Varanus komodoensis (Komodo dragon): 123031925
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Entry
123031925 CDS
T07701
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123031925 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vko03021
]
123031925 (POLR1A)
Enzymes [BR:
vko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123031925 (POLR1A)
Transcription machinery [BR:
vko03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
123031925 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
123031925
NCBI-ProteinID:
XP_044303358
Ensembl:
ENSVKKG00000016516
LinkDB
All DBs
Position
Unknown
AA seq
1709 aa
AA seq
DB search
MAAAREVPWRRLTCLSFGMYTGVEIRKLSVKPITNPVFLDNAGTPSTNGLYDLSLGPLDN
KEVCATCVQDFNHCPGHLGHIELPLTVYNPLFFDKLFLLIRGSCMSCCHLTCPRATIHLL
LNQLKLLKIGLLQAVHELEAVLSRFLEDNAGTCGADIEEMLSLKTEEMLQNNQLRDQGAH
VKNVCDCRNKLISQFWKSHMNSRRCPNCKAGRSLVRKEHNSKLTVTYPTVVLQKSGEQTI
VEEAATIEETQLGKRGFMTPTTAKQHIEALWKNEGFFLCKLFSGMTVTGDSSFNPDMFFL
DKLVVPPSRYRPMSCVGDQMFANGQTVNLQAVMKDANLIRKLLAFMAQEQCQSKQTEEEN
LKMMEQQPLEPLDHSVLVTIPGQSPADKLYNIWIRLQSHVNILFDSDMDKLISEKYPGVR
QILEKKDGLFRKHMMGKRVDYAARSVICPDMYIQTNEIGIPMVFATKLTYPQPVTPWNVQ
ELRQAVINGPNQHPGASMIINEDGSRTVLSITSQTQREAIAKQLLTPSTGAPKPGIKIVC
RHIKNGDVLLLNRQPTLHRPSIQAHRARVLPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QNELGRAEAYILACTDEQYLVPKDGKPLAGLIQDHMVSGTSMTTRGSFFTREQYVELVYQ
GLTDKKGKVKLLPPSIIKPQTLWTGKQVVSTVLINVIPEDHAPLNLSGKAKIGAKAWMTV
PASRMYGPDLDFMCESQVLIRNGELLCGVLDKAHYGSSAYGLVHCCHEVYGSETSGKVLT
ALARLFTAYLQFYKGFTMGVEDILVKSRADRKRCKIITESTLCGTKAIKAAFNLPLSASC
EEVRSKWQDAHLHKDQRDFNMVDLKFKEEVNHHSNEINKVCMPLGLHRSFPENNLQLMVQ
SGAKGSTVNTMQISCLLGQIELEGRRPPLMTSGKSLPCFQPYDFSPKSGGFVTSRFLTGI
KPSEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLIVHYDLTVRDSDGSVIQFLY
GEDGLDIPKTPFLQPKQFPFIADNHKVMEKSKHLKEILSKMDHQQANTQFGLIKRWQVKH
QQPLMRREGGFLLFSQKKMAGIKAQIATGELVNGRDPATLQLLKMWYELSEKNRNKYQKK
AAKCPDPSLAVWRPDICFASVSEIFENDVESFLGEWDIQDRCSYSKSELSSQRLKDLLHL
KWQQSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASAN
IKTPMMSVPVLNTKKAHKRVKRLKKQLTRVCLGELLQKVDIREALCLEGMLNKHRIYTIK
FSLLPYECYREEKCLKPKDILHYMESRFFKILLETIKRKSSKLASYNTVSTRRALQRDLE
VVEEGGASLESKDDYEAEAEEQERVPDGEIGEGDADASDVKSKAKQEEEVDYESDDDKEG
DDDDIPDQEEAALHESNPESLATQDETYAPLSSQQAQDDKKSSDELEEHRVKAVLESHDA
IESYAYDINNELWCEVSLKLPITKEYFDLAALVTTLANSVVIQETRGITRCFLNTTSNKN
GETILTMQTEGINLPELFQYVEIFDVNRLYCNDIHAMASTYGIEAALRVLQKEIKDVFSA
YGIAVDPRHLSLVSDYMCFEGIYKPMNRYGMQSNSSPLQQMTFETSFKFLKEAAMLGSYD
ELQSPSACLVVGKVVKGGTGLFDLKQPLK
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgagggaggtgccgtggcggcggctaacctgcttgtcgttcgggatgtat
acaggcgtggagatacggaaactgagtgtaaaacctataaccaacccagtttttctggat
