Varroa jacobsoni: 111271554
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Entry
111271554 CDS
T07417
Name
(RefSeq) Fanconi anemia group J protein-like
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
vja
Varroa jacobsoni
Pathway
vja03440
Homologous recombination
vja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111271554
03460 Fanconi anemia pathway
111271554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vja03400
]
111271554
Enzymes [BR:
vja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
111271554
DNA repair and recombination proteins [BR:
vja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
111271554
FA (Fanconi anemia) pathway
Downstream FA components
111271554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
Motif
Other DBs
NCBI-GeneID:
111271554
NCBI-ProteinID:
XP_022708173
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
MKQYTHPLAGIRVRFPYEHPYPQQRVIMCRLITALKQHKNCLIECPTGTGKTLSLLCGAL
SFVEEQKRLREEAAKKLCSSSSLTSAAHDHSALHMGYTPTSNEDVAGTVLDMYEDLEKQD
EVRGIVKIHAPSSRKSLLNDSSKVTGVLKAKLKGLAIEDKRNADQLPKVPKIFYGTRTHR
QVSQVVAEFNRTDYGKMRMTILGSRDRMCINKKILRRGHGESGEVSVNEECRALMKLARQ
DQGCIFYSQLQKVPRSVYPTLFGQGLGDPWDIEDLKGVGQERTLCPYYWSVQLAETADIT
FCPYNYILDPTVRKAVQINLSGNIVILDEAHNIEDICRDSMELELNLSDVLYIEEFIETA
LRNGKESRAMAQVLPTVGALKHVLLNESAAATLTKPQVFDHEKLCGTLEIAQVGPMTWSR
TKKIVEELLNADDDISSPATDSGKTSEGIQDLDARCKSVFGALANTLEHLYKMDMKYTSC
FRAAVLKKIPKDKHKELSGKPEVTLNIYCLNSAVGLVDIKDTLHSLVIASGTLSPMKSIQ
CELDVPFPISISLNHVVAEGQIFACVSTRGPERVELKCDYKNSMGFTLQDDLGRALVQIC
SRIPNGVLCFFPSYSTMKRMCERWQITGTWSKMEQLKRVFVEGQSKLPEMMREYYEESLT
PQGALLMAVCRGGVSEGEDFPDKFARAVVIIGLPFPNIKDITIKDKMAFNDRRHRQGEDV
MTGQDWYSAQAFRALNQALGRCIRHSNDWGAIILLDSRVSYNARYKDMLCRWVRDRIVEV
NDFNALDNRLGEFVLERRVENEMGDTSHSRNLESSCTERELTKLQSGLGLSRSKNVCLSD
LNSSSSGSETPPKQTYKMFPIFQLKRKRRSCESSATDRRAVGETSACSNRDFEILEINSQ
IRSGPFEVARLNDSKMPRLSITSIVIEDSPAKYPVSAASSASGSITSKTSNESEVDNDDD
VYITQRHSRTNEATKMRIATQNDGVDDENSSDLFSD
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtatacacatccactggcgggtataagggttcgattcccctacgagcaccct
tatcctcaacaacgggtgatcatgtgtcggctaataacagcattgaagcagcataaaaat
tgtctgatcgaatgtccgactgggacgggcaagaccctttcacttttgtgtggggcgttg
agttttgttgaggagcagaaacgccttcgggaagaggcggcgaagaaactatgttcgtcg
tcgagcctaacgtcagctgcgcatgatcactctgctcttcacatgggatacacaccaact
tctaacgaggatgtagcgggaactgtgttggacatgtacgaagatttagagaaacaagat
gaggtacgtggaatagtgaaaattcatgcgccatcaagcagaaaatcgcttctcaatgac
tcttcaaaagtcactggtgtcctgaaagccaagttgaagggtttagcaatcgaggataag
agaaatgcggatcagcttcctaaagtgccgaaaatattttatggtactcgaacgcatcgg
