Virgibacillus halodenitrificans: BME96_07400
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Entry
BME96_07400 CDS
T04548
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
vhl
Virgibacillus halodenitrificans
Pathway
vhl00730
Thiamine metabolism
vhl01100
Metabolic pathways
vhl01240
Biosynthesis of cofactors
vhl04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
vhl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BME96_07400
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BME96_07400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vhl03016
]
BME96_07400
Enzymes [BR:
vhl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
BME96_07400
Transfer RNA biogenesis [BR:
vhl03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BME96_07400
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
ATP_bind_3
NAD_synthase
tRNA_Me_trans
IZUMO
Put_Phosphatase
Motif
Other DBs
NCBI-ProteinID:
APC48007
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Position
1427937..1429139
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AA seq
400 aa
AA seq
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MQYDHILIRYGEMALKGKNRKMFILKLQENIQHKLNDFPNVKVKRTQGRMFILLNGHQPE
PIIERCKHIFGIQSMSLAIKVENEESVIKEAALFALKKNPTIETFKITVKRINKDFPIRS
QEMNQLLGRYLLTNTDNYTVDVHQPDMEIRVEIRLEATYITSSVIKGPGGLPVGTSGKSL
LLLSGGIDSPVAGYLAMKRGVQIEAIHFHSPPFTSERAKQKVLDLTKQLTKFGKSIQVHI
VPFTKLQQEIFRTMPDGYAMTIMRRMMMRISEQVCDQQSILSLTTGENLGQVASQTMESM
NAINEVTTYPIIRPLITMDKSDIISISQEIGTYETSILPYEDCCTIFVPKSPKTKPKREK
ASHFEQKNDFSELLKEAVEGIETIKVTAKDNKKDTLDDLL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatgaccatatattgatcagatacggtgaaatggcccttaaagggaagaacaga
aaaatgtttatactaaaattgcaggagaatattcagcataagcttaatgattttcctaat
gtgaaagtgaaacgtacacaggggagaatgttcatcttattaaatggacaccaacctgaa
ccaattattgaaagatgtaagcatatatttggaattcaaagtatgagcttagccataaaa
gtggaaaatgaagaaagtgttatcaaagaggcagccttatttgctttgaaaaagaatcca
actattgaaacatttaaaataacagtaaagcggattaataaagattttccaatacggtca
caagaaatgaaccaacttttaggacgttatttacttacaaatactgataattataccgta
gatgtgcatcagcctgatatggaaataagagttgagattcgcctggaggcaacctatatc
acttctagtgttataaaaggccctggaggacttcccgtaggtacatcaggaaaatctttg
ctattactttccggagggatcgatagccctgtagctggttacttagctatgaagcgcgga
gtacagattgaggctattcatttccactccccaccttttacaagtgaaagagcgaagcaa
aaagtacttgatctcacaaaacaattgaccaagtttggtaagtctatccaagtacacatt
gttccttttacgaaattacaacaagaaatttttagaacaatgccagatggttatgcaatg
actatcatgcgtagaatgatgatgcgtattagtgaacaggtttgcgatcaacaatcgatt
ttatcgttgacaacaggtgagaatttgggtcaggttgctagtcagacaatggaaagtatg
aatgcaataaatgaagtaacaacatatccgattattagaccactaatcacaatggataaa
tcggatatcatcagcatttcccaggaaattggcacttatgagacgtcaattttaccttat
gaggattgctgcactatatttgttcctaagtctcctaaaacaaagccaaaacgtgagaaa
gcaagtcattttgaacagaaaaatgattttagtgaattattaaaggaagctgtagaagga
attgaaactataaaggtaacagcaaaggataataaaaaagatacattagatgatctcctg
taa
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