Viridibacillus sp. JNUCC-6: JNUCC6_17480
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Entry
JNUCC6_17480 CDS
T06874
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
vij
Viridibacillus sp. JNUCC-6
Pathway
vij03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JNUCC6_17480 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vij03021
]
JNUCC6_17480 (rpoE)
03400 DNA repair and recombination proteins [BR:
vij03400
]
JNUCC6_17480 (rpoE)
Transcription machinery [BR:
vij03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JNUCC6_17480 (rpoE)
DNA repair and recombination proteins [BR:
vij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JNUCC6_17480 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
ColG_sub
Mnd1
DUF4777
Motif
Other DBs
NCBI-ProteinID:
QOV10358
UniProt:
A0A7M2QRA5
LinkDB
All DBs
Position
3535373..3535915
Genome browser
AA seq
180 aa
AA seq
DB search
MNFREMTKEQLSEESFIDLAYGILDSKKQPLTFPELMKEIQTIKGCTDAEVKERLQQFYT
DLNIEGRFIVLGENRWGLREWYAIEQIEEETAPTVKVRKKKAKAVIDDEDELELEEEELD
FDENFDEFVEDPTEEDEEEEEFEDVAIDDIDEDLDEDLLEEEDEFEIDEEDDELEEEEEE
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
ttgaactttcgtgaaatgacaaaagaacaactatcagaagaatcgtttatcgatttagca
tacggaattttagattcaaaaaaacaaccattaactttcccagaactgatgaaagaaatc
caaacaataaaaggttgtactgatgcagaagtaaaagagcgcttgcaacaattttataca
gaccttaacattgaaggtcgctttattgtactaggtgaaaaccgttggggacttcgcgag
tggtatgcaatcgaacaaatcgaagaagaaacagcaccaacagtaaaagtacgcaagaaa
aaagctaaagctgtaattgacgatgaagatgaacttgaacttgaagaagaagaattagac
ttcgatgaaaacttcgatgaattcgttgaagatccaactgaagaagatgaggaagaggaa
gaattcgaagatgttgcaatcgatgatatcgatgaagaccttgatgaagacttgcttgaa
gaagaagatgaattcgaaattgacgaagaagatgatgagttagaagaagaggaagaagaa
taa
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