Vibrio harveyi: AL538_09065
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Entry
AL538_09065 CDS
T04380
Name
(GenBank) HDOD domain-containing protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vhr
Vibrio harveyi
Pathway
vhr05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AL538_09065
Enzymes [BR:
vhr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AL538_09065
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
HDOD
Motif
Other DBs
NCBI-ProteinID:
AMF97847
UniProt:
K5VE69
LinkDB
All DBs
Position
1:complement(1907143..1908366)
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AA seq
407 aa
AA seq
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MKNAYVARQPIFNRKRQTLGYELLFRDGESNAYPAHIDSNRATYRLIVENFLSVGTNPLI
ASSRCFINFPHQSLLRRLPRSLPKNKIVVEVLETCQPTDELLEAIRELYREGYLIALDDF
TLTDEWRRFLPYVHIVKLDIMAMGLKKACDLVKKHTKKRTKYHFLAERVETEAEFEATKE
AGFKFFQGYFFSKPEVMQTKYVSPEQVLALKLFREVCVPDPDFDRIENIITQDVTLSYKL
LRFVNTQSTTLEVTITSFRQALIYLGQEKLKMFVSLVVASYISGQKPRELYNLSLQRAQF
CEAMSRYQPFAHLNEQGFMVGLLSILDAMLDLSVESLVGQLPLSPSVQQALLHRQGEYGA
LLAIEECYERADWAGVEQFSQQLGLSVDDVKSELGEAVRWSQTFSGA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgcatatgtcgcccgccagccaatctttaaccgtaaaagacagacgctggga
tatgagttgttgttccgtgatggtgaaagtaatgcctatcctgcgcacatcgattcaaac
agggcgacataccgattgatagtagagaactttctctctgtcggaaccaatcctctgatt
gcatcttcacgatgcttcatcaattttcctcaccaaagtttgctgcgtcggctgccaaga
agcttgccgaaaaacaaaattgtggttgaggtactcgaaacctgccaaccaaccgatgag
ctgcttgaagccattcgcgaactgtaccgtgaaggctatttgatcgcgcttgatgacttc
acgttgactgacgaatggcgtcgtttcttaccgtatgtccatatcgtgaaactcgatatc
atggcgatggggctaaaaaaggcatgcgacttagttaagaagcacactaaaaagcgcacc
aaataccatttcttagctgagcgagtagaaaccgaagctgagtttgaagcgaccaaagag
gcaggctttaaattcttccaaggctacttcttcagcaagcctgaagtgatgcagactaaa
tacgtgagtcccgagcaagtgttggcgctcaagctatttcgagaagtgtgtgtccccgat
ccagactttgaccggattgaaaacatcattactcaagatgtcacgctgtcgtacaagtta
ctgcgttttgtgaatacgcaatcgaccacgttagaagtgaccatcacttcattccgccaa
gctttgatttaccttgggcaagagaagctcaaaatgtttgtctcactggtggttgcgtca
tatatctccgggcagaagccgcgcgagttgtacaacttatctttgcaacgcgctcaattc
tgcgaagctatgtcgcgctatcaaccttttgcacatctcaacgagcagggttttatggtt
ggcttgttatcgattctcgacgccatgcttgatttgtctgtggaatctttagtgggacag
ctgcctttaagtccttccgtgcagcaagccttgttgcatcgccaaggtgaatacggcgcg
ttgctggcaattgaggagtgctacgaacgtgccgattgggcaggcgttgagcaattctcc
cagcaactcggactttctgtggatgatgttaagtctgaacttggcgaagccgttcgctgg
agccagaccttttctggcgcctaa
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