Vibrio harveyi: AL538_12910
Help
Entry
AL538_12910 CDS
T04380
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
vhr
Vibrio harveyi
Pathway
vhr00730
Thiamine metabolism
vhr01100
Metabolic pathways
vhr01240
Biosynthesis of cofactors
vhr04122
Sulfur relay system
Module
vhr_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AL538_12910
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AL538_12910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vhr03016
]
AL538_12910
Enzymes [BR:
vhr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
AL538_12910
Transfer RNA biogenesis [BR:
vhr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AL538_12910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
Dak2
HTH_Tnp_1_2
PAPS_reduct
Transcrip_reg
Motif
Other DBs
NCBI-ProteinID:
AMF98556
UniProt:
A0A454B8T8
LinkDB
All DBs
Position
1:2743482..2744930
Genome browser
AA seq
482 aa
AA seq
DB search
MKFIVKPHPEIFVKSESVRKRFTKILECNIRNIVKSRTESVAVFNRRDHIEVTSESDEFH
AEVLEILTHTPGIHHILDVKQTEFKDLHDIYEQVLELSGSLIEGKTFVVRAKRRGKHEFT
SIELERYVGGGLNQAVESARVKLSKPDVTINVEVTNDKLNQVLARHKGLGGFPLGTQEDV
LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQVSHYLWNKYGSSAKVRFI
SVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMIAQKMKIEALVTGEALGQVSSQTLTN
LRHIDNVTDTLILRPLINWDKEDIINLAREIGTEDFAKTMPEYCGVISKKPTVKAVKGKL
EAEEEKFDFSILEQVVQEARMMDIRDIAKESQEAAPEVEQVQAVEENAIVLDIRSPEEED
DNPLEIDGVDVKHIPFYKLGTQFGDLDQAKTYLLYCDRGVMSRLQALYLQEQGFNNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgtaaagccccatccagaaatttttgtaaaaagtgaatctgtgcgtaag
cgcttcacaaagattttagagtgcaacattcgtaacatcgttaagagccgtacggagtct
gtcgcggtattcaaccgtcgtgatcacattgaagtgacctctgagagtgacgagttccac
gctgaagttttagaaatcctgacgcacacgccaggtattcaccatattcttgatgtaaaa
caaactgaattcaaagacttgcacgatatctacgagcaagtgttggagctaagcggttca
ctgatcgaaggcaagactttcgtagtgcgtgctaagcgtcgtggtaaacacgaatttact
tctattgagttagagcgttacgtaggtggcggtcttaaccaagcggtagaaagcgctcga
gttaagctaagtaagccagacgtaacgatcaacgttgaagtgactaacgacaagctaaac
caagtgttggcacgtcacaaaggtctaggtggtttccctctaggtacacaagaagacgta
ctaagcctgatctcgggtggtttcgactctggtgtttctagctacctacatatcaaacgt
ggctcaaaagtacattactgtttctttaacctaggtggtccagcacatgaaatcggcgtt
aagcaggtttctcactacctatggaacaaatacggttcttcagcaaaagtacgtttcatc
tcagttgatttcgagcctgtagttgcagaaatcctagagaaagttgatgacggccaaatg
ggcgtgatcctgaagcgtatgttcatgcgtgcggcaggtatgattgctcagaagatgaag
atcgaagcattggtaacaggtgaagcgctgggtcaggtgtcgagccagacgctgactaac
ctacgccatatcgataacgtaacagatactctgattctgcgtccgctgatcaactgggat
aaagaagacatcatcaacctagcgcgtgaaatcggcacagaagactttgcgaagacgatg
ccagaatactgtggtgttatctctaagaagccaactgtgaaagcggtgaaaggcaagcta
gaagcagaagaagagaaattcgacttcagcatccttgagcaagtggttcaagaagctcgt
atgatggatatccgtgatatcgcaaaagagtcacaggaagcagcaccagaagttgagcaa
gtacaagcagtagaagaaaacgcaatcgtattggatatccgtagccctgaagaggaagac
gataacccactagaaatcgatggtgttgatgttaaacatattccattctacaaattgggt
actcagtttggtgatctagaccaagctaagacatacctactgtactgtgaccgtggtgtg
atgagccgtctgcaagcactttacttgcaagagcaaggtttcaacaacgtgaaggtttac
cgcccataa
DBGET
integrated database retrieval system