caggtgagtcaagtggtggccgaatttaaccggacagactacggaaaaatgcgcatgaca
atattgggcagtcgagaccgaatgtgtatcaataagaaaatactccgaaggggccatgga
gaatctggtgaagtcagcgttaacgaggaatgccgagctcttatgaagcttgcccgccag
gatcaagggtgtatcttttactcacaacttcagaaggttccacgctccgtatacccaacg
ctgttcggtcagggccttggcgacccatgggatattgaggatctaaagggagtaggccaa
gagcgtactctctgtccatattactggtctgttcaactggcagagacggcagacatcact
ttttgcccgtacaattacattcttgaccccacagtgcgaaaggctgtgcagatcaatcta
agtgggaacatcgttatcctcgatgaggctcacaatatagaagacatttgtagagactca
atggagttggaacttaacctctcagatgttttatatatagaagagttcatagaaacggca
ctgaggaacggtaaagagtcacgtgccatggcacaagtacttcctactgtgggggcgctt
aaacatgttttgcttaacgaaagcgcagcggccacgttaacaaagcctcaagtattcgat
catgaaaagctgtgcggaacgctcgagattgcccaagttggtccgatgacgtggtcacgg
accaaaaaaatcgttgaagaacttttgaacgcggatgacgatatctcgtctccagccact
gatagtggtaagacttcggagggaatacaagatcttgacgcaagatgtaaaagcgttttt
ggagctctcgcaaatacgcttgagcatctttacaagatggatatgaagtacacgtcatgt
tttcgagcggctgttttaaaaaaaatccccaaagacaaacataaagaactgagtggcaag
cctgaggtgaccttgaacatctactgccttaattcggctgtaggtttggtagacatcaaa
gacacgctgcactcgctcgtgattgcgtctggaaccctaagccctatgaagtcgattcaa
tgtgaacttgatgtgccattcccaataagtatttcgttaaatcacgttgttgctgagggc
caaatatttgcatgtgtctccacccgagggccggaaagggtggagctaaagtgtgattac
aaaaatagcatgggcttcactttgcaagacgacctaggacgagctctggtgcaaatttgt
tcaagaataccgaatggagtactgtgtttttttccctcatacagtacaatgaaaagaatg
tgcgagcggtggcaaatcacaggcacatggtccaagatggagcagctaaagcgagtattc
gttgagggtcagtctaaactgcctgaaatgatgcgagaatattatgaggaatcgctcacc
ccgcaaggcgctttgctcatggccgtttgcaggggcggtgttagcgaaggtgaggatttt
cccgataaatttgcacgagctgttgtgattattggtctgccgtttccaaacattaaagat
attaccattaaggataagatggcgtttaacgatcgtcgtcaccggcagggcgaagatgtc
atgacggggcaggattggtatagcgctcaagcatttcgtgcccttaatcaagcgttgggc
cggtgcatccggcattcgaacgactggggcgcaattattctactggatagccgcgtttca
tacaatgcgcgatataaagatatgctctgtcgttgggttcgagatcgtattgtagaggtg
aatgatttcaatgccttggacaatcgtctcggcgaattcgttctagaacgtagggtagaa
aatgaaatgggcgacacgagtcattcaaggaatttagagagcagttgcacagaacgggaa
ctaacgaagctgcaaagcggattaggattaagtaggtcgaagaatgtttgtttatctgac
ttgaatagcagctcaagcggcagcgaaacgcctcctaagcaaacgtataaaatgtttccg
atttttcaattgaaaagaaaaaggcgttcgtgcgagagctcggctacagatcgtcgcgct
gttggcgaaacatcggcgtgctccaatcgagatttcgaaattctagaaatcaactcccag
attagaagtgggcccttcgaagttgctcggttgaatgactcaaaaatgccacgactgagt
atcacttcgattgtcatcgaagattcacccgcgaaatatcccgtctcggcagcttcatca
gcaagtgggtccataacatccaagacaagtaatgagagtgaggtcgataatgatgatgac
gtttatattacacaaaggcattcaagaacaaatgaagcaacaaagatgcgtattgcaacc
cagaacgatggcgtggatgatgaaaattcctctgatctattctccgactaa
DBGET
integrated database retrieval system
