Varroa jacobsoni: 111262812
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Entry
111262812 CDS
T07417
Name
(RefSeq) serine/threonine-protein kinase SMG1-like
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
vja
Varroa jacobsoni
Pathway
vja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111262812
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vja01001
]
111262812
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111262812
Enzymes [BR:
vja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111262812
Protein kinases [BR:
vja01001
]
Serine/threonine kinases: Other
PIKK family [OT]
111262812
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111262812
mRNA cycle factors
Common to processing body (P body) and stress granule
111262812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
SMG1
FATC
FRB_dom
HEAT_2
HEAT
Motif
Other DBs
NCBI-GeneID:
111262812
NCBI-ProteinID:
XP_022693109
LinkDB
All DBs
Position
Unknown
AA seq
2441 aa
AA seq
DB search
MSGSRRQRNDNDYEARQSSELETYLQGLGSGSGRYDRMTDSKIELIHSNCSSQPATRRLF
QKHAMALATQLSSYLLNCPSDDTSRSYVTHILTYVAKILIDEESSQLQGYLGVLANNVDM
PGDLCKISILNAITKISKYLWKKRLLSMGSEVLLPKLFEILESTDNPVVLKPLIEGFLYY
ANDSSIFKGYFRDVSDILIGWHIDGSAGQELASFMASSLTTMAPYFSVDSDFSVSLIKQF
QEDIASFTASILNGQSGVVDKLCSILLVMTNIANAIQNQVDIQVDAEEVMQNLLTVQRFL
KDSCSLLSFLTEANVMCSSMTVLMSRSADICSFLTLQLNDAPQFQIHTRYLEALLNLTSL
VISSTTNGQVHMTIMEAMFSPTGALYKLRSNKSVQIQESFVRVSRDIMALKDVPLVQAGF
QYLASDLRSPNVKVALAAVGALQGMSETKNSLISLLAVRPSLFELLHSLVGDPVVEERVQ
PEILRLLRVHSITHTHFVVNSDLIEPSTSATANHFNMILQLFTKHLPDGGYIGILVLDWL
DELIFNPTVTAYGEQLASAPVMTALVAAVVDVILKQWKNPYSERALNILTGLLKLEGWSF
GEPTLSEVRKLAKLGSADKQILAVLDITGEDSDDLVERYDWQAGDPIAFKKFMLYVSGQS
DKLSDTLLSRLYMKCEGDGSSSVPCSSVLWAWLAWQSAQHLVHGKLKSYLGKPQDSLGFI
ESVLKSSLDEHRGCVMLKFMDALERCMYQAYECTVTISNNYEKQCRAFFRANRNTCQEWL
QRVRPFVAKLSITRCQHPLAVWQLESFFDNKLTLNSDQISFFASLYTKAVIELKAPNRLL
GFAHFLSTNFTLSESLSQWLKASSQHAGQKLETALRSYEKLKLKDNPILTEMVKDQVESC
RRSLKICDDITQWDELKLKNFVSRQRKKSNFNLAFEALRRFESTIDETLVLTEMTAEARG
AYRFSSGLCNRQYSKLVRALDGPSAAVAVLSEGQAGDAESLVGLARVLTAGGVQNLSMGI
TSEGHHQWRVGLLLSQACQQKPDYAKAYFKFADWSYYCGKRDIDSGDTQIAAVEQKLISS
VLTPLGVAHLSTPMCSVIGRIEYCDSGNCGCTSKKQKILALLEAESVPEPGLSQACDHLL
SVELAVQSRVFRHYHSALDAYFHFLRLSPAGNDAAQAEATLRLLRLIVKHAHSLQDTLEG
HMATNIVTEPWHAIIPQLFARLNHPEEYVRRTLVRLIARIGESGALRLVAYPAIVGEQAA
HQEDRLANIRRLQQDPSQELSQSMAESSDEENDALEVEEMDDASKRCYAEICASLRRDNG
AQMSEIELFVREMERVSVLWEEKCLAALTQHYPQLNQPGGTQMCTDLLKDLIQMTLLSPA
ETPHEEWFQKNFSGPLNKTLDTFQNCKDPEILKKAYKALCATVNVKIQEDVRSQLAMSTI
SPRLAGLRNTLLPVPGQNRATVASVASTVTLLPTKSKPKKFALIGDDGVRYTFLFKGLED
LHLDERIMQFLSISNRILSKRFGQNSYLARSYAVTPMGRRSGLIQWIDRSVPLFALYKRH
QIAKQGYATRPTEMFYSKLIPKLNKANIPTDKRREWPKELLMQVVEELTKETPGDLLLRE
VWAACATPGQLWARQNALVHSVAVTSIVGYIIGLGDRHLDNILVDIHSGHIIHIDYNVCF
ERGTQLRVAERVPFRLTPILSRALGLNGLNGVFQVAAENILRTLRANRETLLTLLEAFVY
