Vibrio lentus: ISX51_00615
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Entry
ISX51_00615 CDS
T09020
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vle
Vibrio lentus
Pathway
vle00540
Lipopolysaccharide biosynthesis
vle01100
Metabolic pathways
vle01250
Biosynthesis of nucleotide sugars
Module
vle_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ISX51_00615 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vle01005
]
ISX51_00615 (rfaD)
Enzymes [BR:
vle01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
ISX51_00615 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vle01005
]
Core region
ISX51_00615 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
ThiF
NAD_binding_10
NAD_binding_4
adh_short
KR
Phage_T7_Capsid
TrkA_N
NmrA
Motif
Other DBs
NCBI-ProteinID:
WGS60816
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Position
ED252-c1:124202..125143
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AA seq
313 aa
AA seq
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MIIVTGGAGMIGSNIVKALNEAGHNDILVVDNLKDGKKFKNLVDLDITDYMDRDDFLTQV
MAGDDFGHIEAVFHEGACSATTEWDGKYMMLNNYEYSKELLHYCVEREIPFLYASSAATY
GETDAFIEEREYEGALNVYGYSKQQFDNYVRRLTADAAAHNETLPQIVGFRYFNVYGPRE
QHKGSMASVAFHLNNQMNAGENPKLFAGSETFKRDFVYVGDVAAINLWFLENGASGIFNL
GTGNAESFEEVAKAVIKHHGKGEIETIPFPEHLKGAYQEFTQADLTKLRSTGCDIEFRTV
ADGVAEYMKLVNA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaacgggtggtgctggcatgattggcagcaatattgttaaggcgctcaat
gaagcgggccacaacgatattctagtcgtcgacaacttaaaagatggtaagaaatttaag
aaccttgtagacctagacatcactgattacatggatcgtgatgattttctaactcaggtt
atggctggtgatgatttcggccatattgaagcggttttccacgaaggagcatgctctgct
actactgagtgggatggcaagtacatgatgcttaacaactatgagtactcaaaagagcta
cttcattactgtgttgagcgtgaaattcccttcctatatgcctcttccgctgcaacgtac
ggtgaaactgatgctttcattgaagagcgagaatacgaaggtgccttgaatgtctacggc
tattcaaaacaacaatttgataactacgttcgtcgcctaaccgcggatgcagcagcgcat
aacgaaacgcttccacaaatcgttggcttccgttatttcaatgtttatggtccacgcgag
caacacaaaggcagcatggcctctgtagcatttcacttaaacaaccaaatgaatgccggt
gaaaaccctaagttgttcgcaggtagcgaaaccttcaagcgtgattttgtgtatgttggc
gatgttgcggcgataaacctatggtttctagaaaacggtgcttcaggtattttcaaccta
ggtacaggtaacgcagagtcttttgaagaagttgcaaaagcagtaatcaagcaccacggc
aaaggtgaaatcgaaacgattcctttccctgaacatttgaaaggcgcttaccaagaattc
actcaagctgacttaacgaagcttcgcagtactggttgcgatatcgagtttagaacagtg
gcagatggtgtcgctgagtacatgaagctcgtaaacgcataa
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