Vagococcus luciliae: G314FT_12490
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Entry
G314FT_12490 CDS
T09015
Symbol
rpoE
Name
(GenBank) putative DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
vlc
Vagococcus luciliae
Pathway
vlc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vlc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G314FT_12490 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vlc03021
]
G314FT_12490 (rpoE)
03400 DNA repair and recombination proteins [BR:
vlc03400
]
G314FT_12490 (rpoE)
Transcription machinery [BR:
vlc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G314FT_12490 (rpoE)
DNA repair and recombination proteins [BR:
vlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G314FT_12490 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
UUV99090
LinkDB
All DBs
Position
1279216..1279821
Genome browser
AA seq
201 aa
AA seq
DB search
MEIKAFEGVNKNELSMIEVAHAILNQRGDIIDFSDLVNEIQNYLEKADSEIRDILPQFYT
DLNIDGSFISLGDNRWGLRSWYPIDSIDEEVSGVDDDEEETPRRKKRKKVNAFIAMDDDA
IDYNDDDPEDLDLVDHDEDDDELYEDEEDETKEIKEYTTDLSEIGADNDVDDDVPEGVEE
DLTIVEEDDLYDNDDEEDEEL
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
ttggaaattaaagcttttgaaggcgtaaataaaaatgaattgtcgatgattgaagttgca
catgcaattttaaatcaacgtggagacattattgattttagtgatttagtaaatgaaatc
caaaactacttagaaaaagcagatagtgaaattcgtgacatcttgccacaattttataca
gacttaaatattgacggaagttttatttctttaggagataatcgttggggcttacgtagc
tggtatccaatcgattcaattgacgaagaagtttctggtgtggatgacgatgaagaagaa
acaccacgtcgtaaaaaacgtaaaaaagttaatgcgtttatcgcaatggatgacgatgcc
attgattataatgatgatgatccagaagatttggacttagtcgatcatgatgaagatgat
gatgagttgtatgaagatgaagaagatgaaacaaaagaaatcaaagaatacacaactgat
ttatcagaaatcggtgctgacaatgacgttgatgatgacgtgccagaaggtgtagaagaa
gatctaaccatcgttgaagaagatgatttatacgacaatgatgatgaagaagacgaagaa
ttataa
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