DPLVDWTVGGPTSVTKAASITAECAVTQLVALCEEDGFQQNLMKVERELRVIWNQLTANV
VEWRDNAIALADKTALITALQECPTVFQDLASLRLQFSELCKAVQDTTAMLASYCEQEHC
PNPLFRLMAGYFSQTTSLWAQWLMHVCTQVDGPSIQQTLTRFQAKTVVSQQQLTSDLSYL
AQKLSVCDVEHDDGLGGALSASVLHPRVLYTLTESPAAQRLIGMLDNFKIDVLPRLLAFS
DFDVVNSPLVPVVGEGMELLSSMVATAEYEVIADRLEAEYEAVIAAAASQRQQTTFSVAT
PVSGVDSTSTTAASSVTGTALQPLLLVMDSLFGELRFIDKLQLIHGLFTAVQSAVTGGVS
RLEAACGVIESLMIAPLLLTEASPEMSATGEERATVTARIPIERVVVDHQIITALMGLVQ
SVSEEPIFELPTIESVLDNIGNGSEADLCIRADLQDAVGRTRAAVLEVTNAGMAMLSNPS
YARVAAKPGVASELAAVGIEVTNLKDALLDSISQQVQVLQAQVQRYWHPIGMALVDADVK
LQELVDLTASVRHAEPTEFLLKNANWPQLSFNPVQVCFDTVGQFNNTCQFALRSFAGGQP
GQIDLPMLHEASSQIGEIFHAVQQLVERLLAYKVVEIESKREEQRNRQGMLIWRRVRAKL
EGRDTHDKSHLTVGQQLEKVIHEATSMENLALMYEGWTPWV
NT seq
7326 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtctcggagacagcgcaacgataatgattatgaagccaggcagagttcagaa
ctggagacttatcttcaaggccttggtagcggttcgggacgatatgatcggatgacagat
tcgaaaatagaactcatccatagtaactgcagcagtcagccggcgacccgcagactgttt
cagaaacatgcaatggctttggctacccaactgtcatcgtaccttctcaactgtccatcg
gatgacacgtcaagatcgtacgtcacgcacatcttgacgtacgtggcgaaaattctcata
gatgaggaatcgtcacagctccagggctaccttggcgtacttgctaataatgtcgacatg
cccggcgacctttgcaagatttccatcttgaatgccatcacgaagatttcgaagtatctg
tggaagaaacgtcttctttcaatgggttcagaagttctactccccaaattgttcgagatc
ctcgaaagcaccgacaatccagtcgttttgaagcccctaattgaagggtttctctattac
gctaacgattcgtcgatcttcaagggatatttcagagacgtgtcggatattttaatcggt
tggcatattgatggttcagctggccaagagttagcatcgtttatggcgtcatcgttaact
acgatggcgccgtacttttccgttgactctgacttttcagtctcgctgatcaagcagttc
caggaggacatcgcttcatttactgctagtatcctgaatggtcaaagcggtgttgtggac
aaactatgctcgatcctgctcgtcatgacgaatatagccaacgctattcaaaatcaggtg
gatatccaagtggatgcggaggaggttatgcagaatctacttacggtgcaaaggttctta
aaggattcgtgtagtcttctttcatttttgacggaagccaacgtgatgtgctcctcaatg
acagtgttaatgagtcgttccgcggacatctgttcgttcctaacgcttcagttgaacgat
gcgccccaatttcaaattcatactagataccttgaagcgctccttaaccttacatcactt
gtgatcagttcaacaacaaatggacaagttcacatgacaatcatggaagctatgttttca
ccaaccggcgcattgtacaagcttcgcagcaataagagtgtgcagatacaggaaagtttc
gtccgcgtcagccgagacattatggctctgaaagatgtacctcttgtacaagccgggttt
cagtatcttgcaagtgaccttcgtagtccaaatgtcaaagtagctttggcagccgtcggt
gcgcttcagggaatgtccgaaacaaaaaattctctcatttcattattagcggtaaggcca
tcgctatttgaacttctccattcgttagtaggagatccagttgtcgaggagcgcgttcaa
cctgagatcctccgtcttttacgagtgcactcaatcacccatacgcacttcgttgtgaac
tctgaccttattgagccgtcaacttccgccacagcaaatcactttaatatgattctccag
ctttttacaaaacaccttcctgatggtggatacataggtatattggtgctcgactggttg
gatgagttgatattcaacccaacagtaaccgcttacggggagcaattagcttctgcaccc
gtgatgacagcattagtggctgcagttgtcgacgtgattcttaaacagtggaagaaccct
tactcagaacgtgcgctgaacatcttgacgggtcttctcaaactcgaaggatggtccttc
ggagagccaacgttgtctgaggtgcggaagttagcaaaactcgggtcagcagacaagcaa
attttagccgttttggatatcaccggtgaagatagcgacgatttggttgaacgttacgat
tggcaggcaggagacccgatagcgttcaaaaaatttatgttgtacgtttctggacaaagc