aatgctggcacaccttcaacaaatggattgtatgatttgtcgttgggaccacttgacaac
aaagaagtgtgtgctacgtgtgtgcaggacttcaaccactgcccaggtcacctgggtcat
atagaactgccacttactgtctataatcctctcttttttgataaattattccttttgata
cgaggttcttgtatgagctgctgccatttgacatgtccacgtgccacaattcatttactg
cttaatcagctgaagctcttgaaaattgggttgcttcaagcagtccatgagcttgaggcc
gtcttaagtaggtttttagaagacaacgcaggcacatgtggtgcagacattgaagaaatg
ttaagtttgaagacagaagaaatgcttcagaataaccaactaagagaccaaggtgcccat
gtaaaaaatgtatgtgattgtagaaataaacttatttcccagttctggaaatcacacatg
aattcaaggagatgtccaaactgcaaagcgggaagatcacttgtccgaaaagagcacaat
agcaaactcaccgtgacttaccccactgtggtactccaaaagtcaggcgaacaaacgata
gtggaggaagctgcaaccatagaagaaactcagctaggaaaacgaggcttcatgacacct
actactgccaaacaacacattgaagctttgtggaaaaatgaaggatttttcctttgcaag
cttttttctggcatgacagtcactggtgattcaagtttcaatcctgatatgttcttccta
gataaacttgttgttccaccttctaggtatcgacctatgagttgtgttggagaccagatg
tttgcaaatggtcaaacggtaaacttgcaagctgttatgaaggatgcaaacttgattcga
aagcttttggcttttatggctcaagaacaatgtcagtccaagcaaactgaagaggaaaac
ctcaagatgatggaacagcaacccttggaacctctagatcattctgtcctggtgacaatc
ccagggcagtctcctgcagataagctatacaacatttggattcgcctgcagagtcatgta
aatattttgtttgacagtgacatggataaattaatatctgaaaaataccctggtgtgcgt
cagattctggagaaaaaggatggtctgtttcgtaagcacatgatgggaaagcgagtggat
tatgctgctcggtcggtcatttgtcctgatatgtacattcagaccaatgaaattggtatt
cctatggtatttgctaccaaactgacctatcctcaacctgtgactccctggaatgttcag
gaattgaggcaagccgttataaatggacccaaccagcaccctggtgcttccatgattatc
aatgaagatgggtctcgcacagtattgagcataactagccagactcaaagggaagccata
gccaaacagctcctaactccttccactggggcaccaaagccagggataaaaattgtgtgc
cgccatattaaaaatggagatgtccttctgctgaatcgacagcccaccctccataggccc
tccatccaagctcatcgagcaagagttctgcctggagaaaaggttctgaggcttcactat
gccaactgcaaagcttacaatgctgatttcgatggtgatgaaatgaatgctcacttccct
cagaatgagcttggccgagcagaagcttatattctggcctgtactgatgagcagtatctt
gttcctaaggatggaaaaccattggcagggttgatccaagatcacatggtctctggtacc
agcatgaccacacggggctccttctttacccgagaacagtatgtggaacttgtataccaa
gggctgacagacaaaaaaggaaaagtaaagcttctccctccatccattataaaaccacag
acattatggacaggaaagcaggttgtttctacagtgctaattaatgtaattccagaggat
catgctccactgaatttatctgggaaagctaaaattggtgcaaaagcctggatgacagta
ccggcttctagaatgtatggaccagatcttgattttatgtgtgaatctcaggttttaatt
agaaatggagagttgctctgcggagtcttggataaagctcactatggtagttctgcctat
ggtttagttcactgctgccatgaggtctatggtagtgagaccagtggaaaggttttgact
gctttggctcggctctttactgcctacttacaattctacaaagggtttacaatgggagtt
gaagatattttggtcaaatcccgggcagaccgcaagagatgcaagatcatcactgaaagt
actctctgtggtacaaaggctattaaagctgcttttaacttaccactatctgcctcatgt
gaggaggtccgaagcaaatggcaggatgcccatcttcacaaagatcagagagattttaac
atggttgatctgaaattcaaagaggaagttaaccatcacagcaatgaaattaacaaggtg
