Vibrio harveyi: AL538_05225
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Entry
AL538_05225 CDS
T04380
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
vhr
Vibrio harveyi
Pathway
vhr00300
Lysine biosynthesis
vhr01100
Metabolic pathways
vhr01120
Microbial metabolism in diverse environments
vhr01230
Biosynthesis of amino acids
Module
vhr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AL538_05225 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vhr01002
]
AL538_05225 (dapE)
Enzymes [BR:
vhr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AL538_05225 (dapE)
Peptidases and inhibitors [BR:
vhr01002
]
Metallo peptidases
Family M20
AL538_05225 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
AMF97188
UniProt:
A0A3A1PV95
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All DBs
Position
1:1097104..1098240
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AA seq
378 aa
AA seq
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MTDSPVLALAKDLISRQSVTPEDAGCQEVMIERLKALGFEIEVMVFEDTTNFWARRGTEA
PLFAFAGHTDVVPAGKLEQWDTPPFEPTIIDGYLHGRGAADMKGSLACMVVAVERFIAEN
PDHKGSIGFLITSDEEGPFINGTVRVVETLMARGENIDMCIVGEPSSTEVVGDVVKNGRR
GSITGDLTVKGTQGHVAYPHLANNPVHQSLLAIHELATTEWDQGNDYFPPTSFQIPNVSA
GTGASNVIPGEFNVQFNLRFSTELSNEIIVDRVTQTLDKHDLNYDLKWTFNGDPFLTDTG
ALLDAVVAAVDEVNSTKPALLTTGGTSDGRFIARMGGQVVELGPVNATIHKVNECVKVDD
LEKLTDMYQNTLKHLLAQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagtccagtactggcactcgctaaagacctgatcagccgccagtccgtaacg
cctgaagatgcaggctgtcaggaagtaatgatcgagcgattaaaagcgcttggttttgaa
atcgaagtgatggtgtttgaagacacaacaaacttctgggctcgccgaggtacagaagca
ccactgtttgctttcgccggacacacagatgtcgtgccagcaggcaaattggagcaatgg
gacacacctccttttgaaccaaccattatcgacggttaccttcacgggcgtggcgcagca
gacatgaaaggctctctagcttgtatggtggtcgcggttgaacgctttattgcagaaaac
ccagaccataaaggttcgattggctttttgatcacttcagacgaggaaggtcctttcatt
aatggcaccgttcgcgtcgttgaaacgctcatggctcgtggcgagaacatcgacatgtgc
atcgttggtgagccttcaagcactgaagttgtgggagatgtagttaagaatggtcgtcgt
ggctcaatcacgggtgatttaacggtaaaaggaacacaaggtcacgtggcgtaccctcac
cttgctaataatccggttcatcaatcactattagccattcatgaacttgctacgacagaa
tgggaccaaggcaacgattacttcccaccgacaagcttccaaatcccgaatgtctctgct
ggtactggtgcatcgaatgtgattcctggcgaatttaacgtgcagttcaacctgcgcttt
agcacagaactcagcaacgaaatcattgttgaccgcgtgacccaaacactcgacaaacac
gatttaaactacgatctgaaatggacattcaatggtgacccgttcctcaccgatactgga
gcattgcttgacgcagtcgttgctgccgtcgatgaagtcaacagcacgaagcctgcgttg
ctcaccactggcggaacgtctgatggtcgatttatcgcacgcatgggcggtcaggtggtt
gagcttggtccggtgaacgcgactatccacaaagtgaacgaatgtgtaaaagtcgatgac
cttgagaaattaacggacatgtaccaaaacacgttgaaacacttactcgcacaatag
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