gacaagttgagcgatacgttattgtcgcgcctctacatgaaatgtgagggggatggttcc
tcgtcagttccgtgttccagcgtactttgggcttggcttgcttggcagagtgcacagcac
cttgtgcacggaaagctcaaaagttatctgggcaaacctcaggactcgctggggttcatc
gaatctgtcctaaagagttcacttgatgaacatcggggctgtgtaatgttaaagtttatg
gatgcactcgaacgctgtatgtatcaggcttacgaatgtacagtaacgatcagcaataac
tacgaaaagcaatgccgggctttctttcgcgcaaatcgcaacacctgccaggagtggttg
caaagggtaaggccgttcgtggctaagctgtcgattacgcgatgtcaacatcctttggcg
gtctggcaactcgaatcattctttgacaacaagctcaccttaaatagcgatcagatcagc
ttctttgcttcgctttacacgaaagctgtcatcgaactgaaagcgccgaatcgactgctg
ggttttgctcactttttgagcacaaactttacgctatctgagagtctcagtcaatggtta
aaggcgagctcgcagcatgccggccaaaagctcgaaactgcccttcgaagttacgaaaaa
ttgaagctgaaggataatcccattctaacggagatggtcaaagaccaagtggaaagctgc
cggaggagcttaaaaatttgcgacgatattacccagtgggacgaattgaagctcaagaac
tttgtgtcacgacagcgcaagaaatccaatttcaatcttgcctttgaggcactacgaagg
ttcgagtcgacaatcgacgaaacacttgtcctaacggagatgaccgcagaagcccgcggt
gcttaccggttctcgtcgggtctttgcaatcgccagtacagcaaattggttcgagcactt
gacggaccttctgcagctgtcgctgttttatcagaaggtcaggctggcgatgcagagtct
cttgtcggtttggctcgagttctcactgccggcggagtccaaaatttgtcaatggggatt
acaagcgagggacaccatcaatggagggtaggtctgttattaagccaggcgtgccaacag
aagccggattacgctaaagcctacttcaagtttgcggattggtcctattactgcggcaag
agagacatcgactccggcgacacacagatagctgctgttgaacaaaagctgatctcctcg
gttctgacgcctttgggtgttgcacacttgtccacgccaatgtgttcggtcattggccga
atcgaatattgtgattcgggaaattgtggatgcacatcgaagaaacaaaagatccttgca
ttactcgaggctgaatctgtgcccgagcctggattgtcgcaggcatgcgatcatcttctt
tcagttgagttggccgtacaatcccgtgtgttccgtcattaccacagcgcattggatgcg
tattttcacttcttacgattgagtccggcaggcaacgatgcggctcaggccgaggcgact
ttgcgacttttacggctaatcgtcaagcatgctcactcattacaagacacacttgaaggt
catatggcgactaacattgtcacagaaccgtggcatgcaattattcctcagttattcgcg
cgacttaatcatcctgaagagtatgtacggaggacacttgtgcgcctaatagcacgtatt
ggggagagtggagcattgcgactagttgcctatccagcgatcgtcggtgagcaagctgct
caccaggaagatcgactggcaaatatccgtagacttcaacaggatcccagccaagaactt
agtcaaagtatggcggaatccagcgacgaggaaaatgatgcgctggaggttgaagagatg
gacgatgcgtcaaaacgctgttacgctgaaatatgcgcttctctacgacgggataatgga
gctcagatgagtgaaattgaattattcgtaagggagatggagagagtatccgttctttgg
gaagaaaaatgcctagcagcactaacgcaacactacccacagttaaatcaacccggtgga
acccagatgtgcacggatttactgaaggacctaatccaaatgacgctgctatcgccggca
gaaacacctcatgaagaatggttccagaagaacttttcgggaccccttaataagacactc
gacacattccagaactgtaaagatccagaaattctgaaaaaagcttacaaggcattatgt
gcaacagtaaatgttaagattcaggaggatgtacggtcccagttggccatgtcaacaatc
tctcctcgtttggcgggcctcaggaataccttacttcccgtgccgggacaaaaccgagcg
acagttgcgtctgtggcatcaacagttactctattgcccaccaaatcaaagccgaaaaag
tttgcgctcattggagatgacggcgttaggtatacgttcctgttcaaaggtttggaggac
cttcatcttgacgaaaggattatgcagttcctttcaatctctaatcgtatcttgtcgaag
cgattcggccaaaactcctatttggcccgtagctacgcagtcactccgatgggacgccgt
tcgggtcttatacaatggattgatcgttcggtgccgctgtttgcactgtacaagaggcac
