Varroa jacobsoni: 111264877
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Entry
111264877 CDS
T07417
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vja03016
]
111264877
Enzymes [BR:
vja01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
111264877
Transfer RNA biogenesis [BR:
vja03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
111264877
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Fer4_NifH
TraT
SPL
Motif
Other DBs
NCBI-GeneID:
111264877
NCBI-ProteinID:
XP_022696853
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MVVDPGEKKSHQCIDDIEDLNFGDLERPQPRESVVPKVIRRNGIVAREKFSGDSFVPGHQ
KIWVKTWGCSHNSSDSEYMAGMLTAAGYPLVNDKFEAQLWLLNSCTVKSPSEEHLKNTIN
KALEEGRKVVVAGCVSQADPKAEFLSGLSVIGVHQTDRVVEVVEETLKGNSVRLLGTKSI
KGRKLGGSYLDLPKIRRNPFVEILAINTGCLNHCTYCKTKMARGNLGSYPIEEIVERCRQ
SFREGVKEIWMTSEDTGAYGRDIGVTLPDLLRQVIKEIPEGCRLRLGMTNPPYIMDHLEE
IAEILLHPRVYSFLHVPVQSGSDPVLKEMRREYTRVQFCQLVDYLRKHVPGITIATDIIC
GFPTETEQDFDETMSLCAKYGFPTLYINQFYPRPGTPAARMKRIPTDIVKNRTRRLTQLF
DTVLPYENRVGREYDVLVTEIAADKKHFVGHNKFYEQILVPARDEYMGANLRVKVVETGK
HFMKADVIIMIRPAERIPTVSVQMIIPVVIVCTLVALITVKVLIQR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggttgttgacccaggggagaagaaaagccaccaatgtatagatgatattgaggatttg
aactttggcgatttggaaaggcctcaaccacgggagagtgttgtgccaaaagtgatccgt
cgaaacggaatcgtagcacgagaaaagtttagcggagacagctttgtacccggtcatcaa
aagatatgggtgaaaacgtggggctgctcccacaattcttccgactcggagtatatggca
gggatgctgaccgcggccggatatccccttgtcaacgacaagtttgaagcacagctctgg
ttactcaatagttgcactgtaaaaagtccttcagaggagcacttaaaaaacaccatcaac
aaggcgttggaagaaggcagaaaagtggtcgtggcaggttgtgtctctcaagcagatccg
aaagccgagtttctatctggtttaagcgtcattggggtacatcagacggaccgggtagta
gaggtggttgaggaaactctcaagggaaattccgtcaggcttctcgggacaaaatctatt
aagggtcgcaagcttggcggatcctatttggatctaccgaaaattcgtcgtaaccctttc
gtcgaaatactcgctataaatactgggtgtctaaatcattgcacgtattgcaagaccaaa
atggctcgcggtaatttgggcagctatccaatagaagaaattgtggaacgctgccgacaa
agttttcgggaaggcgttaaggaaatctggatgaccagtgaggacacaggagcatatgga
cgagatatcggcgtaactcttccagatcttctgcgtcaggttatcaaggaaatccctgaa
ggctgccggcttcgcttaggaatgacgaatccaccatatattatggatcacctcgaagag
atcgcggagatcctgctccatcctcgagtatattcgttccttcatgtacccgtacaaagc
ggtagcgatccggtgctcaaggaaatgcgccgagaatacacaagagttcaattctgtcag
ttagtggactaccttcgcaagcatgtgccaggcattaccatcgctactgatatcatatgt
ggctttcccacagagacagaacaagatttcgatgagacaatgtcgctttgcgcaaagtac
ggttttccaacgctgtacattaatcagttctaccctcggcccggtacacccgctgcacgc
atgaaaaggattccaacggatattgtgaagaaccgtacgcgaaggttgacccagctgttt
gataccgtattgccatatgaaaacagagtgggacgagagtacgatgtacttgtaacagag
attgctgcagataagaagcatttcgtcggacacaataaattctatgagcagatacttgtt
ccggctagagatgagtatatgggagctaatttgagggtgaaagtcgtagaaacaggtaaa
cacttcatgaaggcagatgtgattataatgatcagaccagcagagaggattcctaccgta
tcggtccagatgattatacccgttgtaatcgtgtgcacgctcgtcgcactaataacagta
aaagttctgatacaacgctaa
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