tgtatgcctcttggacttcaccggagttttccagaaaataatttgcagttgatggtgcaa
tcaggagccaaaggctctactgtgaatactatgcagatttcatgcctgctgggtcagatt
gagttagaaggtcgaagacctccactgatgacatctggtaaatcactgccgtgtttccag
ccatatgacttttcccctaaatcaggaggatttgtaacaagtagatttctcactggaatt
aaaccttcagagttcttcttccattgtatggctggtagagaaggtctagtggataccgct
gtcaaaaccagccgatctggataccttcaaaggtgtatcataaaacatttggaagggctg
atagttcattatgacctgacggtgcgagacagtgatggcagtgtgattcagtttctctat
ggagaagatgggctggatatccccaagacaccattcttgcaacccaagcagtttcctttc
attgcagataaccacaaggtgatggagaaatcaaagcacttaaaagaaattctatcaaaa
atggaccatcagcaagcaaacacacagttcgggttgatcaagagatggcaagtcaagcac
caacagcctttgatgagaagggaaggaggctttttgctgttttcccagaaaaaaatggct
ggtataaaagcacagattgctacaggagaacttgtaaatggtcgggatcctgcaactcta
cagctgttgaagatgtggtatgaattgagtgagaagaataggaataagtatcaaaagaag
gcagcaaaatgtcccgatcctagccttgctgtctggcgaccagacatctgttttgcatct
gtgtcagaaatatttgaaaatgatgtagaaagcttccttggagagtgggacattcaggat
cgttgcagctacagcaaatctgaactttcttctcaaagattaaaggacttgctgcattta
aaatggcaacaatcactctgtgacccaggagaagctgtgggtcttcttgctgctcaaagt
attggggaaccttccacacagatgacattgaacacctttcatttcgctggaagaggggaa
atgaatgttacactaggtatcccaaggttgcgtgagatcctaatggtagccagtgctaat
attaaaacccctatgatgagtgttcctgtacttaataccaagaaagcacacaagagggtg
aaaaggctcaagaagcaacttaccagagtgtgcttaggcgagctgttacaaaaagttgac
atcagagaggctctgtgtttggagggtatgctgaacaagcaccgtatctacaccattaaa
tttagtcttttgccatatgaatgctatcgggaagagaaatgtttgaagccaaaggacatt
cttcattatatggaatcaagattctttaaaatcttgctggaaactattaaaaggaaaagt
tcgaagttagcatcttataacactgtcagcactcgaagagcactccagagggatttagaa
gttgttgaggaaggtggtgcatctctggaaagcaaggatgactatgaagctgaagctgag
gaacaggagagagttcctgatggtgaaataggtgaaggggatgctgatgcttcagatgta
aaaagcaaagcaaaacaggaagaggaggttgattatgagagtgatgatgataaagaaggg
gatgatgatgacatcccagatcaggaagaggctgcattgcatgaaagcaacccagagtca
cttgcaactcaggatgagacttatgctcctttgtccagtcaacaagctcaggacgacaag
aaaagttctgatgaattggaagaacacagagttaaagctgtactggaaagtcatgatgct
atagagagctatgcatatgacatcaacaatgaattgtggtgtgaggtttcactgaagctt
cctataacgaaggagtactttgatcttgccgcactagtgacaactctagcaaacagcgtg
gttatccaagagacaagggggatcacacgatgtttcttaaatacaaccagcaataagaat
ggagaaacaatactcactatgcaaactgaagggataaaccttccagaactgttccagtat
gtagaaatttttgatgtaaacagactttattgcaatgacattcatgcaatggccagtacc
tatggcattgaagctgctttgagagttcttcagaaagaaattaaagatgtgttttctgca
tatgggatcgctgtagaccctcgacatctctctctggtgtcagactacatgtgttttgaa
ggcatttataaaccaatgaatcgctatgggatgcagtccaattcatcccccttacagcaa
atgacatttgaaacaagcttcaagtttttgaaggaagcagccatgctgggctcctatgat
gaactacaatctccttctgcatgcctggtggtaggaaaagtggtaaaaggaggaactggc
ttgtttgatctcaagcaacctcttaaataa
DBGET
integrated database retrieval system
