Viridibacillus sp. JNUCC-6: JNUCC6_07025
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Entry
JNUCC6_07025 CDS
T06874
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18104
ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:
7.6.2.2
]
Organism
vij
Viridibacillus sp. JNUCC-6
Pathway
vij01501
beta-Lactam resistance
vij02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JNUCC6_07025
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JNUCC6_07025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vij02000
]
JNUCC6_07025
01504 Antimicrobial resistance genes [BR:
vij01504
]
JNUCC6_07025
Enzymes [BR:
vij01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
JNUCC6_07025
Transporters [BR:
vij02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JNUCC6_07025
Antimicrobial resistance genes [BR:
vij01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
JNUCC6_07025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_29
SMC_N
AAA_23
RsgA_GTPase
Sigma_reg_N
ABC_ATPase
AAA_16
AAA_5
nSTAND3
AAA_30
MMR_HSR1
AAA_14
AAA_15
AAA_22
AAA_7
GTP_EFTU
Rad17
G-alpha
Motif
Other DBs
NCBI-ProteinID:
QOV12498
UniProt:
A0A7M2QXJ1
LinkDB
All DBs
Position
complement(1420598..1422331)
Genome browser
AA seq
577 aa
AA seq
DB search
MKRLFVNYVRPLWKPIIIGLALSLVSTLLMVSQPLVMKNLINTLTGGQTTSFIRNVTLLI
SIPILATVISYIQTYFLSGIGQKISQKLREDTFQSMLNQPTEYLDKNSAGSMYQNVQDSI
IVGDGYIDYELVPAILSVFTLLLTFGSMLLLDIPISLIILAFSLLTVLLTAMTGTKVKEV
ESKYRGARIGSADFLQEVLANVRTVRLFTNRDREIANWKKWLEIDRGFWMKRRLISDLNV
NGILIFIQSLCLSIVIIYGYIRVQNDLLSLGSIVAFIAYVPMVFQSVSSLQRAQLGTKKV
KIVLNQIYTLLDSQSENPKNKGKTVEDKALEIEFKNVDFHYPDRQEGLIDINFTAKQNST
TLIVGPSGVGKSTIIDLLTCLYYPNKGEVSIAGKPTVDWNKDELRKQIGIVPQNVVIWNR
TLRENLLYGISNAHQISPERIDEVIRITRLESFVKKLPDGLEEVLGPNAVQASGGERQRI
ALARALLRNPAILIFDEVTSALDPILSAEITELIWSKELVSTKIIVSHRLSFASRVDQIL
VVDTDGTITCGKHTDLKDNHALYNQLVMADEFQDIPE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgtctattcgttaattatgttcgaccattatggaaacccattataataggatta
gctttatctttagtatccacactacttatggtttcacagccactcgtcatgaagaatctt
attaatacacttactggtggacaaacgacttctttcattaggaatgttactctacttata
tctattccaatattagctactgtaatctcctatattcaaacgtatttcctatctggcatt
ggccaaaaaatctcacaaaaactccgtgaagatacatttcaaagtatgttaaatcaacca
acagagtatctggacaaaaattcagctggaagcatgtatcaaaatgtacaagactctata
atagttggcgatggctatattgattacgagctggttccagccatattatctgtttttacg
ttactcttaacttttggatccatgctgttgctcgatatacctattagcttaattatatta
gcattttcactactaacagttttattaacagcgatgacagggacgaaggttaaggaggtt
gaaagtaaatatagaggtgcaagaataggtagtgcggattttcttcaagaagtgttggca
aacgttagaacagtgcgtctttttactaatagagatagagaaattgcaaattggaagaag
tggttggaaatagatcgtggtttttggatgaaaagacgactaatttcagatttaaatgta
aatggtatattgatttttattcaatcgctctgtttaagtattgtcattatttatggatac
ataagagttcaaaatgatttgctaagcctcggcagtatcgttgcttttatagcatatgtc
cctatggtttttcaatctgtgtcaagtttacaaagagcacaactcggtacaaaaaaggtg
aaaattgtactaaatcaaatttatactttacttgattcgcaatcagagaatcctaaaaac
aaaggtaagactgtggaagataaagctttagaaatcgagtttaaaaacgtggattttcat
tatcctgaccgtcaagaaggattaatagatattaattttaccgcaaagcaaaattcgact
accttgattgttggcccaagtggagtagggaaaagtacaataattgatttactcacttgt
ttgtactatccaaataaaggtgaagtaagcattgcaggtaaacctactgttgattggaac
aaagacgaattacgtaaacaaattggaatcgtaccccaaaacgttgtcatttggaaccgt
actttaagagaaaatctcttgtatggcatatcaaatgcgcatcaaatatctcccgaacga
attgatgaagtaattagaatcactcgattagagtcatttgtgaaaaaattgcctgatggt
ttagaagaggttcttggcccaaacgctgttcaagcttcgggtggggaacggcagcggatt
gcactggcacgtgcattgttgagaaatccagctattcttatatttgacgaggtaacatct
gcattagaccctatactaagcgcggaaatcacggagttgatttggagtaaggaactggtc
tcaactaaaatcattgtcagccatcgactatcttttgcttcacgagtggatcaaattctt
gtcgtagacactgatggaaccattacatgtggtaaacatacagacttaaaagacaatcac
gctctttacaatcaattagtaatggcagatgagtttcaagatattccagaatga
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