Vibrio lentus: ISX51_03235
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Entry
ISX51_03235 CDS
T09020
Name
(GenBank) HDOD domain-containing protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vle
Vibrio lentus
Pathway
vle05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vle00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
ISX51_03235
Enzymes [BR:
vle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
ISX51_03235
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Gene cluster
GFIT
Motif
Pfam:
HDOD
EAL
AAA_14
Motif
Other DBs
NCBI-ProteinID:
WGS61296
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Position
ED252-c1:662945..664165
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AA seq
406 aa
AA seq
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MTATYVARQPILNRKKNTLGYELLFRDGERNAYPAHIESNRATYRLIVENFLSVGLNPSI
PSSRCFINFPYQSLIRRLPLSLPKDKVVVEILETCQPTDELLEAVKELHQAGYMIALDDF
TSTPEWERFLKYTHIVKLDIMQMGLDEACELVRKHEGKKFSFLAERVETEQEFQQAKEAG
FRFFQGYFFSKPEIVKTKYISPEQVIAMELFQEVCKANVDFKRVENIVAKDVALSYKLLR
FVNSMSPRLEVTISSFRQALVYLGQEKLKMFVSLAVASYVSDKKPKELYSLSLQRAQFCQ
RMSRYQPFSGHAEQAFMIGLFSSLDALLDLSLENLVEQLPLSKTIKVALLRREGPYGTLL
ALEESFEHADWQQIDKHCAQLGLNVEQVKTELTEAQRWSHNVTNQL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctacctacgttgctagacaacctatcttaaatcgcaagaagaacacgcttggt
tatgagctgttgtttcgcgacggagaaaggaatgcctatcctgcgcatattgagtctaat
cgtgcaacgtatcgtttgattgttgagaacttcttgtcggttgggcttaacccttcgatc
ccatcttcacgttgttttattaatttcccttatcaaagcctgattcgccggttgcctttg
agcttgccaaaagacaaggtcgtggttgagatccttgaaacctgccaaccgacggacgaa
ttgctcgaagcggtaaaagaattgcatcaagcgggctatatgattgccttagatgatttt
acttcaacgccagaatgggaacgtttcctaaaatacacacatattgttaagctcgatatc
atgcagatgggcttggatgaagcgtgtgaactggtaagaaaacacgaagggaagaagttt
agctttcttgctgagcgtgtcgaaaccgaacaagaattccaacaagccaaagaagcgggc
ttccgtttttttcaagggtacttcttcagtaagcctgaaatagtcaaaaccaagtacatt
agcccagagcaggtgattgctatggagctatttcaggaagtatgtaaagccaatgtcgat
tttaaacgagttgaaaatatcgtggccaaagatgtggcgttgtcatacaagcttttacgc
ttcgtaaattccatgtcgccgcgtcttgaagtgacgatctcttctttccgtcaggccttg
gtttatctggggcaagaaaaacttaaaatgtttgtttcgctggcggtggcttcttatgtg
tcagataaaaagccgaaagagttatacagtttatcgcttcagcgtgctcagttctgtcag
cgcatgtcccgctatcagcctttttcagggcatgctgaacaagccttcatgattgggctg
ttttcgtcgctcgacgccctgttagatttatcgctagaaaacttggttgaacaactcccg
ctgtcaaaaaccatcaaggtcgctttgttacgcagagaaggaccatacgggacgctttta
gcgcttgaagagagctttgaacatgcggattggcaacagattgataagcactgtgctcaa
ttaggtctgaatgttgaacaggtcaaaaccgagctcaccgaagcccaacgctggagtcat
aacgtaaccaaccagctctga
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