Viridibacillus sp. JNUCC-6: JNUCC6_02930
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Entry
JNUCC6_02930 CDS
T06874
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
vij
Viridibacillus sp. JNUCC-6
Pathway
vij00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JNUCC6_02930 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vij01007
]
JNUCC6_02930 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vij03016
]
JNUCC6_02930 (lysS)
Enzymes [BR:
vij01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
JNUCC6_02930 (lysS)
Amino acid related enzymes [BR:
vij01007
]
Aminoacyl-tRNA synthetase
Class I (A)
JNUCC6_02930 (lysS)
Transfer RNA biogenesis [BR:
vij03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JNUCC6_02930 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DUF6400
Motif
Other DBs
NCBI-ProteinID:
QOV11750
UniProt:
A0A7M2QWS6
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All DBs
Position
complement(610397..611953)
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AA seq
518 aa
AA seq
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MHWAYQIAERLIQKYPTKEVFTCASGISPSGSVHIGNFREIVTTFFVVKALESMGKKTRF
IFSWDDFDRLRKVPQNVASSYERYIGMPYSDVPNPFGKGSYASHFEKEFEHSLLAFDIEP
QFIYQNIEYRSGRYIQFIRTALKKRLEIYDILMRFKSSSPIKEERATFYPITLYCHVCNK
DTTTITSFNAELEIFEYECTCGIKGFQALSDSNNIKLNWKVEWAMRWMVEDVVFEPGGRD
HSSATGSYNVSKVIAKEIFDYKAPDYAAYEFIGLKGTNQKMSSSSGNVITPNELLNVYTP
ELILFMFAKYNPNAAFNIGLDEDVLRNYSEYERYLSSYIQGLLKDEHLIHSLKLAGANRS
MKQPNFSQVASVFSLIGFNTNLLHITLSQTGEKYTVEEITRISHRVAHWMNDWNPNRLVS
INDEKNTLYYNNLPELQQEKVKQLAGLLAIEPTLSGDALMKNIYAICHQDDKKRMLEYQK
DLFRNVYQLVMNENSGPRLPLLISAVGSEKIIELLTFS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcattgggcatatcaaattgcagaaagattaattcagaagtatcccacaaaagaggtt
tttacttgtgcttcagggataagtccttcaggttccgttcacattgggaattttcgtgaa
atagtaacaactttttttgttgtaaaagcattagaaagtatgggaaaaaaaacacgattc
attttttcttgggatgattttgatagactaaggaaagttccacaaaatgtagcttcatct
tacgagaggtatattggtatgccttattcagatgttccaaacccttttggtaaaggatct
tatgctagtcattttgaaaaagagtttgaacactcattactagcatttgatatcgaaccc
caatttatatatcaaaatattgagtatcgctctggacgatatatacaatttatacgaact
gcattaaaaaaacgtctagagatttatgacatacttatgcggtttaaatctagctcccct
ataaaagaagaacgtgcaaccttttatccaattacattgtactgtcatgtttgtaacaag
gatacgactacaataacctcttttaatgcagaacttgaaatttttgaatatgagtgtact
tgtggaattaaaggatttcaagctttatcagatagcaacaatataaagctcaactggaaa
gtagaatgggcaatgcgctggatggtagaggatgttgtatttgaaccaggggggcgtgat
cattcctctgctacaggaagttataatgtatccaaagttatagcaaaagaaattttcgat
tataaagcgcctgactatgctgcatatgagtttataggattaaaaggcacaaaccaaaag
atgtctagctcatctgggaacgttattacaccaaatgaattgttaaatgtctatacacca
gagcttattctatttatgtttgcaaaatacaaccccaatgctgcttttaatatcggttta
gatgaggacgtattacgtaattattcagagtatgaacggtatctatcctcttatattcag
ggcttactaaaagatgaacacttaatacattccttaaaattagcaggagcaaatagatca
atgaagcaaccaaactttagccaagtagcaagtgttttctctttaattggttttaacacc
aatttattacacataactttaagtcaaacaggtgaaaaatatacagttgaagaaataaca
cgtatcagccaccgagtagctcattggatgaacgattggaatcctaatcggttagtaagt
attaatgacgaaaaaaatactttgtactacaataatctacctgaactacaacaagagaaa
gtgaaacagcttgcgggtttactcgcaattgaacctactttatcaggcgatgctttaatg
aaaaatatttatgccatctgtcatcaggatgacaaaaaaagaatgctcgaatatcagaaa
gacttatttagaaatgtttatcagctagtgatgaatgaaaatagtggtcctcgattacct
ttgcttattagtgcagtgggaagtgaaaaaataatagaattgcttactttttcttaa
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