Vibrio harveyi: AL538_09770
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Entry
AL538_09770 CDS
T04380
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vhr
Vibrio harveyi
Pathway
vhr00071
Fatty acid degradation
vhr00280
Valine, leucine and isoleucine degradation
vhr00310
Lysine degradation
vhr00362
Benzoate degradation
vhr00380
Tryptophan metabolism
vhr00410
beta-Alanine metabolism
vhr00640
Propanoate metabolism
vhr00650
Butanoate metabolism
vhr00907
Pinene, camphor and geraniol degradation
vhr00930
Caprolactam degradation
vhr01100
Metabolic pathways
vhr01110
Biosynthesis of secondary metabolites
vhr01120
Microbial metabolism in diverse environments
vhr01200
Carbon metabolism
vhr01212
Fatty acid metabolism
Module
vhr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AL538_09770 (fadB)
00650 Butanoate metabolism
AL538_09770 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AL538_09770 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AL538_09770 (fadB)
00310 Lysine degradation
AL538_09770 (fadB)
00380 Tryptophan metabolism
AL538_09770 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AL538_09770 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AL538_09770 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AL538_09770 (fadB)
00930 Caprolactam degradation
AL538_09770 (fadB)
Enzymes [BR:
vhr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AL538_09770 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AL538_09770 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AL538_09770 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AL538_09770 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF5546
NAD_binding_2
DAO
Motif
Other DBs
NCBI-ProteinID:
AMF97970
UniProt:
A0A454B6Z8
LinkDB
All DBs
Position
1:complement(2053825..2055996)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKEVQDGIAELSFCSPKSVNKLDLATLESLDKALDALTAHQGLKGLMLTSD
KDAFIVGADITEFLGLFAKTDAELDQWLQFANSIFNKLEDLPVPTISVLKGHTLGGGCEC
VLATDMRIGDKTASIGLPETKLGIMPGFGGCVRLPRVIGADSAMEVITQGKACRADEALK
IGLLDAVVDSDALYESALKTLTSAINEKLDWQARRKQKTSPLTLSKLESMMSFTMAKGLV
AQKAGPHYPAPMTAVITIEEGARFARNEALDIERKHFVKLAKSEEAKSLVGLFLNDQYIK
GLAKKSAKSASKDTQRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQPSLDLGMTEASKL
LNKRLSRGRIDGFKMAGILASITPSLHYAGIEESDVIVEAVVENPKVKAAVLSEVESHVG
DDTVITSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKIMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAQGFPERMGKQGRDAIDALFEADKYGQKNGNGFYSYTIDRKGK
PKKTFSEEILPVLADVCADKQDFDEQTIIQRMMIPMINEVVLCLQEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIAEFVAMAKQYSELGAMYQVPQMLIDMAAKGESFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaagtacaagatggcattgcagagcta
agcttctgctctccaaaatccgttaacaagctagacctagcgacattagagtcactcgac
aaagcccttgatgcattaacagcgcaccaaggactaaagggcttgatgctcacctcagat
aaagacgcgttcattgttggcgcagatatcaccgaattcttaggtctttttgccaagaca
gacgctgagctcgatcagtggctgcaatttgctaatagcatctttaacaagctggaagac
ttacccgtcccgactatctcggtactaaaaggtcacacgttaggcggcggctgtgagtgt
gtgcttgcaactgacatgcgaattggtgacaagaccgccagcatcggtctaccagaaaca
aaactgggcatcatgccgggctttggtggttgtgtacgtctgccacgtgttattggcgcc
gacagcgcaatggaagtgatcactcaaggtaaagcgtgtcgtgcggatgaagcgttaaag
attggtcttctggatgcggttgttgatagcgacgcactttacgagtcagcactcaagaca
ctgacctcggcaatcaacgagaagttggactggcaagctcgtcgcaagcaaaagacatca
cctctaacgctaagtaagcttgaatcaatgatgagctttaccatggcgaagggtctggtg
gcacaaaaagcgggtcctcactaccccgctccaatgacagccgttattacgattgaagaa
ggcgctcgtttcgctcgtaacgaagcactcgacattgaacgtaagcacttcgtaaaactg
gctaagtctgaagaagcaaaatcactggttggcttgttcctcaacgaccaatacatcaaa
gggcttgctaaaaaatcagcgaagtcagcgagtaaagacacgcaacgtgcggctgtgctt
ggtgcgggcattatgggcggcggcatcgcctaccaatctgcattaaaaggcgtaccggtg
ttaatgaaagacatcgcgcaaccttcactcgatttaggcatgactgaagcatctaagctg
ctaaataaacgcttatctcgtggtcgcattgatggctttaagatggctggtattttagcg
tctatcacaccaagcctacattacgcaggcatcgaagaatcagacgtgattgttgaagcc
gtagtagaaaacccgaaagtaaaagcagcagttttgagtgaagtcgaatcgcatgtcggt
gacgataccgttattacctcaaacacctcgacaattcctatcaacctgttagcaaaatcg
ctaaaacgcccagaaaacttctgtggcatgcactttttcaacccagtgcaccgcatgcct
cttgttgagatcatccgtggtgaacatacctctgatgaaaccatcaatcgcgttgttgcg
tacgcagcgaaaatgggcaaatcaccaattgtcgttaatgactgccctgggttctttgta
aaccgcgtattgttcccatactttggtggcttcagcatgctacttcgcgatggcgctgac
tttacgaaaatcgacaaaatcatggaacgtaagtttggctggccgatgggacctgcatac
ttgctcgatgttgttggtattgatactgctcaccacgcacaagccgttatggcacaagga
ttccctgagcgtatgggcaaacaaggtcgtgacgcaatagatgcgctgttcgaagcagat
aaatacggccagaagaatggcaatggcttctacagctacaccattgatagaaaaggtaag
cctaagaaaaccttctctgaagaaatcttgccggtactcgctgacgtttgtgccgataaa
caggactttgacgaacagaccatcattcaacgtatgatgattccaatgatcaacgaagtg
gtactgtgtctacaagaaggcatcattgccactccacaagaagcggatatggcactggtt
tacggtcttggcttccctccattccgcggtggcgtattccgctacctagatagcgtaggt
attgctgagtttgttgcaatggcaaaacaatactcagagctcggtgcaatgtaccaagta
ccacagatgctgattgatatggcggcgaaaggtgaaagcttttacggtgcacaacagcaa
ggttctatctaa
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