Vibrio japonicus: NP165_00440
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Entry
NP165_00440 CDS
T08510
Symbol
ubiD
Name
(GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
vjp
Vibrio japonicus
Pathway
vjp00130
Ubiquinone and other terpenoid-quinone biosynthesis
vjp01100
Metabolic pathways
vjp01110
Biosynthesis of secondary metabolites
vjp01240
Biosynthesis of cofactors
Module
vjp_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
NP165_00440 (ubiD)
Enzymes [BR:
vjp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
NP165_00440 (ubiD)
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GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
UUM30695
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Position
1:95681..97537
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AA seq
618 aa
AA seq
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MSFKDLRDFIAHLEQQGKLKRISHPVDPNYEMTEISDRTLRAGGPALLFENPIGYDMPVL
TNLFGTPERVAIGMGRSDVKELREVGKLLAYLKEPEPPRGFKDALEKIPVFKQVLNMPAK
RLRKAPCQEIVWQGDDVDLDKIPVMSCWQDDVAPLLTWGLTVTRGPHKKRQNLGIYRQQK
IAKNKIIMRWLAHRGGALDLRDWMETNPGKPFPVSVAFGADPATILGAVTPVPDTLSEYA
FAGLLRGSKTEVVKSISNDLEVPASAEIVMEGYIDPNEFADEGPYGDHTGYYNEKEKHHV
FTITHITMRKDPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIEDFYLPPEGCSY
RMAVVTMKKQYPGHAKRVMLGVWSFLRQFMYTKFVVVCDESVNARSWDDVIKAMTENMEP
VRDTLMIENTPIDSLDFASPVVGLGSKMGMDATIKWDAENVTAPELTDGPKIDITTEQLE
VLKAQHPEIIDVALPVSAGHDRFAIVSMHKTQAHQSKQVLSDVWEFLDQFTDAKFVILCD
QDVNVHDWNDVIWAMTTRMDPARDTLQIPAKDGRSSKLGLDATNKFSGEVEREWGIPIKK
DPQLVAQVDEKWSKLGLS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaggatttacgcgactttattgcccaccttgaacagcaagggaaactaaag
cgcatctctcaccccgttgaccctaactatgagatgacagaaatcagcgatcgcactctt
cgtgcgggtgggcctgcattactattcgaaaatccaatcggatacgatatgccagtgcta
accaatctatttggtacacccgagcgagtagcaataggtatgggtcgcagtgacgtcaaa
gaactccgtgaagtggggaagttgctcgcttatctcaaagagcctgagccgccacgcgga
tttaaagatgcattggaaaaaatcccagtgtttaagcaagtcttaaacatgccagccaaa
agattgcgtaaagcaccgtgtcaggagatagtttggcaaggtgatgacgttgacctagat
aaaattccggttatgagttgctggcaagacgacgttgctcctctgctgacatggggattg
accgtaactcgtggtccgcataaaaagcgccagaacttaggcatttaccgtcagcaaaaa
attgccaagaacaaaatcatcatgcgttggcttgctcaccgtggtggagcgttagaccta
cgtgactggatggaaaccaatccaggtaagccatttccagtatctgttgcattcggtgct
gatccagcgaccattcttggtgcggtaacgccagtaccagataccttgtcggaatacgca
ttcgcaggattgctacgtggtagtaaaaccgaagtggttaaatccatcagtaacgatcta
gaagtacccgcaagtgcagagatcgttatggaaggttacatcgacccgaatgaatttgcc
gacgaagggccgtatggcgatcacactggttactacaatgagaaagaaaagcatcacgtc
tttaccattacgcatatcaccatgcgtaaagacccaatttaccacagtacatacacagga
cgcccacctgatgagccagctgttttaggcgttgcacttaacgaagtcttcgtgcctatt
ttgcaaaagcagttcccggaaattgaggatttttatcttccgccagaaggctgctcttat
cgtatggccgttgtgacgatgaagaagcagtatccgggccatgcgaagcgagtcatgctg
ggtgtatggtctttcctacgtcaattcatgtataccaagtttgttgttgtgtgtgatgaa
agcgttaatgctcgtagctgggatgatgtcatcaaagccatgacagagaatatggaacct
gtacgcgataccttgatgattgagaatacgccgatcgattcattggattttgcttctccg
gttgttggtcttggctcaaaaatgggtatggacgcaacgattaaatgggatgcggaaaat
gtgactgctccagaattaactgacggtccaaagatcgatatcactacagagcaactagag
gtgcttaaagctcagcacccagagatcattgacgtagcgctacctgtatctgctggtcat
gatcgctttgcaatcgtatcaatgcacaaaacacaagctcatcaatcaaaacaggtatta
agtgatgtttgggagtttttagaccagttcaccgatgcgaagtttgtcattctttgcgat
caagacgtcaatgttcatgattggaatgacgtgatttgggcgatgaccacccgtatggac
cctgcacgtgatacgttgcaaattcccgcaaaagacggtcgaagctctaaacttggtcta
gatgcaaccaataaattttctggagaggttgaacgtgagtggggcattccgattaagaaa
gatcctcagctcgttgcgcaggtagacgagaaatggagtaagctggggttatcatga
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