cagattgccaagcagggctatgcaaccaggcctaccgaaatgttctatagtaaattaatt
cccaaactcaataaggccaacattcccaccgataaacggcgcgaatggccaaaggaactt
cttatgcaggtcgtcgaagagctgacaaaagaaactccaggcgatttgctgctgcgcgaa
gtctgggcagcctgtgccaccccaggccaactctgggctcgtcagaacgcccttgtgcat
agtgttgctgtcacgtcgattgtcggctacattatcggattgggggatcgacatctagac
aacattcttgttgatattcattcaggccatattattcacatcgactacaatgtctgcttc
gagagaggaactcaactgcgggttgccgaacgggtgcctttccgtctaactccaatactc
agtcgagcccttggtttgaacggtctcaatggagtattccaagtagctgcagaaaacatc
ctccgaacgctgagagctaaccgcgaaaccctactcacacttcttgaagcctttgtctac
gatcctctcgtagactggactgtcggtggaccaacatctgtaactaaggcggcgtcgata
acggccgaatgcgctgttactcagcttgtggctctctgcgaagaggacggttttcagcag
aatctaatgaaggtggaacgagaactccgagttatctggaatcaacttactgcaaacgtc
gtcgagtggcgggataatgccatagcattggctgataagacagcgctcattacagcattg
caggaatgcccaacggtatttcaagatcttgcctctctacggttgcagttctccgaactc
tgcaaagcggttcaggacacgacggccatgctagccagctattgcgaacaagaacactgc
ccgaaccccttattccgcctaatggcagggtatttctctcagacgacctcactctgggca
caatggctcatgcacgtttgcactcaagtcgacgggccgagcattcagcagactctgacc
cgttttcaagcgaagaccgttgtatctcaacagcagctaacatcggatctctcgtacctt
gcgcagaaattgagcgtatgcgatgttgaacacgatgacggtctaggcggcgctttgtcc
gctagtgttttacatccgcgcgttctctacactttaactgagtctcccgcagcccaacgt
cttattggaatgcttgataactttaaaatcgacgtcctaccccggttattggctttttcc
gacttcgacgttgtcaactcaccacttgtacccgtcgtgggcgaaggaatggagcttctg
tcgagtatggtagctaccgccgagtacgaagtgattgcagacaggcttgaggccgagtat
gaggctgttattgctgccgcggccagtcagcgtcagcagacaacgttttctgtagccaca
ccggtatccggtgttgacagtacctccacaacagctgcttcttcggttacgggaactgct
ctacagccactactgcttgtaatggactcgctgttcggagagctccgttttattgacaaa
ctgcaattgatccatggactattcacagctgtacagagcgctgtgacggggggtgttagc
cggcttgaagcggcgtgtggggtaatcgagagtttgatgatcgcgcctctcctcttaacg
gaagcttcgccagaaatgtcggcgactggtgaggaacgagcaacggtaacagcaagaatt
cccatcgagcgcgttgttgtagaccatcaaataatcacggcgttaatgggactggtgcaa
agtgtctccgaggaaccgatctttgagttgccaacgatcgaatcagttctggataacatc
ggtaatggcagtgaggcagacttgtgcattcgagctgacctccaagatgctgttggtcga
actcgggcggccgttcttgaggtgacgaatgctgggatggcaatgttgtccaatccgtcg
tacgctcgggtggcagccaagccaggggtcgccagtgagcttgcagctgtcggcattgag
gtcactaacctaaaagacgcccttctggactctatttcccagcaggtgcaggtccttcag
gcacaagtgcagcgatattggcaccccatcggaatggcgttggtcgacgcagatgtaaag
cttcaggagcttgttgacctaacggcctcggttcgccacgctgagcccaccgagttctta
ctgaaaaacgcgaactggccacagctgtcgttcaatcccgtccaggtatgttttgataca
gtcgggcagttcaacaatacttgtcagtttgcgttgcgttcgttcgcgggtggccagccg
ggacaaattgacctgccaatgttacatgaagcgtcgtcgcagattggagaaatcttccac
gccgtacagcaactggtagagcgactgcttgcatacaaggtagttgagatcgaaagcaaa
agggaagagcagcgtaatcgtcagggcatgctaatatggagacgcgtccgcgctaaactt
gagggtcgggacacacacgacaaatcgcacctgactgtcggacaacaactcgagaaggtt
atccacgaggctacatcgatggagaacctagcccttatgtacgaaggatggacgccttgg
gtctga
DBGET
integrated database retrieval system
