagttgatgacggccaaatg
ggcgtgatactgaagcgtatgttcatgcgtgccgcaggcatgattgctcagaagatgaag
atcgaagcattagtgacaggtgaagcgctaggtcaggtatcaagccaaacactaactaac
ttacgccacatcgataacgtaacagatactcttatcctgcgtccgctaatcaactgggac
aaagaagacatagttaacctagcgcgtgaaatcggcactgaagacttcgcgaagacaatg
ccagaatactgtggtgttatctctaagaagccaactgtgaaagcggtgaaaggcaagctc
gaagcagaagagcagaaattcgacttcagcatccttgaacaagtggttcaagacgctcgt
atgacggacatccgtgatatcgcgaaagagtctaagcaagcggctccagaagttgagcaa
gtacaagctgtagaagagcacgcaatcgtactggatattcgtagccctgaagaggaagac
gataactcactagaaatcgatggcgttgaagtaaaacacattccgttctacaagctgggt
actcagtttggcgatctagaccaagcgaagacatacctactgtactgtgaccgtggcgtg
atgagccgtctgcaagcgctttacttgcaagagcaaggcttcaacaacgtgaaggtttac
cgcccttaa
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